| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is gltX
Identifier: 73541811
GI number: 73541811
Start: 2340644
End: 2342050
Strand: Reverse
Name: gltX
Synonym: Reut_A2123
Alternate gene names: 73541811
Gene position: 2342050-2340644 (Counterclockwise)
Preceding gene: 73541813
Following gene: 73541804
Centisome position: 61.53
GC content: 64.25
Gene sequence:
>1407_bases ATGACCCAACGCGTCCGCACCCGTTTCGCGCCGAGCCCGACCGGCTTTATCCACCTCGGCAATATTCGATCCGCGCTTTA TCCGTGGGCGTTCGCCCGCCGGATGAAGGGCGATTTCGTGCTGCGCATCGAAGATACCGATGTCGAGCGTTCCTCGCAGG AAGCCGTCGACGTGATCCTCGAAGGCATGGCGTGGCTCGGCCTGGATATCGACGAAGGCCCGTTCTACCAGATGCAGCGC ATGGACCGCTACCGCGAGGTGCTGGCCCAGATGGTCGACAGCGGCCTGGCCTACCCGTGCTATATGAGCACGGAAGAACT GGACGCGCTGCGCGAAGCCCAGCGCGAGCGCGGCGAAAAGCCGCGCTACAACGGTTTCTGGCGCCCCGAGCCGGGCAAGG TCTTGCCGCAGCCGCCGGCCGGCGTGAAGCCGGTGCTGCGTTTCCGCAATCCGCTTGACGGCAGCGTAGTCTGGGACGAC GCGGTCAAGGGCCGTATCGAGATCTCGAACGAGGAGTTGGACGACCTCGTCATTGCGCGGCCGGACGGCACGCCCACCTA CAACTTCTGCGTGGTGGTCGACGATCTCGACATGAAGATCACGCACGTGATCCGTGGTGACGACCACGTCAACAATACGC CGCGTCAGATCAATATCATCCGCGCGCTTGGCGGCACACAGCCCGTCTACGCGCACTTGCCCACGGTGCTCAACGAGAGC GGCGAGAAGATGAGCAAGCGTCATGGCGCCATGAGCGTGACTGGCTATCGCGATGAAGGCTATCTGCCGGAAGCCGTGGT GAACTACCTGGCCCGCCTGGGCTGGGCGCATGGCGACGCGGAAATCTTCAGCCGCGAGCAGTTTGTGGAGTGGTTCGACC TCGAACACCTGGGCAAGTCGCCGGCGCAGTACAACCCGGAAAAGCTGGCCTGGCTGAACAACCACTACATCAAGGTGGGC GACAATGCGCGCCTGGCCGAGCTGACGCGTCCATTCATCGAGGCGCTCGGCGGCAAGGTGGAGGGTGCGGACCTGGTTGG GGTGATCGCACTCGTCAAGGACCGGGCTAATACGCTCAAGGACGTTGCGCAGACGGCGCTGCTGTTCTACCGCGGCGAGC CACAGGCTGATGCTGCCCTGAAGGCCGAGCACCTGACGCCGGAAATCCAGCCGGCACTGAAGGCGCTGGCGACTCAACTG GGCGCCTTGCCCGAATGGAAGCGCGAAGCCATCAGCGCTACGTTCAAGGCGGTGCTTGCGGAGTTTGGGCTGAAGATGCC CAAGCTGGCCATGCCAGTGCGCCTGCTGGTCGCTGGCCAGTTGCAGACGCCGAGCATCGACGCGGTGCTCGAGCTGTTCG GCCGGGAAGCTGTGCTGCGCCGTATCGGCGCGGGCGTCGAAGCGTAA
Upstream 100 bases:
>100_bases GGCGGGCGTGGGCCAGCGGGTTCGCTTGCTATAATGCAGCACCGACATATTCCAGCCTGCGCGCGTCCGCGCGGGCTTTT TTGTTTGTTCCCCGACCGCC
Downstream 100 bases:
>100_bases AAAGCTGCGAAAAACTCCTGGCAGGGGCTTGCGCTCCGGCCCGGAGTTCGCCATAATCTCGTTCTCCCTGCAGCGCGGTC AGTGATCAAGCGGGCGGTCT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTQRVRTRFAPSPTGFIHLGNIRSALYPWAFARRMKGDFVLRIEDTDVERSSQEAVDVILEGMAWLGLDIDEGPFYQMQR MDRYREVLAQMVDSGLAYPCYMSTEELDALREAQRERGEKPRYNGFWRPEPGKVLPQPPAGVKPVLRFRNPLDGSVVWDD AVKGRIEISNEELDDLVIARPDGTPTYNFCVVVDDLDMKITHVIRGDDHVNNTPRQINIIRALGGTQPVYAHLPTVLNES GEKMSKRHGAMSVTGYRDEGYLPEAVVNYLARLGWAHGDAEIFSREQFVEWFDLEHLGKSPAQYNPEKLAWLNNHYIKVG DNARLAELTRPFIEALGGKVEGADLVGVIALVKDRANTLKDVAQTALLFYRGEPQADAALKAEHLTPEIQPALKALATQL GALPEWKREAISATFKAVLAEFGLKMPKLAMPVRLLVAGQLQTPSIDAVLELFGREAVLRRIGAGVEA
Sequences:
>Translated_468_residues MTQRVRTRFAPSPTGFIHLGNIRSALYPWAFARRMKGDFVLRIEDTDVERSSQEAVDVILEGMAWLGLDIDEGPFYQMQR MDRYREVLAQMVDSGLAYPCYMSTEELDALREAQRERGEKPRYNGFWRPEPGKVLPQPPAGVKPVLRFRNPLDGSVVWDD AVKGRIEISNEELDDLVIARPDGTPTYNFCVVVDDLDMKITHVIRGDDHVNNTPRQINIIRALGGTQPVYAHLPTVLNES GEKMSKRHGAMSVTGYRDEGYLPEAVVNYLARLGWAHGDAEIFSREQFVEWFDLEHLGKSPAQYNPEKLAWLNNHYIKVG DNARLAELTRPFIEALGGKVEGADLVGVIALVKDRANTLKDVAQTALLFYRGEPQADAALKAEHLTPEIQPALKALATQL GALPEWKREAISATFKAVLAEFGLKMPKLAMPVRLLVAGQLQTPSIDAVLELFGREAVLRRIGAGVEA >Mature_467_residues TQRVRTRFAPSPTGFIHLGNIRSALYPWAFARRMKGDFVLRIEDTDVERSSQEAVDVILEGMAWLGLDIDEGPFYQMQRM DRYREVLAQMVDSGLAYPCYMSTEELDALREAQRERGEKPRYNGFWRPEPGKVLPQPPAGVKPVLRFRNPLDGSVVWDDA VKGRIEISNEELDDLVIARPDGTPTYNFCVVVDDLDMKITHVIRGDDHVNNTPRQINIIRALGGTQPVYAHLPTVLNESG EKMSKRHGAMSVTGYRDEGYLPEAVVNYLARLGWAHGDAEIFSREQFVEWFDLEHLGKSPAQYNPEKLAWLNNHYIKVGD NARLAELTRPFIEALGGKVEGADLVGVIALVKDRANTLKDVAQTALLFYRGEPQADAALKAEHLTPEIQPALKALATQLG ALPEWKREAISATFKAVLAEFGLKMPKLAMPVRLLVAGQLQTPSIDAVLELFGREAVLRRIGAGVEA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=496, Percent_Identity=29.8387096774194, Blast_Score=199, Evalue=5e-51, Organism=Escherichia coli, GI1788743, Length=465, Percent_Identity=48.1720430107527, Blast_Score=468, Evalue=1e-133, Organism=Escherichia coli, GI226510925, Length=245, Percent_Identity=34.6938775510204, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI1786895, Length=119, Percent_Identity=27.7310924369748, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71993394, Length=484, Percent_Identity=31.198347107438, Blast_Score=207, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6324540, Length=487, Percent_Identity=28.7474332648871, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321192, Length=221, Percent_Identity=27.6018099547511, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324742, Length=107, Percent_Identity=28.9719626168224, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24665321, Length=486, Percent_Identity=30.8641975308642, Blast_Score=223, Evalue=2e-58,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_CUPPJ (Q46ZE6)
Other databases:
- EMBL: CP000090 - RefSeq: YP_296331.1 - ProteinModelPortal: Q46ZE6 - SMR: Q46ZE6 - GeneID: 3610852 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A2123 - NMPDR: fig|264198.3.peg.2935 - HOGENOM: HBG628189 - OMA: MAHIPLI - ProtClustDB: PRK01406 - BioCyc: REUT264198:REUT_A2123-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 52323; Mature: 52191
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 246-246
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRVRTRFAPSPTGFIHLGNIRSALYPWAFARRMKGDFVLRIEDTDVERSSQEAVDVIL CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH EGMAWLGLDIDEGPFYQMQRMDRYREVLAQMVDSGLAYPCYMSTEELDALREAQRERGEK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCC PRYNGFWRPEPGKVLPQPPAGVKPVLRFRNPLDGSVVWDDAVKGRIEISNEELDDLVIAR CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCEEEEC PDGTPTYNFCVVVDDLDMKITHVIRGDDHVNNTPRQINIIRALGGTQPVYAHLPTVLNES CCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCC GEKMSKRHGAMSVTGYRDEGYLPEAVVNYLARLGWAHGDAEIFSREQFVEWFDLEHLGKS HHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC PAQYNPEKLAWLNNHYIKVGDNARLAELTRPFIEALGGKVEGADLVGVIALVKDRANTLK CCCCCCHHEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH DVAQTALLFYRGEPQADAALKAEHLTPEIQPALKALATQLGALPEWKREAISATFKAVLA HHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EFGLKMPKLAMPVRLLVAGQLQTPSIDAVLELFGREAVLRRIGAGVEA HHCCCCCCHHHCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TQRVRTRFAPSPTGFIHLGNIRSALYPWAFARRMKGDFVLRIEDTDVERSSQEAVDVIL CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH EGMAWLGLDIDEGPFYQMQRMDRYREVLAQMVDSGLAYPCYMSTEELDALREAQRERGEK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCC PRYNGFWRPEPGKVLPQPPAGVKPVLRFRNPLDGSVVWDDAVKGRIEISNEELDDLVIAR CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCEEEEC PDGTPTYNFCVVVDDLDMKITHVIRGDDHVNNTPRQINIIRALGGTQPVYAHLPTVLNES CCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCC GEKMSKRHGAMSVTGYRDEGYLPEAVVNYLARLGWAHGDAEIFSREQFVEWFDLEHLGKS HHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC PAQYNPEKLAWLNNHYIKVGDNARLAELTRPFIEALGGKVEGADLVGVIALVKDRANTLK CCCCCCHHEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH DVAQTALLFYRGEPQADAALKAEHLTPEIQPALKALATQLGALPEWKREAISATFKAVLA HHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EFGLKMPKLAMPVRLLVAGQLQTPSIDAVLELFGREAVLRRIGAGVEA HHCCCCCCHHHCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA