Definition Ralstonia eutropha JMP134 chromosome 1, complete sequence.
Accession NC_007347
Length 3,806,533

Click here to switch to the map view.

The map label for this gene is ydcH [H]

Identifier: 73540816

GI number: 73540816

Start: 1207714

End: 1207929

Strand: Reverse

Name: ydcH [H]

Synonym: Reut_A1114

Alternate gene names: 73540816

Gene position: 1207929-1207714 (Counterclockwise)

Preceding gene: 73540817

Following gene: 73540815

Centisome position: 31.73

GC content: 55.56

Gene sequence:

>216_bases
ATGTTCCCTGAATACCGCGACCAGATTTCCCTGCTGAAGACGCAGGACGCTCATTTCGCACGGCTGTTCGATCGCCACAA
CCAGCTGGACCAGGAAATCCACAATATGGAAGCCGGCATCCTGCACGGCACCACCATGGAGATCGAGCGCCTCAAGAAGG
AAAAGCTTCAGCTCAAGGACCAGCTCTACGCCATCCTGCGCAATACACAGGCTTGA

Upstream 100 bases:

>100_bases
GCCGCCCGCGACGTCGGGCCGCGATGATCCACGTCAAGGTCGCTGCAGCCGTGCTTGCTCAGAATGGGAATGCCATAGCA
CATTTCTGAGGAGGCCCCGC

Downstream 100 bases:

>100_bases
TCATGGCAGGAACCAACCATGACACCAGCGCGGCTGACGCAGTCCGCGCCACCGCACGCGGCGACGTGCTGCCCACCAAT
ACGACCCGCTCGGCCGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MFPEYRDQISLLKTQDAHFARLFDRHNQLDQEIHNMEAGILHGTTMEIERLKKEKLQLKDQLYAILRNTQA

Sequences:

>Translated_71_residues
MFPEYRDQISLLKTQDAHFARLFDRHNQLDQEIHNMEAGILHGTTMEIERLKKEKLQLKDQLYAILRNTQA
>Mature_71_residues
MFPEYRDQISLLKTQDAHFARLFDRHNQLDQEIHNMEAGILHGTTMEIERLKKEKLQLKDQLYAILRNTQA

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081906, Length=66, Percent_Identity=53.030303030303, Blast_Score=72, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007420 [H]

Pfam domain/function: PF04325 DUF465 [H]

EC number: NA

Molecular weight: Translated: 8495; Mature: 8495

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPEYRDQISLLKTQDAHFARLFDRHNQLDQEIHNMEAGILHGTTMEIERLKKEKLQLKD
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QLYAILRNTQA
HHHHHHHHCCC
>Mature Secondary Structure
MFPEYRDQISLLKTQDAHFARLFDRHNQLDQEIHNMEAGILHGTTMEIERLKKEKLQLKD
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QLYAILRNTQA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2671655; 9097039; 9278503; 7567469 [H]