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The map label for this gene is allS [H]

Identifier: 73540832

GI number: 73540832

Start: 1225280

End: 1226188

Strand: Reverse

Name: allS [H]

Synonym: Reut_A1130

Alternate gene names: 73540832

Gene position: 1226188-1225280 (Counterclockwise)

Preceding gene: 73540838

Following gene: 73540829

Centisome position: 32.21

GC content: 60.84

Gene sequence:

>909_bases
ATGCTGGACACCGTCACCATCAACCAGCTTCGTACCTTTATCGCCGTATGTGAGGAGAAGAGCTTCACGGGCGCGGCGCG
CCGGCTTCGGCGGGCCCAATCCGCGGTGAGCCACGCGATCTCCGCTTTGGAAGCTGCGCTAGGCGTCGAGCTTTTCGAGC
GAGACACCCGAAGGGCCGAACTTACCGCTGCTGGACGCAGCCTTATCCCCGATGCCCGAGCCGTCATTACACGAACGGAA
GACATGAAGAACCGGGCGAAGTCGATTTCCGCAGAAGGCGTGCCGCGGCTCTCGATCGCCGTCGACACCTATTTCCCGAG
GAAGCGCCTGATCGACTGCCTGCGTGTGCTCGAAGCCGAATCGCCGACGGCTGCCATCAACCTCCACATGACAACCATGC
AGGGTGGTGAGGCGTTGGTATTAGCAAGTGACTGCTCGCTTGCAGTCACCATTTCTGACGTGCCGGAGATCAAGAAAAGC
GCTATCGAGCGACACTGGCTCTGCGAAACGCCGCTTGTCACCGTTTGTGCGCCGACCCATCCGTTAGCCGGTATCAGCCG
ACCAATCGCCCAGGATGAATTTGGCGAATATGTGCAGTTGGTGGTCACCGACAACCAGCCGAGCGCAGAGACGAGCCAGA
AGGGAGTGGCAGGCGAGCGCCAATGGCTCGTCAACGACCTCGGGGCAAAACGTGACCTCTTGCTAGCGGGGCTTAGCTGG
GGGCACATGCCTGCGGATCTAGTCGCTGAAGATCTGGCTCAGGGGCGTCTTGTCGAAATCCGTCGCCGGGCATGGCACAT
CGGCCCCCTGGTGTTTGTCATCTCGCGCATCAGGGGAAGCGAGCTCTCATCATTCGAAGAGCGGGCGGTGCAGCTCCTGG
CGGGTGAACCGATCGCGGCTCCTATGTAA

Upstream 100 bases:

>100_bases
CCGTTCACGGTAATTTTGGGGGTGGTAAGAAAGATAAGAGACTTGACTCATCCGCAAAAGTGACTAAATTTTGATCTTTC
CCATCTAACGATTAGATGAC

Downstream 100 bases:

>100_bases
AGCTTCGTCGCAAGTCATGGTTGTTGCATAGTCGTCGAGATATTCGAACGATTGCGGGATCTCAGCGAGCTATCCGTGCA
CCGATGCCGAGGCCGACAAC

Product: regulatory protein, LysR:LysR, substrate-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLDTVTINQLRTFIAVCEEKSFTGAARRLRRAQSAVSHAISALEAALGVELFERDTRRAELTAAGRSLIPDARAVITRTE
DMKNRAKSISAEGVPRLSIAVDTYFPRKRLIDCLRVLEAESPTAAINLHMTTMQGGEALVLASDCSLAVTISDVPEIKKS
AIERHWLCETPLVTVCAPTHPLAGISRPIAQDEFGEYVQLVVTDNQPSAETSQKGVAGERQWLVNDLGAKRDLLLAGLSW
GHMPADLVAEDLAQGRLVEIRRRAWHIGPLVFVISRIRGSELSSFEERAVQLLAGEPIAAPM

Sequences:

>Translated_302_residues
MLDTVTINQLRTFIAVCEEKSFTGAARRLRRAQSAVSHAISALEAALGVELFERDTRRAELTAAGRSLIPDARAVITRTE
DMKNRAKSISAEGVPRLSIAVDTYFPRKRLIDCLRVLEAESPTAAINLHMTTMQGGEALVLASDCSLAVTISDVPEIKKS
AIERHWLCETPLVTVCAPTHPLAGISRPIAQDEFGEYVQLVVTDNQPSAETSQKGVAGERQWLVNDLGAKRDLLLAGLSW
GHMPADLVAEDLAQGRLVEIRRRAWHIGPLVFVISRIRGSELSSFEERAVQLLAGEPIAAPM
>Mature_302_residues
MLDTVTINQLRTFIAVCEEKSFTGAARRLRRAQSAVSHAISALEAALGVELFERDTRRAELTAAGRSLIPDARAVITRTE
DMKNRAKSISAEGVPRLSIAVDTYFPRKRLIDCLRVLEAESPTAAINLHMTTMQGGEALVLASDCSLAVTISDVPEIKKS
AIERHWLCETPLVTVCAPTHPLAGISRPIAQDEFGEYVQLVVTDNQPSAETSQKGVAGERQWLVNDLGAKRDLLLAGLSW
GHMPADLVAEDLAQGRLVEIRRRAWHIGPLVFVISRIRGSELSSFEERAVQLLAGEPIAAPM

Specific function: Positive regulator essential for the expression of allD operon. Binds to the allD promoter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786713, Length=265, Percent_Identity=30.188679245283, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786508, Length=264, Percent_Identity=28.4090909090909, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87082024, Length=255, Percent_Identity=25.0980392156863, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789492, Length=255, Percent_Identity=27.0588235294118, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787879, Length=185, Percent_Identity=28.1081081081081, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788887, Length=178, Percent_Identity=32.5842696629214, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI145693105, Length=182, Percent_Identity=26.3736263736264, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32964; Mature: 32964

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTVTINQLRTFIAVCEEKSFTGAARRLRRAQSAVSHAISALEAALGVELFERDTRRAE
CCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LTAAGRSLIPDARAVITRTEDMKNRAKSISAEGVPRLSIAVDTYFPRKRLIDCLRVLEAE
HHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
SPTAAINLHMTTMQGGEALVLASDCSLAVTISDVPEIKKSAIERHWLCETPLVTVCAPTH
CCCEEEEEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCC
PLAGISRPIAQDEFGEYVQLVVTDNQPSAETSQKGVAGERQWLVNDLGAKRDLLLAGLSW
CCCCCCCCCCHHHHCCEEEEEEECCCCCCCHHHCCCCCHHHHHHHHHCCCHHHEEECCCC
GHMPADLVAEDLAQGRLVEIRRRAWHIGPLVFVISRIRGSELSSFEERAVQLLAGEPIAA
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
PM
CC
>Mature Secondary Structure
MLDTVTINQLRTFIAVCEEKSFTGAARRLRRAQSAVSHAISALEAALGVELFERDTRRAE
CCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LTAAGRSLIPDARAVITRTEDMKNRAKSISAEGVPRLSIAVDTYFPRKRLIDCLRVLEAE
HHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
SPTAAINLHMTTMQGGEALVLASDCSLAVTISDVPEIKKSAIERHWLCETPLVTVCAPTH
CCCEEEEEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCC
PLAGISRPIAQDEFGEYVQLVVTDNQPSAETSQKGVAGERQWLVNDLGAKRDLLLAGLSW
CCCCCCCCCCHHHHCCEEEEEEECCCCCCCHHHCCCCCHHHHHHHHHCCCHHHEEECCCC
GHMPADLVAEDLAQGRLVEIRRRAWHIGPLVFVISRIRGSELSSFEERAVQLLAGEPIAA
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
PM
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA