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The map label for this gene is ycdI [C]

Identifier: 73540833

GI number: 73540833

Start: 1226295

End: 1226861

Strand: Direct

Name: ycdI [C]

Synonym: Reut_A1131

Alternate gene names: 73540833

Gene position: 1226295-1226861 (Clockwise)

Preceding gene: 73540831

Following gene: 73540834

Centisome position: 32.22

GC content: 59.79

Gene sequence:

>567_bases
ATGATGAAAAGCCGACTGCCCTCCGCATCTCTTACCAGCTGTTTCGGCTCGCGAGAGCCTACAACGAGTATTCATGAACG
TTACGAATTGCTCAAGTGGGGTCCTACCTCCGCCAACAGCTGCCCGGCGCGCTTCGTCTGGGTCAAGAGCGACGCCGGTA
AGGCCAGACTTGCCGCGCTCGCGGCGGAGACGAATCGCCCCAAAATTCTCTCGGCGCCGTTGACCGTCATCATTGGCCAT
GACTTTGGTTTTCCGGACCTGATGCCGCGGTTATTTCCGGCTCGCGGCGACATGCTGCGCAACATGTTTAGTGAACCGCA
TATGGCCGAGATCACGGCGACGCGCAACGGCACGCTTCAGGGGGGCTATTTGATCATGGCCGCCCGCGCACTTGGTCTGG
ATTGCGGCCCTATGTCTGGCTTCGACAACGCCGCAGTCGATCAGGAGTTCTTCGCGGACACGGGCATTCGATCCAATTTC
ATCTGCTGCCTTGGATACGGAAAGCCGGACACGCCCTTTCCGCGCAACCCGCGGCTGATCTTCGAAGAGGCCGGACGGTG
GGCATGA

Upstream 100 bases:

>100_bases
TAATCGTTAGATGGGAAAGATCAAAATTTAGTCACTTTTGCGGATGAGTCAAGTCTCTTATCTTTCTTACCACCCCCAAA
ATTACCGTGAACGGCACATC

Downstream 100 bases:

>100_bases
TTCGCCCCGATCATCATCCGTGTTGTTGCTTGACCCCATGCCAACCCAGGCAGCGCTTCAAAGCGAGTCGCGCAGGCTAG
GGCGGCCTATCCACGCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MMKSRLPSASLTSCFGSREPTTSIHERYELLKWGPTSANSCPARFVWVKSDAGKARLAALAAETNRPKILSAPLTVIIGH
DFGFPDLMPRLFPARGDMLRNMFSEPHMAEITATRNGTLQGGYLIMAARALGLDCGPMSGFDNAAVDQEFFADTGIRSNF
ICCLGYGKPDTPFPRNPRLIFEEAGRWA

Sequences:

>Translated_188_residues
MMKSRLPSASLTSCFGSREPTTSIHERYELLKWGPTSANSCPARFVWVKSDAGKARLAALAAETNRPKILSAPLTVIIGH
DFGFPDLMPRLFPARGDMLRNMFSEPHMAEITATRNGTLQGGYLIMAARALGLDCGPMSGFDNAAVDQEFFADTGIRSNF
ICCLGYGKPDTPFPRNPRLIFEEAGRWA
>Mature_188_residues
MMKSRLPSASLTSCFGSREPTTSIHERYELLKWGPTSANSCPARFVWVKSDAGKARLAALAAETNRPKILSAPLTVIIGH
DFGFPDLMPRLFPARGDMLRNMFSEPHMAEITATRNGTLQGGYLIMAARALGLDCGPMSGFDNAAVDQEFFADTGIRSNF
ICCLGYGKPDTPFPRNPRLIFEEAGRWA

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=162, Percent_Identity=47.5308641975309, Blast_Score=148, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 20619; Mature: 20619

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSRLPSASLTSCFGSREPTTSIHERYELLKWGPTSANSCPARFVWVKSDAGKARLAAL
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHH
AAETNRPKILSAPLTVIIGHDFGFPDLMPRLFPARGDMLRNMFSEPHMAEITATRNGTLQ
HHCCCCCEEEECCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCC
GGYLIMAARALGLDCGPMSGFDNAAVDQEFFADTGIRSNFICCLGYGKPDTPFPRNPRLI
CCEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEE
FEEAGRWA
EECCCCCC
>Mature Secondary Structure
MMKSRLPSASLTSCFGSREPTTSIHERYELLKWGPTSANSCPARFVWVKSDAGKARLAAL
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHH
AAETNRPKILSAPLTVIIGHDFGFPDLMPRLFPARGDMLRNMFSEPHMAEITATRNGTLQ
HHCCCCCEEEECCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCC
GGYLIMAARALGLDCGPMSGFDNAAVDQEFFADTGIRSNFICCLGYGKPDTPFPRNPRLI
CCEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEE
FEEAGRWA
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA