| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is ppsA [H]
Identifier: 73540861
GI number: 73540861
Start: 1247489
End: 1249888
Strand: Direct
Name: ppsA [H]
Synonym: Reut_A1162
Alternate gene names: 73540861
Gene position: 1247489-1249888 (Clockwise)
Preceding gene: 73540860
Following gene: 73540862
Centisome position: 32.77
GC content: 57.88
Gene sequence:
>2400_bases ATGGCTATCAATACCACGCAGTTAGTCTGGTTTGAGGAACTTCGGCGTGCCGACATCTGGCGCGTGGGCGGCAAGAACGC CTCGCTGGGTGAACTGTTAGCCAGCCTGACAACTCACGGCATCCGTGTGCCCCCCGGGTTCGCCATTCCTGTCGACGCTT ACTGGAATTTCCTTGAGGCAAACGGCTTGCGCGCAGTGCTGTCATCAACGCTTTCTGCCCTTGCCAGCGGAAAGCTCACT CTGTCTGACGCAGGGCAGAAGATGCGCCGCACAATCCTCACCGGCGAGTGGCCCAGAGAGACCGCTCAGGCGATTGGGCA GGCCTATGCCACCCTGAATAGGCGGACCGGCCAGTCCAACGTGGACGTCGCGGTACGTTCCAGTGCCACCGCCGAAGATC TTCCGGAGGCGAGCTTTGCAGGGCAGCTGGAGTCCTATCTCAACATCAGAGGCGAGCACGCTTTGCTCGACGCCTGCCGC CGTTGCTACGCGTCCCTTTTCACCGATCGGGCAATCAGCTACCGCCAAGCGAAGGGAATCAATCACCTGCAGATTGGGCT GTCCGTCGGTGTGCAGCGCATGGTGCGCTCTGACCTGAGTGGCGCTGGTGTGATGTTCTCCATCGATACCGAAACCGGCT TCGATAAAGTGGTTCTCATCAACGCGGCATGGGGGCTGGGTGAGAACGTCGTCCAGGGAGACGTCGATCCCGACGAGTAC GAAGTGTTCAAGCCGTTGCTGTCAGATCTTTCCCTCACGCCTATCGTCGGGAAAAAGCTGGGCACCAAGGCCAGGAAGCT CATATACACAAGCGATTCTACCTGCCCGACAAGGAATGTATCCACGACCTCAGGAGAACGCGAAGCTTTCGTGCTGAGCG ACGAGGAAATCCTCACGTTATCGCGTTGGGCCTGCGCGATCGCCGATCACTACGGCCAGCCCATGGACATTGAATGGGCG AAAGACGGCAAAACGGGAGAGCTATTCATTGTGCAGGCCCGCCCTGAAACCGTCCAGTCACGACGCGAATCAAGTGCGAT CAAGACCTATCGTATCAAGAAAGCTGGCATGCCATTGGTTACCGGTGTAAGCATTGGTGATGCCATCGCGACCGGTCCTA TTTGTGTCATCGAGAATTTGCGAGAGATGGGGCGCTTCGTCGATGGCGCTGTGCTCGTGACACGGACGACCGATCCCGAC TGGGTACCTGTAATGCGGCGCGCGGCTGCAATTGTCACCGACCAGGGAGGGAGAACTTCCCATGCGGCGATAGTCAGCCG GGAGCTAGGGCTTCCCGCAATTGTCGGGACGGGCAATGCAACTGGCGTGCTGCATGAGAAACAGGATGTGACGGTGTCTT GTGCCGAAGGCCGGGAGGGCTTTGTTTACGAAGGTATCGCCGAGTACGAAGTCGAGGAGATCGATTTTGGCAGTATCCCG ACGACCCGCACCAAAGTCATGCTGAATTTGGCAAATCCGGCGGCAGCATTTCGCTGGTGGCGAATGCCCGCCGACGGCGT CGGGTTGGCGCGGATGGAGTTTGTAGTGAGCAACCATATCAAGATCCATCCAATGGCGCTGGCGCGCTACGACACTCTCA AGGACGACACAGCAAAGCGAACCATCGCTGAGCTGACGGCTGCTTACGCCAGCAAGACAGAGTACTTTGTGAGCCGGCTC GCGCGTGGATTGGGAAGGATTGCCGCCGTGCAATATCCGCGACCTGTGCTCGTTCGCATGAGCGATTTCAAGACGAATGA ATATGCGCGGCTGATTGGTGGAGCGGAGTTCGAACCTACGGAGGAGAATCCCATGCTCGGATTCCGTGGGGCTTCAAGAT ACTATTCACCCCTCTATCGGGATGGGTTTGCCTTGGAGTGCCAAGCGATCGTCCGCCTGCGCAAACAAATGGGCTTAAAC AATGTCATTGTCATGATTCCCTTCTGCCGGTCCACCAAAGAAGCGGATCTGGTGCTCGAGGTAATGGCGGAGAATGGCAT CGTGCGCCACAAGGATGGACTTGAGGTCTACGTGATGTGCGAAATTCCGTCCAATGTCATCCTGGCAAAGGCTTTCGCCC AACGCTTCGACGGCTTCTCGATTGGCAGCAATGACCTGACACAGTTGGTGCTCGGCGTGGATCGCGACTCGGCCAATCTT GCTGGCTTGTTCGACGAGGAAGACGACGCGGTCAAATGGATGATCCGGAACGTTATTACACAGGCGCATGAGGCCAACGC CCACGTGGGCTTGTGCGGCCAAGCGCCGAGTGATCACCCTGATTTCGCCGGATTCCTTGTCCAATGCGGAATCGACTCGA TCTCCGTGACCCCCGACAGCTTCCTGGCAGTTAAGCGCGCCGTTGCTGCGGCTGAAGCAGCTATCGCGTCAGTACGCTGA
Upstream 100 bases:
>100_bases CCCGCGCCGACCTCACGGTCTGACGCTGATGACAGGTGCGGCGTGCAGCCTATGCCGATAAGGTCGTTGCGCGTCAGGTG GAAGACTAGAGGAGCAGTTG
Downstream 100 bases:
>100_bases GCAGCGTTGGACCGAGTGCGTGTCGCATCGCTGCTTTGATATTCGGCAACAACAGCCAACGCCTATTGGTTCTACATGCG CCGCTCAGCAATTTTGAGCA
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 799; Mature: 798
Protein sequence:
>799_residues MAINTTQLVWFEELRRADIWRVGGKNASLGELLASLTTHGIRVPPGFAIPVDAYWNFLEANGLRAVLSSTLSALASGKLT LSDAGQKMRRTILTGEWPRETAQAIGQAYATLNRRTGQSNVDVAVRSSATAEDLPEASFAGQLESYLNIRGEHALLDACR RCYASLFTDRAISYRQAKGINHLQIGLSVGVQRMVRSDLSGAGVMFSIDTETGFDKVVLINAAWGLGENVVQGDVDPDEY EVFKPLLSDLSLTPIVGKKLGTKARKLIYTSDSTCPTRNVSTTSGEREAFVLSDEEILTLSRWACAIADHYGQPMDIEWA KDGKTGELFIVQARPETVQSRRESSAIKTYRIKKAGMPLVTGVSIGDAIATGPICVIENLREMGRFVDGAVLVTRTTDPD WVPVMRRAAAIVTDQGGRTSHAAIVSRELGLPAIVGTGNATGVLHEKQDVTVSCAEGREGFVYEGIAEYEVEEIDFGSIP TTRTKVMLNLANPAAAFRWWRMPADGVGLARMEFVVSNHIKIHPMALARYDTLKDDTAKRTIAELTAAYASKTEYFVSRL ARGLGRIAAVQYPRPVLVRMSDFKTNEYARLIGGAEFEPTEENPMLGFRGASRYYSPLYRDGFALECQAIVRLRKQMGLN NVIVMIPFCRSTKEADLVLEVMAENGIVRHKDGLEVYVMCEIPSNVILAKAFAQRFDGFSIGSNDLTQLVLGVDRDSANL AGLFDEEDDAVKWMIRNVITQAHEANAHVGLCGQAPSDHPDFAGFLVQCGIDSISVTPDSFLAVKRAVAAAEAAIASVR
Sequences:
>Translated_799_residues MAINTTQLVWFEELRRADIWRVGGKNASLGELLASLTTHGIRVPPGFAIPVDAYWNFLEANGLRAVLSSTLSALASGKLT LSDAGQKMRRTILTGEWPRETAQAIGQAYATLNRRTGQSNVDVAVRSSATAEDLPEASFAGQLESYLNIRGEHALLDACR RCYASLFTDRAISYRQAKGINHLQIGLSVGVQRMVRSDLSGAGVMFSIDTETGFDKVVLINAAWGLGENVVQGDVDPDEY EVFKPLLSDLSLTPIVGKKLGTKARKLIYTSDSTCPTRNVSTTSGEREAFVLSDEEILTLSRWACAIADHYGQPMDIEWA KDGKTGELFIVQARPETVQSRRESSAIKTYRIKKAGMPLVTGVSIGDAIATGPICVIENLREMGRFVDGAVLVTRTTDPD WVPVMRRAAAIVTDQGGRTSHAAIVSRELGLPAIVGTGNATGVLHEKQDVTVSCAEGREGFVYEGIAEYEVEEIDFGSIP TTRTKVMLNLANPAAAFRWWRMPADGVGLARMEFVVSNHIKIHPMALARYDTLKDDTAKRTIAELTAAYASKTEYFVSRL ARGLGRIAAVQYPRPVLVRMSDFKTNEYARLIGGAEFEPTEENPMLGFRGASRYYSPLYRDGFALECQAIVRLRKQMGLN NVIVMIPFCRSTKEADLVLEVMAENGIVRHKDGLEVYVMCEIPSNVILAKAFAQRFDGFSIGSNDLTQLVLGVDRDSANL AGLFDEEDDAVKWMIRNVITQAHEANAHVGLCGQAPSDHPDFAGFLVQCGIDSISVTPDSFLAVKRAVAAAEAAIASVR >Mature_798_residues AINTTQLVWFEELRRADIWRVGGKNASLGELLASLTTHGIRVPPGFAIPVDAYWNFLEANGLRAVLSSTLSALASGKLTL SDAGQKMRRTILTGEWPRETAQAIGQAYATLNRRTGQSNVDVAVRSSATAEDLPEASFAGQLESYLNIRGEHALLDACRR CYASLFTDRAISYRQAKGINHLQIGLSVGVQRMVRSDLSGAGVMFSIDTETGFDKVVLINAAWGLGENVVQGDVDPDEYE VFKPLLSDLSLTPIVGKKLGTKARKLIYTSDSTCPTRNVSTTSGEREAFVLSDEEILTLSRWACAIADHYGQPMDIEWAK DGKTGELFIVQARPETVQSRRESSAIKTYRIKKAGMPLVTGVSIGDAIATGPICVIENLREMGRFVDGAVLVTRTTDPDW VPVMRRAAAIVTDQGGRTSHAAIVSRELGLPAIVGTGNATGVLHEKQDVTVSCAEGREGFVYEGIAEYEVEEIDFGSIPT TRTKVMLNLANPAAAFRWWRMPADGVGLARMEFVVSNHIKIHPMALARYDTLKDDTAKRTIAELTAAYASKTEYFVSRLA RGLGRIAAVQYPRPVLVRMSDFKTNEYARLIGGAEFEPTEENPMLGFRGASRYYSPLYRDGFALECQAIVRLRKQMGLNN VIVMIPFCRSTKEADLVLEVMAENGIVRHKDGLEVYVMCEIPSNVILAKAFAQRFDGFSIGSNDLTQLVLGVDRDSANLA GLFDEEDDAVKWMIRNVITQAHEANAHVGLCGQAPSDHPDFAGFLVQCGIDSISVTPDSFLAVKRAVAAAEAAIASVR
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=778, Percent_Identity=48.7146529562982, Blast_Score=761, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=411, Percent_Identity=26.0340632603406, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1789193, Length=417, Percent_Identity=26.1390887290168, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI48994992, Length=373, Percent_Identity=25.201072386059, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1788726, Length=193, Percent_Identity=30.5699481865285, Blast_Score=86, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17564524, Length=235, Percent_Identity=31.063829787234, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87161; Mature: 87030
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINTTQLVWFEELRRADIWRVGGKNASLGELLASLTTHGIRVPPGFAIPVDAYWNFLEA CCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHC NGLRAVLSSTLSALASGKLTLSDAGQKMRRTILTGEWPRETAQAIGQAYATLNRRTGQSN CCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC VDVAVRSSATAEDLPEASFAGQLESYLNIRGEHALLDACRRCYASLFTDRAISYRQAKGI CCEEEECCCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC NHLQIGLSVGVQRMVRSDLSGAGVMFSIDTETGFDKVVLINAAWGLGENVVQGDVDPDEY CEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEECCCCCHHH EVFKPLLSDLSLTPIVGKKLGTKARKLIYTSDSTCPTRNVSTTSGEREAFVLSDEEILTL HHHHHHHHCCCCCCHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHH SRWACAIADHYGQPMDIEWAKDGKTGELFIVQARPETVQSRRESSAIKTYRIKKAGMPLV HHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHCCHHEEEEHHCCCCEE TGVSIGDAIATGPICVIENLREMGRFVDGAVLVTRTTDPDWVPVMRRAAAIVTDQGGRTS ECCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHEEECCCCCCC HAAIVSRELGLPAIVGTGNATGVLHEKQDVTVSCAEGREGFVYEGIAEYEVEEIDFGSIP HHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCEECCHHHCCCEECCCCCCC TTRTKVMLNLANPAAAFRWWRMPADGVGLARMEFVVSNHIKIHPMALARYDTLKDDTAKR CCCEEEEEEECCCHHHHHEECCCCCCCCHHHHHHHHHCCEEEEEEEHHHHHCCCCHHHHH TIAELTAAYASKTEYFVSRLARGLGRIAAVQYPRPVLVRMSDFKTNEYARLIGGAEFEPT HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHCCCCCCCC EENPMLGFRGASRYYSPLYRDGFALECQAIVRLRKQMGLNNVIVMIPFCRSTKEADLVLE CCCCCEEECCCHHHHCHHHCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH VMAENGIVRHKDGLEVYVMCEIPSNVILAKAFAQRFDGFSIGSNDLTQLVLGVDRDSANL HHHHCCEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCE AGLFDEEDDAVKWMIRNVITQAHEANAHVGLCGQAPSDHPDFAGFLVQCGIDSISVTPDS EECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCCEECCCHH FLAVKRAVAAAEAAIASVR HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AINTTQLVWFEELRRADIWRVGGKNASLGELLASLTTHGIRVPPGFAIPVDAYWNFLEA CCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHC NGLRAVLSSTLSALASGKLTLSDAGQKMRRTILTGEWPRETAQAIGQAYATLNRRTGQSN CCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC VDVAVRSSATAEDLPEASFAGQLESYLNIRGEHALLDACRRCYASLFTDRAISYRQAKGI CCEEEECCCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC NHLQIGLSVGVQRMVRSDLSGAGVMFSIDTETGFDKVVLINAAWGLGENVVQGDVDPDEY CEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEECCCCCHHH EVFKPLLSDLSLTPIVGKKLGTKARKLIYTSDSTCPTRNVSTTSGEREAFVLSDEEILTL HHHHHHHHCCCCCCHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHH SRWACAIADHYGQPMDIEWAKDGKTGELFIVQARPETVQSRRESSAIKTYRIKKAGMPLV HHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHCCHHEEEEHHCCCCEE TGVSIGDAIATGPICVIENLREMGRFVDGAVLVTRTTDPDWVPVMRRAAAIVTDQGGRTS ECCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHEEECCCCCCC HAAIVSRELGLPAIVGTGNATGVLHEKQDVTVSCAEGREGFVYEGIAEYEVEEIDFGSIP HHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCEECCHHHCCCEECCCCCCC TTRTKVMLNLANPAAAFRWWRMPADGVGLARMEFVVSNHIKIHPMALARYDTLKDDTAKR CCCEEEEEEECCCHHHHHEECCCCCCCCHHHHHHHHHCCEEEEEEEHHHHHCCCCHHHHH TIAELTAAYASKTEYFVSRLARGLGRIAAVQYPRPVLVRMSDFKTNEYARLIGGAEFEPT HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHCCCCCCCC EENPMLGFRGASRYYSPLYRDGFALECQAIVRLRKQMGLNNVIVMIPFCRSTKEADLVLE CCCCCEEECCCHHHHCHHHCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH VMAENGIVRHKDGLEVYVMCEIPSNVILAKAFAQRFDGFSIGSNDLTQLVLGVDRDSANL HHHHCCEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCE AGLFDEEDDAVKWMIRNVITQAHEANAHVGLCGQAPSDHPDFAGFLVQCGIDSISVTPDS EECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCCEECCCHH FLAVKRAVAAAEAAIASVR HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]