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The map label for this gene is ybcL [C]

Identifier: 73540874

GI number: 73540874

Start: 1261662

End: 1262228

Strand: Reverse

Name: ybcL [C]

Synonym: Reut_A1177

Alternate gene names: 73540874

Gene position: 1262228-1261662 (Counterclockwise)

Preceding gene: 73540878

Following gene: 73540873

Centisome position: 33.16

GC content: 62.43

Gene sequence:

>567_bases
ATGGTGCGTTTGGCACATCTACCGAGATTGCTGGCCTTTGCGGCCATGCTGTCCGGACCAGCGCTACTTGCTCAGCAGAG
GCCATCCATGCCGCTCATACTGACATCCTCCGCGTTTGCCCAAGGCGGGGAGATTCCCACTGTGCACACGTGCGAAGGCG
CCGATGTGTCACCGCCCCTGACGTGGTCAGGGTTGCCCCCCTCCACTGCCAGCCTGGTCTTGATTGTCGATGATCCGGAT
GCGCCGGACCCGGCGTCACCGCAAATGACATGGGTCCATTGGCTCGTGTACAACCTACCTCCGCTCCCCGGCTCGCTTGC
GCAAGGGATGAGCCGGCATAGCTTGCCGGCCGGCGCTCGCGAAGGAATCAACGACTGGCATCGTGCCGATTACGGCGGCC
CGTGTCCTCCAATTGGCCGGCACCGGTATTTCCACAAGCTATATGCCATGGACGTCGTGCTGCCAGATCTCGGCAAGCCG
GACAAGGCGGCGCTGGAACAGGCGATGCGGGGGCATATTCTGGCGCATGCCAACCTCATTGGGACCTACCAGAAGCATGC
GCGCTGA

Upstream 100 bases:

>100_bases
ATACCCGTGCTGGGTCGGGTTTTGAAAGGGGACGTTCCCTTGTACAGGGGATGAATCCCGGCTAAGTTGGAACAGCCATC
ATGGGCCGGCGGGGGCAGAT

Downstream 100 bases:

>100_bases
CGTAGTCGTGCAGGCGGGACCATCAATCTTTCACCTTTACCTCATCTCCGTCGGGGCTCTTGCATTCCTGGAGTTTTCCA
AACACCTGCGCGACTAACGG

Product: PBP family phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MVRLAHLPRLLAFAAMLSGPALLAQQRPSMPLILTSSAFAQGGEIPTVHTCEGADVSPPLTWSGLPPSTASLVLIVDDPD
APDPASPQMTWVHWLVYNLPPLPGSLAQGMSRHSLPAGAREGINDWHRADYGGPCPPIGRHRYFHKLYAMDVVLPDLGKP
DKAALEQAMRGHILAHANLIGTYQKHAR

Sequences:

>Translated_188_residues
MVRLAHLPRLLAFAAMLSGPALLAQQRPSMPLILTSSAFAQGGEIPTVHTCEGADVSPPLTWSGLPPSTASLVLIVDDPD
APDPASPQMTWVHWLVYNLPPLPGSLAQGMSRHSLPAGAREGINDWHRADYGGPCPPIGRHRYFHKLYAMDVVLPDLGKP
DKAALEQAMRGHILAHANLIGTYQKHAR
>Mature_188_residues
MVRLAHLPRLLAFAAMLSGPALLAQQRPSMPLILTSSAFAQGGEIPTVHTCEGADVSPPLTWSGLPPSTASLVLIVDDPD
APDPASPQMTWVHWLVYNLPPLPGSLAQGMSRHSLPAGAREGINDWHRADYGGPCPPIGRHRYFHKLYAMDVVLPDLGKP
DKAALEQAMRGHILAHANLIGTYQKHAR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=174, Percent_Identity=34.4827586206897, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1786990, Length=162, Percent_Identity=29.6296296296296, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20278; Mature: 20278

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLAHLPRLLAFAAMLSGPALLAQQRPSMPLILTSSAFAQGGEIPTVHTCEGADVSPPL
CCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECCHHHCCCCCCEEEECCCCCCCCCC
TWSGLPPSTASLVLIVDDPDAPDPASPQMTWVHWLVYNLPPLPGSLAQGMSRHSLPAGAR
EECCCCCCCCEEEEEECCCCCCCCCCCCHHEEEHHHHCCCCCCCHHHHHHHHCCCCCCHH
EGINDWHRADYGGPCPPIGRHRYFHKLYAMDVVLPDLGKPDKAALEQAMRGHILAHANLI
HCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
GTYQKHAR
HHHHHHCC
>Mature Secondary Structure
MVRLAHLPRLLAFAAMLSGPALLAQQRPSMPLILTSSAFAQGGEIPTVHTCEGADVSPPL
CCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECCHHHCCCCCCEEEECCCCCCCCCC
TWSGLPPSTASLVLIVDDPDAPDPASPQMTWVHWLVYNLPPLPGSLAQGMSRHSLPAGAR
EECCCCCCCCEEEEEECCCCCCCCCCCCHHEEEHHHHCCCCCCCHHHHHHHHCCCCCCHH
EGINDWHRADYGGPCPPIGRHRYFHKLYAMDVVLPDLGKPDKAALEQAMRGHILAHANLI
HCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
GTYQKHAR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]