Click here to switch to the map view.

The map label for this gene is pqqD [H]

Identifier: 73541470

GI number: 73541470

Start: 1944371

End: 1944643

Strand: Direct

Name: pqqD [H]

Synonym: Reut_A1781

Alternate gene names: 73541470

Gene position: 1944371-1944643 (Clockwise)

Preceding gene: 73541469

Following gene: 73541471

Centisome position: 51.08

GC content: 64.1

Gene sequence:

>273_bases
ATGACGACCGATCCGCCAGACCTCGCCCGTCCGGTCCTGCACCGGACTTTCCGCCTGCAGTGGGAAGAGGCCCAGCAGAG
CTGGGTGCTGCTCTACCCCGAAGGCATGGTGACCCTCAACGACAGCGCCGCCGCCATCCTGCAGCGCTGCGACGGTAGTC
ATACGCTGGACATGATGATTGACGACCTGCAGGCCGCATTCAGCGTGCAGGGCATCGCCCCGGAGGTACACGCCTTTGTC
AAACATGCGACCGAACGCGGCTGGCTTGTCTGA

Upstream 100 bases:

>100_bases
ACTTCCGTACACCGGAGCAACAGCAACGCGCGCTCGATATCCTGCAATTCAAGCTCGACGTGCTGTGGTCGATGCTCGAT
GCCATCCAGCTAGCCAACCC

Downstream 100 bases:

>100_bases
GCCCCGTGCCGCCGAACGGCCAGGCCCGCCGCTGTGGCTGCTGGCCGAGCTGACCTACCGCTGCCCGCTGCACTGCGCGT
TCTGCTCCAACCCGGTGGAC

Product: coenzyme PQQ synthesis D

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MTTDPPDLARPVLHRTFRLQWEEAQQSWVLLYPEGMVTLNDSAAAILQRCDGSHTLDMMIDDLQAAFSVQGIAPEVHAFV
KHATERGWLV

Sequences:

>Translated_90_residues
MTTDPPDLARPVLHRTFRLQWEEAQQSWVLLYPEGMVTLNDSAAAILQRCDGSHTLDMMIDDLQAAFSVQGIAPEVHAFV
KHATERGWLV
>Mature_89_residues
TTDPPDLARPVLHRTFRLQWEEAQQSWVLLYPEGMVTLNDSAAAILQRCDGSHTLDMMIDDLQAAFSVQGIAPEVHAFVK
HATERGWLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 10146; Mature: 10014

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDPPDLARPVLHRTFRLQWEEAQQSWVLLYPEGMVTLNDSAAAILQRCDGSHTLDMMI
CCCCCHHHHHHHHHHHHHCCCHHCCCCEEEECCCCEEEECCHHHHHHHHCCCCCCHHHHH
DDLQAAFSVQGIAPEVHAFVKHATERGWLV
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTDPPDLARPVLHRTFRLQWEEAQQSWVLLYPEGMVTLNDSAAAILQRCDGSHTLDMMI
CCCCHHHHHHHHHHHHHCCCHHCCCCEEEECCCCEEEECCHHHHHHHHCCCCCCHHHHH
DDLQAAFSVQGIAPEVHAFVKHATERGWLV
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA