| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yejA [C]
Identifier: 73541817
GI number: 73541817
Start: 2348206
End: 2350089
Strand: Reverse
Name: yejA [C]
Synonym: Reut_A2129
Alternate gene names: 73541817
Gene position: 2350089-2348206 (Counterclockwise)
Preceding gene: 73541819
Following gene: 73541816
Centisome position: 61.74
GC content: 62.1
Gene sequence:
>1884_bases ATGCCTATACAAGCACGTTGGCCGCTTCAGGCGGCATGGCAGTGCTTCCGTCGAGACACGGTACTGCGGTTTGGGCTGGC GCTGGCGCTCGCTGCGGGCATTCCCGCAACGGCGAATGCGGCGCATGGCTTTGCCTTGCACGGGAATCTCAAGTACCCGG CCGATTTCAAGTATTTCGATTACGTGAATCCGGACGCTCCGGTCGGCGGCACGCTGGTGCTGGCCAACCCGGACCGCCGC ACGAGCTTCGACAAGTTCAATCCGTTCACGCTGAAGGGTACCGCCGCGCCCGGCCTGAACGCCTTGATGTTCGAGTCGCT GCTGATCAGCAGCGCCGACGAAACCGCGAGCGCCTACGGGCTGCTGGCTGACGATGTCACGGTGGCGCCGGACGAGCTTT CAGTCGTCTTCCATATCCGCCCCGAAGCGCGCTTCGCCAACGGCGACCCGGTCCTCGCATCGGACGTGAAATATTCCTAC GACATGCTGATGAGCAAGGCGTCCAGCCCGGGCTACCGCAGCATGTGCATGGACGTGAAGTCGGTCGTGGTCACGGGGGA ACGCAGCGTGCGCTTTGATTTCAAGCAACGCAACCGCGAACTGCCGCTGATCGTCGGCTCGTTGCCGGTGTTCTCGAAGA AATGGACCCAGGCCGTGCCCTTCGAGAAGCTGACGTTCGAAGAACCGGTGACCAGCGGCCCGTACATCATCGATCGCTAT GACGCGGGCCGCGGCATCATCTTCAAGCGTGATCCGAACTACTGGGGCAAGAAGCTGGCCGTGCGGCGCGGCACCTTCAA TTTCGACCGCGTCATCTACCGGCTCTACAAGGACGAAACCGCCAAGCTCGAAGCGTTCAAGGCGGGCGAGTTCGATGCGA TCGTCGAGTACCGTGCCAAGAACTGGGCCAAGAGCTACCAGGGCACGAAGTTCACCAAGGGCGAGCTGATCAAGACGGAG TTCCCGCACCGCAACGGCGCGGGCATGCAGGGTTTTGTCATGAACATGCGCAAGCCCATCTTCAAGGACGTGCGCGTCAG GCAGGCGCTGATCCTCGCGCTGGATTTCGAATGGCTCAACCGCCAGCTTTTCTATGGCGCATACAAGCGCCTCGACAGCT GGTTCTCCAATAGCGAACTGGCGGCCAGCGCCACGTTCGACGGCAAGCCGGGGCCGAGCGAACTGAAATTGCTGGAGCCG ATGCACGCAAAGCTGGCGCCCGAAGTCTTCGGCCCCGACGTCGTGCAGCCGTCCACGAACCCCCCGCGAACGCTGCGCGA CAACCTGCGCGAAGCACGCCGCCTGCTGGCGCAGGCCGGCTGGACCTATACCGATGATGCACTGCGCAACGCCAAGGGCG AACCGATGGTGTTCGAGTTCCTCGATGATGGCGGCGCGATGAGCCGGGTGATTACCACCTATGTCCGAAATCTCGAGAAG CTCGGCATCCAGGTGAACCAGCGCACCACCGACTACGCGCTGTACCAGAAGCGGCTCGAAGATTTCGATTTCGACATGGT GTCGATCCGTTTCCCCGATTCGCAGAGCCCCGGCAACGAACTGCGCGACCGGTTTTCCAGCGAAGCGGCCGACACGCCGG GCTCGGACAACCTGTTCGGGCTGAAGTCGCCGCAGGTGGACCAGCTTGTCGATAACGTGCTGCATGCCAACACGCGTGAA GAACTCGTCACCGCGGGCAGGGCACTGGACCGCGTGCTGATGCATGGGTACTACATCGTGCCAAACTGGTACAGTGCGTC GCATCGGGTCGCGTATCGCAAGGAGCTGGGCTATCCCAAGGACCGGCTGCCTTATTACTACACTGCCGAAGGCTGGATTC TGAGCAACTGGTGGCGCACCGACGTGCAACCGAAGGCTCGCTGA
Upstream 100 bases:
>100_bases GGATGGCTGGAGCCTACCCGGACGCATGTAAAATTGTCTCACAACTTGGCCCGGCTGCAGAACGCCGGACCTCAGCGTCA TATTGGAGGAATCCAGCGGG
Downstream 100 bases:
>100_bases GCAAAAGGAACGGCCGATGCTTGCCTATCTGTTCAAGCGCATTTTGCTGATGATCCCGACGCTGATCGGCGTCATCACGC TGACCTTTGTCGTCATCCAG
Product: extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MPIQARWPLQAAWQCFRRDTVLRFGLALALAAGIPATANAAHGFALHGNLKYPADFKYFDYVNPDAPVGGTLVLANPDRR TSFDKFNPFTLKGTAAPGLNALMFESLLISSADETASAYGLLADDVTVAPDELSVVFHIRPEARFANGDPVLASDVKYSY DMLMSKASSPGYRSMCMDVKSVVVTGERSVRFDFKQRNRELPLIVGSLPVFSKKWTQAVPFEKLTFEEPVTSGPYIIDRY DAGRGIIFKRDPNYWGKKLAVRRGTFNFDRVIYRLYKDETAKLEAFKAGEFDAIVEYRAKNWAKSYQGTKFTKGELIKTE FPHRNGAGMQGFVMNMRKPIFKDVRVRQALILALDFEWLNRQLFYGAYKRLDSWFSNSELAASATFDGKPGPSELKLLEP MHAKLAPEVFGPDVVQPSTNPPRTLRDNLREARRLLAQAGWTYTDDALRNAKGEPMVFEFLDDGGAMSRVITTYVRNLEK LGIQVNQRTTDYALYQKRLEDFDFDMVSIRFPDSQSPGNELRDRFSSEAADTPGSDNLFGLKSPQVDQLVDNVLHANTRE ELVTAGRALDRVLMHGYYIVPNWYSASHRVAYRKELGYPKDRLPYYYTAEGWILSNWWRTDVQPKAR
Sequences:
>Translated_627_residues MPIQARWPLQAAWQCFRRDTVLRFGLALALAAGIPATANAAHGFALHGNLKYPADFKYFDYVNPDAPVGGTLVLANPDRR TSFDKFNPFTLKGTAAPGLNALMFESLLISSADETASAYGLLADDVTVAPDELSVVFHIRPEARFANGDPVLASDVKYSY DMLMSKASSPGYRSMCMDVKSVVVTGERSVRFDFKQRNRELPLIVGSLPVFSKKWTQAVPFEKLTFEEPVTSGPYIIDRY DAGRGIIFKRDPNYWGKKLAVRRGTFNFDRVIYRLYKDETAKLEAFKAGEFDAIVEYRAKNWAKSYQGTKFTKGELIKTE FPHRNGAGMQGFVMNMRKPIFKDVRVRQALILALDFEWLNRQLFYGAYKRLDSWFSNSELAASATFDGKPGPSELKLLEP MHAKLAPEVFGPDVVQPSTNPPRTLRDNLREARRLLAQAGWTYTDDALRNAKGEPMVFEFLDDGGAMSRVITTYVRNLEK LGIQVNQRTTDYALYQKRLEDFDFDMVSIRFPDSQSPGNELRDRFSSEAADTPGSDNLFGLKSPQVDQLVDNVLHANTRE ELVTAGRALDRVLMHGYYIVPNWYSASHRVAYRKELGYPKDRLPYYYTAEGWILSNWWRTDVQPKAR >Mature_626_residues PIQARWPLQAAWQCFRRDTVLRFGLALALAAGIPATANAAHGFALHGNLKYPADFKYFDYVNPDAPVGGTLVLANPDRRT SFDKFNPFTLKGTAAPGLNALMFESLLISSADETASAYGLLADDVTVAPDELSVVFHIRPEARFANGDPVLASDVKYSYD MLMSKASSPGYRSMCMDVKSVVVTGERSVRFDFKQRNRELPLIVGSLPVFSKKWTQAVPFEKLTFEEPVTSGPYIIDRYD AGRGIIFKRDPNYWGKKLAVRRGTFNFDRVIYRLYKDETAKLEAFKAGEFDAIVEYRAKNWAKSYQGTKFTKGELIKTEF PHRNGAGMQGFVMNMRKPIFKDVRVRQALILALDFEWLNRQLFYGAYKRLDSWFSNSELAASATFDGKPGPSELKLLEPM HAKLAPEVFGPDVVQPSTNPPRTLRDNLREARRLLAQAGWTYTDDALRNAKGEPMVFEFLDDGGAMSRVITTYVRNLEKL GIQVNQRTTDYALYQKRLEDFDFDMVSIRFPDSQSPGNELRDRFSSEAADTPGSDNLFGLKSPQVDQLVDNVLHANTREE LVTAGRALDRVLMHGYYIVPNWYSASHRVAYRKELGYPKDRLPYYYTAEGWILSNWWRTDVQPKAR
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=584, Percent_Identity=34.7602739726027, Blast_Score=333, Evalue=2e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 71112; Mature: 70980
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQARWPLQAAWQCFRRDTVLRFGLALALAAGIPATANAAHGFALHGNLKYPADFKYFD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEC YVNPDAPVGGTLVLANPDRRTSFDKFNPFTLKGTAAPGLNALMFESLLISSADETASAYG CCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHE LLADDVTVAPDELSVVFHIRPEARFANGDPVLASDVKYSYDMLMSKASSPGYRSMCMDVK EEECCCEECCCCEEEEEEECCCCEECCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHH SVVVTGERSVRFDFKQRNRELPLIVGSLPVFSKKWTQAVPFEKLTFEEPVTSGPYIIDRY HHEEECCCEEEEEHHHCCCCCCEEEECCCCHHHHHHHCCCCHHCCCCCCCCCCCEEEEEE DAGRGIIFKRDPNYWGKKLAVRRGTFNFDRVIYRLYKDETAKLEAFKAGEFDAIVEYRAK CCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHH NWAKSYQGTKFTKGELIKTEFPHRNGAGMQGFVMNMRKPIFKDVRVRQALILALDFEWLN HHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH RQLFYGAYKRLDSWFSNSELAASATFDGKPGPSELKLLEPMHAKLAPEVFGPDVVQPSTN HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCHHHHHHCCHHCCCCCCCCCCC PPRTLRDNLREARRLLAQAGWTYTDDALRNAKGEPMVFEFLDDGGAMSRVITTYVRNLEK CCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LGIQVNQRTTDYALYQKRLEDFDFDMVSIRFPDSQSPGNELRDRFSSEAADTPGSDNLFG HCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEE LKSPQVDQLVDNVLHANTREELVTAGRALDRVLMHGYYIVPNWYSASHRVAYRKELGYPK CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCH DRLPYYYTAEGWILSNWWRTDVQPKAR HHCCEEEECCCEEEECCCCCCCCCCCC >Mature Secondary Structure PIQARWPLQAAWQCFRRDTVLRFGLALALAAGIPATANAAHGFALHGNLKYPADFKYFD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEC YVNPDAPVGGTLVLANPDRRTSFDKFNPFTLKGTAAPGLNALMFESLLISSADETASAYG CCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHE LLADDVTVAPDELSVVFHIRPEARFANGDPVLASDVKYSYDMLMSKASSPGYRSMCMDVK EEECCCEECCCCEEEEEEECCCCEECCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHH SVVVTGERSVRFDFKQRNRELPLIVGSLPVFSKKWTQAVPFEKLTFEEPVTSGPYIIDRY HHEEECCCEEEEEHHHCCCCCCEEEECCCCHHHHHHHCCCCHHCCCCCCCCCCCEEEEEE DAGRGIIFKRDPNYWGKKLAVRRGTFNFDRVIYRLYKDETAKLEAFKAGEFDAIVEYRAK CCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHH NWAKSYQGTKFTKGELIKTEFPHRNGAGMQGFVMNMRKPIFKDVRVRQALILALDFEWLN HHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH RQLFYGAYKRLDSWFSNSELAASATFDGKPGPSELKLLEPMHAKLAPEVFGPDVVQPSTN HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCHHHHHHCCHHCCCCCCCCCCC PPRTLRDNLREARRLLAQAGWTYTDDALRNAKGEPMVFEFLDDGGAMSRVITTYVRNLEK CCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LGIQVNQRTTDYALYQKRLEDFDFDMVSIRFPDSQSPGNELRDRFSSEAADTPGSDNLFG HCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEE LKSPQVDQLVDNVLHANTREELVTAGRALDRVLMHGYYIVPNWYSASHRVAYRKELGYPK CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCH DRLPYYYTAEGWILSNWWRTDVQPKAR HHCCEEEECCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA