Click here to switch to the map view.

The map label for this gene is omp32 [H]

Identifier: 73541788

GI number: 73541788

Start: 2308075

End: 2309178

Strand: Reverse

Name: omp32 [H]

Synonym: Reut_A2100

Alternate gene names: 73541788

Gene position: 2309178-2308075 (Counterclockwise)

Preceding gene: 73541791

Following gene: 73541786

Centisome position: 60.66

GC content: 64.95

Gene sequence:

>1104_bases
ATGGCTGTTACCACAAACCACAACAAGCAAAGCAAGGAGAGAAGAATGAAACGTACGGCACTGGCTCTGGCCTGCATCGG
TCTGACGGGCACCGGTTCGGTCTGCGCCCAGTCGAGCGTGACCATGTATGGCCTGGTCGACGCGGGGGTCGAGTATGTCA
ACCATGCCGGGCCCAATGGCTCAGTGGTCAAGCTGACCTCGGGCGGGCGCAATACCTCGCGCTGGGGCATGCGCGGCGTC
GAGGATCTCGGCGGCGGCCTGAAGGCGGTGTTCAACCTGGAAAGCGGCATTGCCATCGACACCGGCAATCTCGATACGAG
CGGCACGCTGTTCGATCGCCGCGCCACGGTCGGCCTCAGCAGCAACTATGGCCAGGTGGTCATGGGCCGCACGTTCACCA
CGACGTACGACTTCATGCTGCCGTTCGACCCGATGGGCTACGCGCCGAACTATTCGTGGGCGACGTCGTCCACGGCGACC
GGCGGTCGCAAGGACGGCCTGTTCTCGCGTGCATCGAATGCCGTCCGCTATGACGGTAAGTTTGGCGGCCTGAAGCTGGG
CGCGACCGCGGCCATGGGGGAAGTGGCGGGCGACTTCAAGACCGCGTCCAAGTATGCCCTCGGCGTCGGCTACAACGCGG
GCAAGTTCGCCGCCGCGGCGACCTGGGATCGCCAGAACGGGGCTGGCAGCAGCACCACGCCGGCCGATACCACGGACTAT
ATCCAGGGCATCCACGCGGGCGCGAGCTATGACTTCGGCAGCCTGTCGCTGTTTGCCGGCTACCGCAACTACAAGCGCAC
GCTGACCACCGGCGCGGCGTCGGAGCGCAGCGATATGTACTGGGGCGGCGCAAGCTATGACTTCACGCCGGCGTTCACGC
TGTACGGCGCGGTCTACAAGCAGAACATCAAGGGCGGTAACGACGCCGATCCGATCCTGTTCTCGCTGCGCGCGCAGTAC
TCGTTCTCGAAGCGCACGCTGGCCTATCTGTCGGCCGGCTATGCCAAGGCCCGCAACGGCCAGAACGTCAGCCTGTCGCG
CGATTTCGTGGGGTACGCCAACAGCCAGACCGGCGTGATGGCCGGCCTGCAGCACCGCTTCTGA

Upstream 100 bases:

>100_bases
CATGCGGTCGTGCCGGTACTGCGGCCGACGCGGGGCGGCCGTCATGCCACCGCGATTCGCCGCCGGCTTTACCGGCGGGC
ACGATCCTCAGGCGAACGCG

Downstream 100 bases:

>100_bases
TCAGAGAGTGTCATGTCGAGTCAGCGACTGTTGGAGTGGCTGACCTGATTGGGAACTGTCTTCCGCTGCCAGTAGGGGTG
TGCGTGAAGGTGGAAGACAG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MAVTTNHNKQSKERRMKRTALALACIGLTGTGSVCAQSSVTMYGLVDAGVEYVNHAGPNGSVVKLTSGGRNTSRWGMRGV
EDLGGGLKAVFNLESGIAIDTGNLDTSGTLFDRRATVGLSSNYGQVVMGRTFTTTYDFMLPFDPMGYAPNYSWATSSTAT
GGRKDGLFSRASNAVRYDGKFGGLKLGATAAMGEVAGDFKTASKYALGVGYNAGKFAAAATWDRQNGAGSSTTPADTTDY
IQGIHAGASYDFGSLSLFAGYRNYKRTLTTGAASERSDMYWGGASYDFTPAFTLYGAVYKQNIKGGNDADPILFSLRAQY
SFSKRTLAYLSAGYAKARNGQNVSLSRDFVGYANSQTGVMAGLQHRF

Sequences:

>Translated_367_residues
MAVTTNHNKQSKERRMKRTALALACIGLTGTGSVCAQSSVTMYGLVDAGVEYVNHAGPNGSVVKLTSGGRNTSRWGMRGV
EDLGGGLKAVFNLESGIAIDTGNLDTSGTLFDRRATVGLSSNYGQVVMGRTFTTTYDFMLPFDPMGYAPNYSWATSSTAT
GGRKDGLFSRASNAVRYDGKFGGLKLGATAAMGEVAGDFKTASKYALGVGYNAGKFAAAATWDRQNGAGSSTTPADTTDY
IQGIHAGASYDFGSLSLFAGYRNYKRTLTTGAASERSDMYWGGASYDFTPAFTLYGAVYKQNIKGGNDADPILFSLRAQY
SFSKRTLAYLSAGYAKARNGQNVSLSRDFVGYANSQTGVMAGLQHRF
>Mature_366_residues
AVTTNHNKQSKERRMKRTALALACIGLTGTGSVCAQSSVTMYGLVDAGVEYVNHAGPNGSVVKLTSGGRNTSRWGMRGVE
DLGGGLKAVFNLESGIAIDTGNLDTSGTLFDRRATVGLSSNYGQVVMGRTFTTTYDFMLPFDPMGYAPNYSWATSSTATG
GRKDGLFSRASNAVRYDGKFGGLKLGATAAMGEVAGDFKTASKYALGVGYNAGKFAAAATWDRQNGAGSSTTPADTTDYI
QGIHAGASYDFGSLSLFAGYRNYKRTLTTGAASERSDMYWGGASYDFTPAFTLYGAVYKQNIKGGNDADPILFSLRAQYS
FSKRTLAYLSAGYAKARNGQNVSLSRDFVGYANSQTGVMAGLQHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38886; Mature: 38754

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTTNHNKQSKERRMKRTALALACIGLTGTGSVCAQSSVTMYGLVDAGVEYVNHAGPNG
CCEECCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCEEEEEEHHHHHHHHHCCCCCC
SVVKLTSGGRNTSRWGMRGVEDLGGGLKAVFNLESGIAIDTGNLDTSGTLFDRRATVGLS
CEEEEECCCCCCCCCCCCCHHHHCCCEEEEEECCCCCEEECCCCCCCCCEEECEEEEEEC
SNYGQVVMGRTFTTTYDFMLPFDPMGYAPNYSWATSSTATGGRKDGLFSRASNAVRYDGK
CCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCC
FGGLKLGATAAMGEVAGDFKTASKYALGVGYNAGKFAAAATWDRQNGAGSSTTPADTTDY
CCCEEECCHHHHHHHHCCHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHH
IQGIHAGASYDFGSLSLFAGYRNYKRTLTTGAASERSDMYWGGASYDFTPAFTLYGAVYK
HHHHHCCCCCCCCCEEEEHHHHHHHHEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHH
QNIKGGNDADPILFSLRAQYSFSKRTLAYLSAGYAKARNGQNVSLSRDFVGYANSQTGVM
HCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCHHHCCCCCCEEECHHHCCCCCCCCHHH
AGLQHRF
HHHHCCC
>Mature Secondary Structure 
AVTTNHNKQSKERRMKRTALALACIGLTGTGSVCAQSSVTMYGLVDAGVEYVNHAGPNG
CEECCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCEEEEEEHHHHHHHHHCCCCCC
SVVKLTSGGRNTSRWGMRGVEDLGGGLKAVFNLESGIAIDTGNLDTSGTLFDRRATVGLS
CEEEEECCCCCCCCCCCCCHHHHCCCEEEEEECCCCCEEECCCCCCCCCEEECEEEEEEC
SNYGQVVMGRTFTTTYDFMLPFDPMGYAPNYSWATSSTATGGRKDGLFSRASNAVRYDGK
CCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCC
FGGLKLGATAAMGEVAGDFKTASKYALGVGYNAGKFAAAATWDRQNGAGSSTTPADTTDY
CCCEEECCHHHHHHHHCCHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHH
IQGIHAGASYDFGSLSLFAGYRNYKRTLTTGAASERSDMYWGGASYDFTPAFTLYGAVYK
HHHHHCCCCCCCCCEEEEHHHHHHHHEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHH
QNIKGGNDADPILFSLRAQYSFSKRTLAYLSAGYAKARNGQNVSLSRDFVGYANSQTGVM
HCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCHHHCCCCCCEEECHHHCCCCCCCCHHH
AGLQHRF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]