Click here to switch to the map view.

The map label for this gene is osmY [C]

Identifier: 73540915

GI number: 73540915

Start: 1305036

End: 1305680

Strand: Direct

Name: osmY [C]

Synonym: Reut_A1220

Alternate gene names: 73540915

Gene position: 1305036-1305680 (Clockwise)

Preceding gene: 73540914

Following gene: 73540916

Centisome position: 34.28

GC content: 63.72

Gene sequence:

>645_bases
ATGAAAACTGATCTACAACTCAAGAAAGACGTCACGGACGAGCTGGACTGGGATCCCGCCATCGATGCGGCAGCCATTGG
CGTGGAGGTACGCGAGGGCGTGGTAACGCTCAGCGGTCACCTGCCCAGCTATGCCGAGAAGCTTGCAGCCGAGCGTGCTG
CGGAAAAGGTCTCTGGCGTGCGCGCGGTGGTCGTGAACCTCGATGTCCGGCCCACGGGGGAATTCAGCGATGAGGCGATT
GCCACCGCCGCAGGGGATGCTCTGCAATGGCATGTGCACGTGCCTGCCGATGCGGTCAAGCTGCGCGTGGAGAAGGGCCG
CGTCACGCTGACGGGCGAGGTGGAGTGGGGTTACCAGCGCAAGCTCGCCGAGCGTACCGTGTCGCAGTTGCGCGGTGTGA
CCGGTGTGACGAACCATATCAAGATGAGGATGCGCCCCGCGCCCGACGATGTGGTCGAACGCATTGAAGCTGCGTTGCGC
CGGCATGCCGAGCGTGAAGCGAAGCACATCAATGTCTCGATGAAAGAGGGCACGGTGACGCTGAGCGGCCGGGTAGATTC
ACGCGCGCAACGACTGGCCGCAGTTGGTGCGGCCTGGTCTGCGCCCGGAGTTGGCGCCGTGGTGGACGACCTGGAATTGT
CCTGA

Upstream 100 bases:

>100_bases
CCGTGGCTGGCAAAGGAACGAACTTTCAGGAACGGTATGAGCGGTTGCCGCGCAGGCGCGTCGCATGCCGTTCTGCAACG
CCATGTTGTGAGATGTCTCG

Downstream 100 bases:

>100_bases
GCGCACCGGGAAGGTGAGGCGCTGGCGCCCATCTTCCCGATCAGGTGAGTGGCGCGATGCCCCGGAATTCCGGTTACTTC
CCGATCTCCATGAAGAACCT

Product: transport-associated protein

Products: NA

Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKTDLQLKKDVTDELDWDPAIDAAAIGVEVREGVVTLSGHLPSYAEKLAAERAAEKVSGVRAVVVNLDVRPTGEFSDEAI
ATAAGDALQWHVHVPADAVKLRVEKGRVTLTGEVEWGYQRKLAERTVSQLRGVTGVTNHIKMRMRPAPDDVVERIEAALR
RHAEREAKHINVSMKEGTVTLSGRVDSRAQRLAAVGAAWSAPGVGAVVDDLELS

Sequences:

>Translated_214_residues
MKTDLQLKKDVTDELDWDPAIDAAAIGVEVREGVVTLSGHLPSYAEKLAAERAAEKVSGVRAVVVNLDVRPTGEFSDEAI
ATAAGDALQWHVHVPADAVKLRVEKGRVTLTGEVEWGYQRKLAERTVSQLRGVTGVTNHIKMRMRPAPDDVVERIEAALR
RHAEREAKHINVSMKEGTVTLSGRVDSRAQRLAAVGAAWSAPGVGAVVDDLELS
>Mature_214_residues
MKTDLQLKKDVTDELDWDPAIDAAAIGVEVREGVVTLSGHLPSYAEKLAAERAAEKVSGVRAVVVNLDVRPTGEFSDEAI
ATAAGDALQWHVHVPADAVKLRVEKGRVTLTGEVEWGYQRKLAERTVSQLRGVTGVTNHIKMRMRPAPDDVVERIEAALR
RHAEREAKHINVSMKEGTVTLSGRVDSRAQRLAAVGAAWSAPGVGAVVDDLELS

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23125; Mature: 23125

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDLQLKKDVTDELDWDPAIDAAAIGVEVREGVVTLSGHLPSYAEKLAAERAAEKVSGV
CCCCCCHHHCCCCCCCCCCCCCHHHHCEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCE
RAVVVNLDVRPTGEFSDEAIATAAGDALQWHVHVPADAVKLRVEKGRVTLTGEVEWGYQR
EEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCHHEEEEEECCEEEEEEEECCCHHH
KLAERTVSQLRGVTGVTNHIKMRMRPAPDDVVERIEAALRRHAEREAKHINVSMKEGTVT
HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEE
LSGRVDSRAQRLAAVGAAWSAPGVGAVVDDLELS
EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTDLQLKKDVTDELDWDPAIDAAAIGVEVREGVVTLSGHLPSYAEKLAAERAAEKVSGV
CCCCCCHHHCCCCCCCCCCCCCHHHHCEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCE
RAVVVNLDVRPTGEFSDEAIATAAGDALQWHVHVPADAVKLRVEKGRVTLTGEVEWGYQR
EEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCHHEEEEEECCEEEEEEEECCCHHH
KLAERTVSQLRGVTGVTNHIKMRMRPAPDDVVERIEAALRRHAEREAKHINVSMKEGTVT
HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEE
LSGRVDSRAQRLAAVGAAWSAPGVGAVVDDLELS
EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA