| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is mdxG [H]
Identifier: 73541893
GI number: 73541893
Start: 2439280
End: 2440101
Strand: Reverse
Name: mdxG [H]
Synonym: Reut_A2206
Alternate gene names: 73541893
Gene position: 2440101-2439280 (Counterclockwise)
Preceding gene: 73541894
Following gene: 73541892
Centisome position: 64.1
GC content: 60.46
Gene sequence:
>822_bases ATGGCTGATACGAGCGATCGCGCCACATGGTGGCGCCCTGCGTTCCTGCTGGTCTACCTGCTGTTCGCCATCCTGCCGAT CTACTGGATGGTGAACATGTCATTCAAGACCAATGAGGAAATCCTGTCGACGCTGTCGCTATGGCCGGCGGCGTTCACGC TCGAGCACTACCAGACCATCTTCACCGATGCGTCGTGGTACTCGGGCTACATCAACTCGCTGATCTATGTGGCAATGAAC ACGGTGATCTCGATTACCGTGGCGCTGCCTGCGGCTTACGCGTTCTCGCGCTACCAGTTCATCGGCGACAAGCATGTGTT CTTCTGGCTGCTGACCAACCGCATGACGCCGCCGGCGGTGTTCCTGCTGCCGTTCTTCCAGCTCTACAGCACCATCGGGC TGATGGATTCACACCTGGGCGTGGCACTTGCGCACCTGGTGTTCAACGTGCCGCTTGCGGTGTGGATTCTCGAAGGTTTC ATGTCGGGCGTACCGCGTGAGATCGATGAAACCGCCTATGTCGACGGGTATCCCTTTCCACGTTTCTTCCTCACGATCTT CCTGCCGCTGATCAAGGCTGGTGTCGGGGTGGCGGCGTTCTTCTGCTTCATGTTCAGCTGGGTCGAACTGCTGCTCGCGC GCACGCTGACGTCGGTCAACGCCAAGCCGATCGTGGCGACTATGACGCGCACGGTTTCGGCGTCGGGCATGGACTGGGGC GTGCTGGCCGCTGCCGGCGTGCTTACGATCGTGCCCGGTGGCATCGTGATCTGGTTCGTGCGCCACTACATCGCGAAGGG CTTCGCGATGGGCCGCGTGTAG
Upstream 100 bases:
>100_bases GCATTCTCGATCGTCTACTTCCTGATCATCCTGCTCCTGTGCTTCGTCCTCTATAACTGGATGCAGCGCGCGGGCACCGC CGGCAGCGAGGACATGCCCC
Downstream 100 bases:
>100_bases TGCAGTTGCCGACGGAAAGGAGATCGCCATGCTGAGCTGGATGGTCTGGACCACGCCCGTGGCCGTGTTCTTCGCCTGCA TCGTCGTCATGCTGCTCGGC
Product: binding-protein dependent transport system inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MADTSDRATWWRPAFLLVYLLFAILPIYWMVNMSFKTNEEILSTLSLWPAAFTLEHYQTIFTDASWYSGYINSLIYVAMN TVISITVALPAAYAFSRYQFIGDKHVFFWLLTNRMTPPAVFLLPFFQLYSTIGLMDSHLGVALAHLVFNVPLAVWILEGF MSGVPREIDETAYVDGYPFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGMDWG VLAAAGVLTIVPGGIVIWFVRHYIAKGFAMGRV
Sequences:
>Translated_273_residues MADTSDRATWWRPAFLLVYLLFAILPIYWMVNMSFKTNEEILSTLSLWPAAFTLEHYQTIFTDASWYSGYINSLIYVAMN TVISITVALPAAYAFSRYQFIGDKHVFFWLLTNRMTPPAVFLLPFFQLYSTIGLMDSHLGVALAHLVFNVPLAVWILEGF MSGVPREIDETAYVDGYPFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGMDWG VLAAAGVLTIVPGGIVIWFVRHYIAKGFAMGRV >Mature_272_residues ADTSDRATWWRPAFLLVYLLFAILPIYWMVNMSFKTNEEILSTLSLWPAAFTLEHYQTIFTDASWYSGYINSLIYVAMNT VISITVALPAAYAFSRYQFIGDKHVFFWLLTNRMTPPAVFLLPFFQLYSTIGLMDSHLGVALAHLVFNVPLAVWILEGFM SGVPREIDETAYVDGYPFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGMDWGV LAAAGVLTIVPGGIVIWFVRHYIAKGFAMGRV
Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=276, Percent_Identity=26.4492753623188, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790464, Length=209, Percent_Identity=24.8803827751196, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789860, Length=234, Percent_Identity=23.0769230769231, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30699; Mature: 30567
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTSDRATWWRPAFLLVYLLFAILPIYWMVNMSFKTNEEILSTLSLWPAAFTLEHYQTI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FTDASWYSGYINSLIYVAMNTVISITVALPAAYAFSRYQFIGDKHVFFWLLTNRMTPPAV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHH FLLPFFQLYSTIGLMDSHLGVALAHLVFNVPLAVWILEGFMSGVPREIDETAYVDGYPFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHH RFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGMDWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHH VLAAAGVLTIVPGGIVIWFVRHYIAKGFAMGRV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADTSDRATWWRPAFLLVYLLFAILPIYWMVNMSFKTNEEILSTLSLWPAAFTLEHYQTI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FTDASWYSGYINSLIYVAMNTVISITVALPAAYAFSRYQFIGDKHVFFWLLTNRMTPPAV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHH FLLPFFQLYSTIGLMDSHLGVALAHLVFNVPLAVWILEGFMSGVPREIDETAYVDGYPFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHH RFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGMDWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHH VLAAAGVLTIVPGGIVIWFVRHYIAKGFAMGRV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]