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The map label for this gene is rbn [C]

Identifier: 73540945

GI number: 73540945

Start: 1334574

End: 1335908

Strand: Direct

Name: rbn [C]

Synonym: Reut_A1250

Alternate gene names: 73540945

Gene position: 1334574-1335908 (Clockwise)

Preceding gene: 73540941

Following gene: 73540949

Centisome position: 35.06

GC content: 65.09

Gene sequence:

>1335_bases
ATGTTAGGAACCCGCGTTGCCCGCCTGCGCAGGGAATGGAGTCTGCAGAAGCTGCGCGCGCTCTCGCGCTACGCGCTGCG
CCGCGCGGGCGAAGGCCGCCTGCCCCAGGTTGCCGCCAGCCTCACCTTCACCACCTTCCTGTCGGTCGTGCCGGTGCTGA
CCGTGGCCTTCGCCTTGCTGGCCGCCTTCCCGGTGTTCCGCGAATTCCGCTCGGACATCGAGACCTTCCTGTTCCAGAAC
CTGATTCCCGGCAACGTCAGCGAATCGATCTCGCGCTATCTCGGCCAGTTTTCCAAGAGTGCGCGCGGCCTGACGGCCAT
GGGCCTTGGCGGCCTGATGCTGACATCGGTGCTGACTATGCTGACGGTCGAGGACGCGCTCAACGGGATCTGGCGTGTCA
AGCAGCGCCGGCCATTTGCGCAGCGCGTGCTGATGTTCTGGGCTGTGCTGACATTCGGCCCGGTGCTGATCGGCGCAAGC
CTGTCGGTCAGTTCGTACCTGATCTCGGTGTCTGCCGGCTATGTCGGCAATATGCCGATCGGATTGGGGCTGCTGGTCAG
CGCGACGCCTATCGTGCTGTCGGCGCTTGCGTTTGCGTTCCTCTATACCGCGGTCCCCAACGCTTATGTCGAGTGGCGCG
ACGCCATCGCGGCCGGGCTTGTCGCAGCCATCGCATTCGAATTCGCCAAGCGTGGGTTTGGCTATTTCATCACGCATATC
CCGACGTACACGGCGGTCTATGGCACGTTTGCGGCGCTGCCGATTTTCCTGTTGTGGATCTACCTGAGCTGGCTGGTGAC
GCTGCTCGGCGCCACCATCGCCGCCAATCTTCCGGTCGTGCGGCAAGGTCACTGGCGCCGGCGTACCTTCGCCGGCAGTG
AGTTCTTCGATGCGCTCGGCGTGCTGCTGCTGCTATACAAGGCGCGCGACGAAGTACCGCGCAGCGTGGGGGAAATGGAC
CTGAGCCGCAAGCTGCGCGTGGAGGCCGATTACCTCGGCGTGCTGCTCGGCAAGCTCAAGGCCATGCATCTGATCGGCAA
GCTGCAGCAGGAACGCGGGCAGGCGCACTGGGCGCTGCTGTGCGATCCGTCGCAGGTGCCGCTGCGGACCTTGTATGACC
GGCTGGTGCTGAACTTGCCGCGCTTGCCGCGCACGGCGGTGGCGCAGCAGCTGCAGGGCGCCGAGGTGCTCAAGTCGATC
CTGGTCAATCCGCAGCTGGATCAGCCGCTGGACGTGGTGTTCAGGCAGCAGGTTGCCACGGATCCGCTGGCGTCCGGGGC
AAACGAGACACTGCGACCAGCGCTGGAGATGGTCCCGCCGGGCAGGCGGGGATAA

Upstream 100 bases:

>100_bases
CGGCGGAGGAGGCGGAACAATCCGCGTATTATAGTTGTGCCCCCGCCACGTCAGCGGGGTCGCCCCCTCTCCACATCAAC
ACACAGGAGCCTGCTGCCGC

Downstream 100 bases:

>100_bases
AAGGGCGGGGGGTGTTCAGAACGGAATCCGCCCGCGCAGGATATCCGCATACATTACCCAGTCCCCCATCAGGCTGTAGA
GCGGGTGGCGGAACGTAGCG

Product: tRNA-processing RNAse BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MLGTRVARLRREWSLQKLRALSRYALRRAGEGRLPQVAASLTFTTFLSVVPVLTVAFALLAAFPVFREFRSDIETFLFQN
LIPGNVSESISRYLGQFSKSARGLTAMGLGGLMLTSVLTMLTVEDALNGIWRVKQRRPFAQRVLMFWAVLTFGPVLIGAS
LSVSSYLISVSAGYVGNMPIGLGLLVSATPIVLSALAFAFLYTAVPNAYVEWRDAIAAGLVAAIAFEFAKRGFGYFITHI
PTYTAVYGTFAALPIFLLWIYLSWLVTLLGATIAANLPVVRQGHWRRRTFAGSEFFDALGVLLLLYKARDEVPRSVGEMD
LSRKLRVEADYLGVLLGKLKAMHLIGKLQQERGQAHWALLCDPSQVPLRTLYDRLVLNLPRLPRTAVAQQLQGAEVLKSI
LVNPQLDQPLDVVFRQQVATDPLASGANETLRPALEMVPPGRRG

Sequences:

>Translated_444_residues
MLGTRVARLRREWSLQKLRALSRYALRRAGEGRLPQVAASLTFTTFLSVVPVLTVAFALLAAFPVFREFRSDIETFLFQN
LIPGNVSESISRYLGQFSKSARGLTAMGLGGLMLTSVLTMLTVEDALNGIWRVKQRRPFAQRVLMFWAVLTFGPVLIGAS
LSVSSYLISVSAGYVGNMPIGLGLLVSATPIVLSALAFAFLYTAVPNAYVEWRDAIAAGLVAAIAFEFAKRGFGYFITHI
PTYTAVYGTFAALPIFLLWIYLSWLVTLLGATIAANLPVVRQGHWRRRTFAGSEFFDALGVLLLLYKARDEVPRSVGEMD
LSRKLRVEADYLGVLLGKLKAMHLIGKLQQERGQAHWALLCDPSQVPLRTLYDRLVLNLPRLPRTAVAQQLQGAEVLKSI
LVNPQLDQPLDVVFRQQVATDPLASGANETLRPALEMVPPGRRG
>Mature_444_residues
MLGTRVARLRREWSLQKLRALSRYALRRAGEGRLPQVAASLTFTTFLSVVPVLTVAFALLAAFPVFREFRSDIETFLFQN
LIPGNVSESISRYLGQFSKSARGLTAMGLGGLMLTSVLTMLTVEDALNGIWRVKQRRPFAQRVLMFWAVLTFGPVLIGAS
LSVSSYLISVSAGYVGNMPIGLGLLVSATPIVLSALAFAFLYTAVPNAYVEWRDAIAAGLVAAIAFEFAKRGFGYFITHI
PTYTAVYGTFAALPIFLLWIYLSWLVTLLGATIAANLPVVRQGHWRRRTFAGSEFFDALGVLLLLYKARDEVPRSVGEMD
LSRKLRVEADYLGVLLGKLKAMHLIGKLQQERGQAHWALLCDPSQVPLRTLYDRLVLNLPRLPRTAVAQQLQGAEVLKSI
LVNPQLDQPLDVVFRQQVATDPLASGANETLRPALEMVPPGRRG

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=256, Percent_Identity=38.28125, Blast_Score=193, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 48963; Mature: 48963

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure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CHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]