| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is trxB [C]
Identifier: 73540801
GI number: 73540801
Start: 1192539
End: 1193627
Strand: Reverse
Name: trxB [C]
Synonym: Reut_A1099
Alternate gene names: 73540801
Gene position: 1193627-1192539 (Counterclockwise)
Preceding gene: 73540809
Following gene: 73540799
Centisome position: 31.36
GC content: 67.13
Gene sequence:
>1089_bases ATGTCCACCGACAACACCACTGCCCTGCCCGGCGCCGCCGACACCACTACCACCGACGTGCTGATCGTCGGCGCGGGCCC GGTGGGCCTGTTCGCCGCGTTCCAGGCCGGCGTGCTCGGCCTGAAATGCGAGTTGATCGACGTCCTCGATCGCGCCGGCG GCCAATGCACGGAGCTATACCCCGAGAAGCCCATCTACGATATCCCGGCCGTACCAGGCTGCCTGGCCCAGGACCTGGTG GACCGCCTGCTGGAACAGTGCGCGCCGTTTGCCTTTCCGATGCACTTCAACCAGCGCGCCGAAAGCGTGGCAGAGGTGCT GCCCGCGCAGGACGGCGTCCATTCGCGCCTCCTGGTAACGACCGACAGCGGCAAGCGCTTCGACGTGGCCGCCGTGCTGG TCTGTGCCGGCGCCGGCGCGTTCGCGCCCCAGCGTGTATCGCTGCCTGAAGCACCCGGGCTAGAAGGCCGCCATGTGCAC TATGCAGTGCGCGACGTATCGCGGTTTGCAGGCAAGCGCGTGGTAGTCGCAGGCGGCGGCGACTCCGCCCTCGACTGGGC GCTGGCGCTGCGCAAGGTCGCCGCGCGCGTGACGCTGCTGCACCGGCGCGAAGGTTTCCGTGCGGCCGATGGCAGCGTGG CCGAAATGCGCGCGGCCGTGGAAGCCGGCGAAATGGACTTCGTCATCGGCATGCTCGGTGCACTCAAGACCTCCGGCGAA GGCGAGCATGCGGCACTCATGGAGATCGAAATCCGCAGCCGCGACGGCGTGCAGACCCTCGCCGCTGACGAACTAGTGGC GCTCTACGGACTGGTGTCGGAGCCGGGCCCGATCGCTCAATGGGACATGGACATGCGCGCCGGCCGCATCCTGGTGGACA CCACGACGTACGAAAGCTCGCGGCGTGGCATCTTCGCTGCCGGTGACATCGCCTATTACGCCAACAAGCAGAAGCTGATC CTTTCAGGCTTCCACGAAGCGGCGCTGGCGCTGCGCAAGGCCTATCACTACGCGTTCCCGCAGAAGTCGCTGGTGCACGT GCACACCAGCAACAACGCGGCGCTCAAGGAAAAGCTCACGCACGCCTGA
Upstream 100 bases:
>100_bases TGCCCCCCACACAAAGCCCTTGCCGGCAACGCTGGCGTCGGGAGAATGGCGCCTTCCGCGCGGTATAGTCGGGTTTTGGA ATCCCTGTGCCGCACCGCCA
Downstream 100 bases:
>100_bases GGCACGCGGCCCGCGTCAGGCAATGAACGATTCGATCAGCGCCGCCACCGCGGCGGGCTGGTCGTGGTGCAGCATGTGGC CCGCGTCGTCGATCACGACC
Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase:aromatic-ring hydroxylase
Products: NA
Alternate protein names: FNR 1; Fd-NADP+ reductase 1
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSTDNTTALPGAADTTTTDVLIVGAGPVGLFAAFQAGVLGLKCELIDVLDRAGGQCTELYPEKPIYDIPAVPGCLAQDLV DRLLEQCAPFAFPMHFNQRAESVAEVLPAQDGVHSRLLVTTDSGKRFDVAAVLVCAGAGAFAPQRVSLPEAPGLEGRHVH YAVRDVSRFAGKRVVVAGGGDSALDWALALRKVAARVTLLHRREGFRAADGSVAEMRAAVEAGEMDFVIGMLGALKTSGE GEHAALMEIEIRSRDGVQTLAADELVALYGLVSEPGPIAQWDMDMRAGRILVDTTTYESSRRGIFAAGDIAYYANKQKLI LSGFHEAALALRKAYHYAFPQKSLVHVHTSNNAALKEKLTHA
Sequences:
>Translated_362_residues MSTDNTTALPGAADTTTTDVLIVGAGPVGLFAAFQAGVLGLKCELIDVLDRAGGQCTELYPEKPIYDIPAVPGCLAQDLV DRLLEQCAPFAFPMHFNQRAESVAEVLPAQDGVHSRLLVTTDSGKRFDVAAVLVCAGAGAFAPQRVSLPEAPGLEGRHVH YAVRDVSRFAGKRVVVAGGGDSALDWALALRKVAARVTLLHRREGFRAADGSVAEMRAAVEAGEMDFVIGMLGALKTSGE GEHAALMEIEIRSRDGVQTLAADELVALYGLVSEPGPIAQWDMDMRAGRILVDTTTYESSRRGIFAAGDIAYYANKQKLI LSGFHEAALALRKAYHYAFPQKSLVHVHTSNNAALKEKLTHA >Mature_361_residues STDNTTALPGAADTTTTDVLIVGAGPVGLFAAFQAGVLGLKCELIDVLDRAGGQCTELYPEKPIYDIPAVPGCLAQDLVD RLLEQCAPFAFPMHFNQRAESVAEVLPAQDGVHSRLLVTTDSGKRFDVAAVLVCAGAGAFAPQRVSLPEAPGLEGRHVHY AVRDVSRFAGKRVVVAGGGDSALDWALALRKVAARVTLLHRREGFRAADGSVAEMRAAVEAGEMDFVIGMLGALKTSGEG EHAALMEIEIRSRDGVQTLAADELVALYGLVSEPGPIAQWDMDMRAGRILVDTTTYESSRRGIFAAGDIAYYANKQKLIL SGFHEAALALRKAYHYAFPQKSLVHVHTSNNAALKEKLTHA
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferredoxin--NADP reductase type 2 family
Homologues:
Organism=Escherichia coli, GI1787114, Length=319, Percent_Identity=24.7648902821317, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): FENR1_CUPPJ (Q473F6)
Other databases:
- EMBL: CP000090 - RefSeq: YP_295321.1 - ProteinModelPortal: Q473F6 - GeneID: 3611453 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A1099 - NMPDR: fig|264198.3.peg.1601 - HOGENOM: HBG669726 - OMA: YPNKQKL - ProtClustDB: CLSK896839 - BioCyc: REUT264198:REUT_A1099-MONOMER - HAMAP: MF_01685 - InterPro: IPR013027 - InterPro: IPR022890 - InterPro: IPR001327 - InterPro: IPR000103 - PRINTS: PR00368 - PRINTS: PR00469
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2
EC number: =1.18.1.2
Molecular weight: Translated: 38563; Mature: 38432
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: BINDING 47-47 BINDING 55-55 BINDING 60-60 BINDING 100-100 BINDING 141-141 BINDING 309-309 BINDING 350-350
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDNTTALPGAADTTTTDVLIVGAGPVGLFAAFQAGVLGLKCELIDVLDRAGGQCTELY CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCHHEEHHHHHHHHHHCCCCEEECC PEKPIYDIPAVPGCLAQDLVDRLLEQCAPFAFPMHFNQRAESVAEVLPAQDGVHSRLLVT CCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCCCCCCCEEEEE TDSGKRFDVAAVLVCAGAGAFAPQRVSLPEAPGLEGRHVHYAVRDVSRFAGKRVVVAGGG ECCCCEEHHHHEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEECCC DSALDWALALRKVAARVTLLHRREGFRAADGSVAEMRAAVEAGEMDFVIGMLGALKTSGE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC GEHAALMEIEIRSRDGVQTLAADELVALYGLVSEPGPIAQWDMDMRAGRILVDTTTYESS CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEECCCCCC RRGIFAAGDIAYYANKQKLILSGFHEAALALRKAYHYAFPQKSLVHVHTSNNAALKEKLT CCCEEEECCEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHC HA CC >Mature Secondary Structure STDNTTALPGAADTTTTDVLIVGAGPVGLFAAFQAGVLGLKCELIDVLDRAGGQCTELY CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCHHEEHHHHHHHHHHCCCCEEECC PEKPIYDIPAVPGCLAQDLVDRLLEQCAPFAFPMHFNQRAESVAEVLPAQDGVHSRLLVT CCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCCCCCCCEEEEE TDSGKRFDVAAVLVCAGAGAFAPQRVSLPEAPGLEGRHVHYAVRDVSRFAGKRVVVAGGG ECCCCEEHHHHEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEECCC DSALDWALALRKVAARVTLLHRREGFRAADGSVAEMRAAVEAGEMDFVIGMLGALKTSGE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC GEHAALMEIEIRSRDGVQTLAADELVALYGLVSEPGPIAQWDMDMRAGRILVDTTTYESS CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEECCCCCC RRGIFAAGDIAYYANKQKLILSGFHEAALALRKAYHYAFPQKSLVHVHTSNNAALKEKLT CCCEEEECCEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHC HA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA