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The map label for this gene is omp32 [H]

Identifier: 73540940

GI number: 73540940

Start: 1330052

End: 1331080

Strand: Direct

Name: omp32 [H]

Synonym: Reut_A1245

Alternate gene names: 73540940

Gene position: 1330052-1331080 (Clockwise)

Preceding gene: 73540939

Following gene: 73540941

Centisome position: 34.94

GC content: 62.97

Gene sequence:

>1029_bases
ATGAAGTCATTCAGTTTTATCGGGCGAGCGTGCCTGGGCGGCGCGCTGCTGGCAGCGTCGGCCGGCGCGGACGCTGCCAT
GACGCTCTACGGCCGTATCGATACCGATATCGAATATCAGCGCGGTCCGCGCGGCAATGCGGCGCAAATGGTGGACAACG
CATCGCGCTGGGGCATGCGCGGCAACGAAGACCTTGGCGGTTCGCTGCGTGCGGATTTCGGCCTGGAGCAGGGCTTCCAG
GCTGACAATGGCACTGCCACCAATCCGCAGTTCCGCAATGCCTTTGTTGGCCTGAGCGGCGTGTTTGGCGCGTTTGCGCT
GGGGCGGCTCGATTCCGCGACGTCGGTTGGTTCGCCCATTTATTCGCAGATTACGCAGAACGTCGATTTCGTGATCCACG
ATGCCGGCGCCACCGCCATCGGCACCAAGGTGCTTAATGCGCGCAACCGCGTATCGAACGCGCTCGGCTACGCGACGCCA
GATTTCGGGGGGTTCTCGCTGCGTGCCCGTATCAACTTGGCCGGGCCGGATCCCGCTACGCCCAATGCCAGTTCCCCGGT
GAAGGAAGAGGACGATTTTCGCCAGTACGACACCGGGCTGAACTATGCCTCGGGCAACTTCTCCGCGGGCCTCGGTTATT
CGCGCGATGCCAAGACCGGCGGGCTCGTCGCCAATGATTTTCGCGACAAGATGCAGGCAACGGCCGCCTATGACTTCAAG
TTCGTCAACGTGTACGGCGTGTACGGGCGCGACCGCTATGTCGGCACGGCCAGTTCGCGCACCGACGTGCGCTACTGGCT
CGCCGGCTTCACGGTTCCCTACGGCGCGCACAGCCTGACCGTGAACTACATGGAGCGCGACGTGCAGAACAGCACGAGCG
GCAGGCTGCGCAAGGCGCAGGCCGGCTATGGCTATCGCCTCAGCAAGCGCACCATGCCTTACGTCTTCTTCGACTACGAA
GACGGCAACAGCCGCAAGCCCGGCGATACCGTAGTTACCTACGGCATCGGCATCCAGCACAAGTTCTGA

Upstream 100 bases:

>100_bases
TGGCATCCGTTCCGGTCAACGGCGCGGAGGGCGGCGCTCGCGCTCATGAAGCGTGGCGCATGGCGGCGGGGTTGTTTCGC
AAAGGGAGAAGGAGAACAGC

Downstream 100 bases:

>100_bases
CCGGCGAAGCGCGTCGGCTGCACTGTCAATTCGTACCTGTCTGTCCGTTCCATGCCCCATCCCTACACCCTGATCGAACC
TGTCGTCGCTGCCTTGCCGC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKSFSFIGRACLGGALLAASAGADAAMTLYGRIDTDIEYQRGPRGNAAQMVDNASRWGMRGNEDLGGSLRADFGLEQGFQ
ADNGTATNPQFRNAFVGLSGVFGAFALGRLDSATSVGSPIYSQITQNVDFVIHDAGATAIGTKVLNARNRVSNALGYATP
DFGGFSLRARINLAGPDPATPNASSPVKEEDDFRQYDTGLNYASGNFSAGLGYSRDAKTGGLVANDFRDKMQATAAYDFK
FVNVYGVYGRDRYVGTASSRTDVRYWLAGFTVPYGAHSLTVNYMERDVQNSTSGRLRKAQAGYGYRLSKRTMPYVFFDYE
DGNSRKPGDTVVTYGIGIQHKF

Sequences:

>Translated_342_residues
MKSFSFIGRACLGGALLAASAGADAAMTLYGRIDTDIEYQRGPRGNAAQMVDNASRWGMRGNEDLGGSLRADFGLEQGFQ
ADNGTATNPQFRNAFVGLSGVFGAFALGRLDSATSVGSPIYSQITQNVDFVIHDAGATAIGTKVLNARNRVSNALGYATP
DFGGFSLRARINLAGPDPATPNASSPVKEEDDFRQYDTGLNYASGNFSAGLGYSRDAKTGGLVANDFRDKMQATAAYDFK
FVNVYGVYGRDRYVGTASSRTDVRYWLAGFTVPYGAHSLTVNYMERDVQNSTSGRLRKAQAGYGYRLSKRTMPYVFFDYE
DGNSRKPGDTVVTYGIGIQHKF
>Mature_342_residues
MKSFSFIGRACLGGALLAASAGADAAMTLYGRIDTDIEYQRGPRGNAAQMVDNASRWGMRGNEDLGGSLRADFGLEQGFQ
ADNGTATNPQFRNAFVGLSGVFGAFALGRLDSATSVGSPIYSQITQNVDFVIHDAGATAIGTKVLNARNRVSNALGYATP
DFGGFSLRARINLAGPDPATPNASSPVKEEDDFRQYDTGLNYASGNFSAGLGYSRDAKTGGLVANDFRDKMQATAAYDFK
FVNVYGVYGRDRYVGTASSRTDVRYWLAGFTVPYGAHSLTVNYMERDVQNSTSGRLRKAQAGYGYRLSKRTMPYVFFDYE
DGNSRKPGDTVVTYGIGIQHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 36864; Mature: 36864

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFSFIGRACLGGALLAASAGADAAMTLYGRIDTDIEYQRGPRGNAAQMVDNASRWGMR
CCCHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCEEECCCCCCCHHHHHHCHHHCCCC
GNEDLGGSLRADFGLEQGFQADNGTATNPQFRNAFVGLSGVFGAFALGRLDSATSVGSPI
CCCCCCCCCEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHH
YSQITQNVDFVIHDAGATAIGTKVLNARNRVSNALGYATPDFGGFSLRARINLAGPDPAT
HHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCC
PNASSPVKEEDDFRQYDTGLNYASGNFSAGLGYSRDAKTGGLVANDFRDKMQATAAYDFK
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHEEEEE
FVNVYGVYGRDRYVGTASSRTDVRYWLAGFTVPYGAHSLTVNYMERDVQNSTSGRLRKAQ
EEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHCCCCCCCEEECC
AGYGYRLSKRTMPYVFFDYEDGNSRKPGDTVVTYGIGIQHKF
CCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEECEEEECC
>Mature Secondary Structure
MKSFSFIGRACLGGALLAASAGADAAMTLYGRIDTDIEYQRGPRGNAAQMVDNASRWGMR
CCCHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCEEECCCCCCCHHHHHHCHHHCCCC
GNEDLGGSLRADFGLEQGFQADNGTATNPQFRNAFVGLSGVFGAFALGRLDSATSVGSPI
CCCCCCCCCEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHH
YSQITQNVDFVIHDAGATAIGTKVLNARNRVSNALGYATPDFGGFSLRARINLAGPDPAT
HHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCC
PNASSPVKEEDDFRQYDTGLNYASGNFSAGLGYSRDAKTGGLVANDFRDKMQATAAYDFK
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHEEEEE
FVNVYGVYGRDRYVGTASSRTDVRYWLAGFTVPYGAHSLTVNYMERDVQNSTSGRLRKAQ
EEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHCCCCCCCEEECC
AGYGYRLSKRTMPYVFFDYEDGNSRKPGDTVVTYGIGIQHKF
CCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]