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The map label for this gene is xp55 [H]

Identifier: 73540935

GI number: 73540935

Start: 1324327

End: 1325961

Strand: Direct

Name: xp55 [H]

Synonym: Reut_A1240

Alternate gene names: 73540935

Gene position: 1324327-1325961 (Clockwise)

Preceding gene: 73540934

Following gene: 73540936

Centisome position: 34.79

GC content: 68.5

Gene sequence:

>1635_bases
ATGTTTCAGCAAACGAAAACTACGACCCCTGCAGGAGGCCGCCGTCACTGGGCGGCCATGCTCGTTCTGGCGGGCATGCT
CGTGTTGGCCGGCGCGGGTTCGGCGCGCGCGGCCGACTTGCGCATTGGCTACAAGGCGGAAATCAGCGCTGCGGATCCGC
ATGTGCTGGACGCGGCGGGACGGAATCTCTGGGGCCATGTCTACGAGACGCTGGTCGGCCTGGATAACGAACTGCACCCC
GTGGCTCAACTCGCCACCGGCTGGCGACAAGTGGACGCACGCACATGGGAGTTCCAGCTTCGCCCGGGCGTGCGCTTCAG
CAACGGCGAACCGTTTACCGCGGAAGATGCGCGCTATTCGATCGAGCGCGCACGGCATCTGGCTGGCGCGCGCACGTTCC
GCACGTACCTGAAGTCGATTGCCGAAGTGCAGGTCACCGGGCCGCTGACGCTGCGTGTCGTGACGCGCACACCCAACCCG
GTGCTGCCGCAGAACGTGGGGCTCGTGGCGATGCTGCCGCGCTCGCTTGGCGGCGCGGTGAAAGAAGCGGACTTCGCCAC
GGGCCGGGCGGCCATCGGCACGGGTCCATACCGTTTCGTCGCGTGGGAGCATGGCCAGCAGCTCACGTTTGCGCGCAACC
CGACCTACTGGGGTGCGCTGGAGCCTTGGGGCCACGTGGTTTTCCAGTTCATGGCCAAGGAGCCGGCGCGTGCCTCGGCG
CTGCTGTCGGGGCTGGTGGACATGATCGACGCGTCGTCGGCCAGCATTGCCGACGCCTTCACGCGTACCAACGGGCGCAT
CCGCACCGTATCGGCCACGTCGTACATGCTGAATTACCTGCAGCTCGACCAGGCGCGCAAGGTGTCGCCCTACGTGAGCG
ACAACCAAGGCAAGCCGCTGGGCGCCAACCCGCTGCGCGACGCAAAGGTGCGCCAGGCCATCAGCGTGGCGATCGACCGG
GACCTGATCGCCGCGCGCGTGACCAAGGGCGATTCCGTGCCGGCTGGCCAACTCGTGCCACAGGGCTTCTTCGGCTTTGC
ACGCGCCGTGGCCGCGCCGCACGGCGACGCGGCGCTAGCCCGCCGGCTGCTCGCCGAAGCCGGCTATCCGGCGGGCTTCC
GCCTGACGCTGCATTGCCCCAACGACCGCTACCTGAACGATGCCAAGACCTGCGAGGCGATCGGCCAGATGCTGACCCGC
GCGGGCATCCGGACCGAGGTGCGCACGTTGCCCTATTCGGTGTACATCACGCGCGCCACGTCGGGCGGGGAGGGCGGCAA
GCCAGAGTTCAGCGCCTTCATGCTTGGCATCGGGGCGGTCAGCGGCGATTCGCTGGAACCGCTGGTGGCCGCCGCTCACT
CGCAGGACAAGAAGGCCGGCCTGGGTGCCAACAACCGCAGCGGCTATGCGAACGCCGCCGTCGACACGCTGGTCGACGAA
GCGATGCGCACGATGGACCCGCCCGCGCGCGAGCAGGTGCAGCGCCAGGCGGCCGTGACGTTGGCCGAAGACGTTGGCGT
GGTGCCGCTGCACCACCTGCGCGCGACGTGGGCCTACCGCAACGGCCTGGCCGTGAAGCCGCGCAGCGATGGCTTCACCT
ACGCCATGAACATTCGACCGGCCGCACGCCCCTGA

Upstream 100 bases:

>100_bases
GCCCGTCTTTTCCCTGCACGTCCCGATAGCGGGTAAACCCTGCTTACTCGCGTCACTTCTTTGTCTTATTCTTCGATACA
CAGTATCACGGAATGAAACA

Downstream 100 bases:

>100_bases
GGCACCGCAGCCATCCCCGGAAGCAACCATGCTGGAAACCCTTCTCAAACGGCTGCTGCAGAGCATTGTGGTGCTCTGGA
TCATGTCCGTCCTGACCTTC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MFQQTKTTTPAGGRRHWAAMLVLAGMLVLAGAGSARAADLRIGYKAEISAADPHVLDAAGRNLWGHVYETLVGLDNELHP
VAQLATGWRQVDARTWEFQLRPGVRFSNGEPFTAEDARYSIERARHLAGARTFRTYLKSIAEVQVTGPLTLRVVTRTPNP
VLPQNVGLVAMLPRSLGGAVKEADFATGRAAIGTGPYRFVAWEHGQQLTFARNPTYWGALEPWGHVVFQFMAKEPARASA
LLSGLVDMIDASSASIADAFTRTNGRIRTVSATSYMLNYLQLDQARKVSPYVSDNQGKPLGANPLRDAKVRQAISVAIDR
DLIAARVTKGDSVPAGQLVPQGFFGFARAVAAPHGDAALARRLLAEAGYPAGFRLTLHCPNDRYLNDAKTCEAIGQMLTR
AGIRTEVRTLPYSVYITRATSGGEGGKPEFSAFMLGIGAVSGDSLEPLVAAAHSQDKKAGLGANNRSGYANAAVDTLVDE
AMRTMDPPAREQVQRQAAVTLAEDVGVVPLHHLRATWAYRNGLAVKPRSDGFTYAMNIRPAARP

Sequences:

>Translated_544_residues
MFQQTKTTTPAGGRRHWAAMLVLAGMLVLAGAGSARAADLRIGYKAEISAADPHVLDAAGRNLWGHVYETLVGLDNELHP
VAQLATGWRQVDARTWEFQLRPGVRFSNGEPFTAEDARYSIERARHLAGARTFRTYLKSIAEVQVTGPLTLRVVTRTPNP
VLPQNVGLVAMLPRSLGGAVKEADFATGRAAIGTGPYRFVAWEHGQQLTFARNPTYWGALEPWGHVVFQFMAKEPARASA
LLSGLVDMIDASSASIADAFTRTNGRIRTVSATSYMLNYLQLDQARKVSPYVSDNQGKPLGANPLRDAKVRQAISVAIDR
DLIAARVTKGDSVPAGQLVPQGFFGFARAVAAPHGDAALARRLLAEAGYPAGFRLTLHCPNDRYLNDAKTCEAIGQMLTR
AGIRTEVRTLPYSVYITRATSGGEGGKPEFSAFMLGIGAVSGDSLEPLVAAAHSQDKKAGLGANNRSGYANAAVDTLVDE
AMRTMDPPAREQVQRQAAVTLAEDVGVVPLHHLRATWAYRNGLAVKPRSDGFTYAMNIRPAARP
>Mature_544_residues
MFQQTKTTTPAGGRRHWAAMLVLAGMLVLAGAGSARAADLRIGYKAEISAADPHVLDAAGRNLWGHVYETLVGLDNELHP
VAQLATGWRQVDARTWEFQLRPGVRFSNGEPFTAEDARYSIERARHLAGARTFRTYLKSIAEVQVTGPLTLRVVTRTPNP
VLPQNVGLVAMLPRSLGGAVKEADFATGRAAIGTGPYRFVAWEHGQQLTFARNPTYWGALEPWGHVVFQFMAKEPARASA
LLSGLVDMIDASSASIADAFTRTNGRIRTVSATSYMLNYLQLDQARKVSPYVSDNQGKPLGANPLRDAKVRQAISVAIDR
DLIAARVTKGDSVPAGQLVPQGFFGFARAVAAPHGDAALARRLLAEAGYPAGFRLTLHCPNDRYLNDAKTCEAIGQMLTR
AGIRTEVRTLPYSVYITRATSGGEGGKPEFSAFMLGIGAVSGDSLEPLVAAAHSQDKKAGLGANNRSGYANAAVDTLVDE
AMRTMDPPAREQVQRQAAVTLAEDVGVVPLHHLRATWAYRNGLAVKPRSDGFTYAMNIRPAARP

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=509, Percent_Identity=24.3614931237721, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1787495, Length=558, Percent_Identity=24.1935483870968, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787762, Length=515, Percent_Identity=26.0194174757282, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1789966, Length=536, Percent_Identity=22.9477611940299, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789887, Length=373, Percent_Identity=24.9329758713137, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI87082063, Length=267, Percent_Identity=22.4719101123595, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58576; Mature: 58576

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQQTKTTTPAGGRRHWAAMLVLAGMLVLAGAGSARAADLRIGYKAEISAADPHVLDAAG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCHHHHHC
RNLWGHVYETLVGLDNELHPVAQLATGWRQVDARTWEFQLRPGVRFSNGEPFTAEDARYS
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCEECCCCCCCCCHHHHH
IERARHLAGARTFRTYLKSIAEVQVTGPLTLRVVTRTPNPVLPQNVGLVAMLPRSLGGAV
HHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCCCCCCCCCEEEECCHHHCCHH
KEADFATGRAAIGTGPYRFVAWEHGQQLTFARNPTYWGALEPWGHVVFQFMAKEPARASA
HHCCCCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHH
LLSGLVDMIDASSASIADAFTRTNGRIRTVSATSYMLNYLQLDQARKVSPYVSDNQGKPL
HHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GANPLRDAKVRQAISVAIDRDLIAARVTKGDSVPAGQLVPQGFFGFARAVAAPHGDAALA
CCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
RRLLAEAGYPAGFRLTLHCPNDRYLNDAKTCEAIGQMLTRAGIRTEVRTLPYSVYITRAT
HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEEEEC
SGGEGGKPEFSAFMLGIGAVSGDSLEPLVAAAHSQDKKAGLGANNRSGYANAAVDTLVDE
CCCCCCCCCHHHHEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHH
AMRTMDPPAREQVQRQAAVTLAEDVGVVPLHHLRATWAYRNGLAVKPRSDGFTYAMNIRP
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEEECCC
AARP
CCCC
>Mature Secondary Structure
MFQQTKTTTPAGGRRHWAAMLVLAGMLVLAGAGSARAADLRIGYKAEISAADPHVLDAAG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCHHHHHC
RNLWGHVYETLVGLDNELHPVAQLATGWRQVDARTWEFQLRPGVRFSNGEPFTAEDARYS
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCEECCCCCCCCCHHHHH
IERARHLAGARTFRTYLKSIAEVQVTGPLTLRVVTRTPNPVLPQNVGLVAMLPRSLGGAV
HHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCCCCCCCCCEEEECCHHHCCHH
KEADFATGRAAIGTGPYRFVAWEHGQQLTFARNPTYWGALEPWGHVVFQFMAKEPARASA
HHCCCCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHH
LLSGLVDMIDASSASIADAFTRTNGRIRTVSATSYMLNYLQLDQARKVSPYVSDNQGKPL
HHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GANPLRDAKVRQAISVAIDRDLIAARVTKGDSVPAGQLVPQGFFGFARAVAAPHGDAALA
CCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
RRLLAEAGYPAGFRLTLHCPNDRYLNDAKTCEAIGQMLTRAGIRTEVRTLPYSVYITRAT
HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEEEEC
SGGEGGKPEFSAFMLGIGAVSGDSLEPLVAAAHSQDKKAGLGANNRSGYANAAVDTLVDE
CCCCCCCCCHHHHEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHH
AMRTMDPPAREQVQRQAAVTLAEDVGVVPLHHLRATWAYRNGLAVKPRSDGFTYAMNIRP
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEEECCC
AARP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]