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The map label for this gene is ycdI [C]

Identifier: 73541276

GI number: 73541276

Start: 1709570

End: 1710160

Strand: Direct

Name: ycdI [C]

Synonym: Reut_A1586

Alternate gene names: 73541276

Gene position: 1709570-1710160 (Clockwise)

Preceding gene: 73541275

Following gene: 73541277

Centisome position: 44.91

GC content: 62.94

Gene sequence:

>591_bases
ATGCAAACCAATGAACTGCTTGACAAGATCTTCCGCGGTGCACGCAGCCAGAATGGCTGGCTGCCCACGCCGGTGCCTGA
CAGCAAGCTGCGGGAACTGTATGACCTGATGAAATTTGGCCCGACCTCGGTCAACTGCTCGCCAGCCCGGCTGGTGTTCG
TGCGCACGGAGGAGGGCAGGGAAAAGCTGCGTCCGGCACTGGCCCCCGGCAACGTCGAAAAGACCATGGCGGCGCCGGTC
GTCGCGATCGTCGGCTACGACACGCGCTTCTACGAGCAGCTGCCGGATCTGTTCCCGCACAACCCCGCAGTCAAGGCATG
GTTCGAGGGCGACGAGAAGGTGGATTTCGCCAACACCACCGCGTTTCGAAACGGCACGCTGCAAGGCGGCTATCTTATCG
CCGCTGCGCGCGCGCTGGGTCTCGATTGCGGCCCCATGTCCGGCTTCAACAACCAGGCCATCGATCAGGCCTTCTTCGCC
GGCACCAGCATCCGCTCGAATTTCATCTGCGGCCTTGGTCACGGCGACCCGGAAAAAGTGTTCGCCCGCAGTCCACGCCT
GTCGTTCGAGCAGGCCTGCCAACTTGCCTAG

Upstream 100 bases:

>100_bases
AGGAAAAGCTTGCCCTGAGCGGCACGATGACTGTGTGACCGCCTCAACCTCCGGCCAGCGTCGTCTGGCCGGAACACCCG
AAACATGCAAGGAGTGAATG

Downstream 100 bases:

>100_bases
CGGCCGGGAGTCCAGTGATGCAAGAGTATGACCAGCATAACCTGACCAAGGCCGTCATTGCGCGCCTGGCCGATACGCCC
AATGCGCGCACGAAGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MQTNELLDKIFRGARSQNGWLPTPVPDSKLRELYDLMKFGPTSVNCSPARLVFVRTEEGREKLRPALAPGNVEKTMAAPV
VAIVGYDTRFYEQLPDLFPHNPAVKAWFEGDEKVDFANTTAFRNGTLQGGYLIAAARALGLDCGPMSGFNNQAIDQAFFA
GTSIRSNFICGLGHGDPEKVFARSPRLSFEQACQLA

Sequences:

>Translated_196_residues
MQTNELLDKIFRGARSQNGWLPTPVPDSKLRELYDLMKFGPTSVNCSPARLVFVRTEEGREKLRPALAPGNVEKTMAAPV
VAIVGYDTRFYEQLPDLFPHNPAVKAWFEGDEKVDFANTTAFRNGTLQGGYLIAAARALGLDCGPMSGFNNQAIDQAFFA
GTSIRSNFICGLGHGDPEKVFARSPRLSFEQACQLA
>Mature_196_residues
MQTNELLDKIFRGARSQNGWLPTPVPDSKLRELYDLMKFGPTSVNCSPARLVFVRTEEGREKLRPALAPGNVEKTMAAPV
VAIVGYDTRFYEQLPDLFPHNPAVKAWFEGDEKVDFANTTAFRNGTLQGGYLIAAARALGLDCGPMSGFNNQAIDQAFFA
GTSIRSNFICGLGHGDPEKVFARSPRLSFEQACQLA

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily

Homologues:

Organism=Escherichia coli, GI1787243, Length=189, Percent_Identity=57.6719576719577, Blast_Score=237, Evalue=4e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1586_CUPPJ (Q471I1)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_295796.1
- ProteinModelPortal:   Q471I1
- GeneID:   3610762
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A1586
- NMPDR:   fig|264198.3.peg.1756
- HOGENOM:   HBG322534
- OMA:   GPTSGNC
- ProtClustDB:   PRK05365
- BioCyc:   REUT264198:REUT_A1586-MONOMER
- HAMAP:   MF_01204
- InterPro:   IPR000415

Pfam domain/function: PF00881 Nitroreductase; SSF55469 Nitroreductase

EC number: 1.-.-.- [C]

Molecular weight: Translated: 21532; Mature: 21532

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNELLDKIFRGARSQNGWLPTPVPDSKLRELYDLMKFGPTSVNCSPARLVFVRTEEGR
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCH
EKLRPALAPGNVEKTMAAPVVAIVGYDTRFYEQLPDLFPHNPAVKAWFEGDEKVDFANTT
HHHCCCCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCH
AFRNGTLQGGYLIAAARALGLDCGPMSGFNNQAIDQAFFAGTSIRSNFICGLGHGDPEKV
HCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHH
FARSPRLSFEQACQLA
HHCCCCCCHHHHHCCC
>Mature Secondary Structure
MQTNELLDKIFRGARSQNGWLPTPVPDSKLRELYDLMKFGPTSVNCSPARLVFVRTEEGR
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCH
EKLRPALAPGNVEKTMAAPVVAIVGYDTRFYEQLPDLFPHNPAVKAWFEGDEKVDFANTT
HHHCCCCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCH
AFRNGTLQGGYLIAAARALGLDCGPMSGFNNQAIDQAFFAGTSIRSNFICGLGHGDPEKV
HCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHH
FARSPRLSFEQACQLA
HHCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA