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The map label for this gene is yrdA [C]

Identifier: 73540797

GI number: 73540797

Start: 1188246

End: 1188770

Strand: Reverse

Name: yrdA [C]

Synonym: Reut_A1095

Alternate gene names: 73540797

Gene position: 1188770-1188246 (Counterclockwise)

Preceding gene: 73540799

Following gene: 73540796

Centisome position: 31.23

GC content: 64.95

Gene sequence:

>525_bases
ATGGCGCTGTACCAGCTCGGCGAACTCGTTCCCAATATCGACCAGGACGCCTATGTGGCGCCCGAAGCCACCATCATCGG
CAACGTGACCATGAAGTCGCGCGCCAGTGCATGGCCCGGCGTCGTCATCCGGGGCGACAACGAACCGATCGTGGTCGGCG
TGGACACCAACATCCAGGAAGGCTCCGTGCTCCACGTCGATCCGGGCTGCCCGTTGACGCTGGGCGACAAGGTTTCCATC
GGCCACCAGGCCATGCTGCACGGCTGCACCGTTGGAGAAGGCTCGCTGATCGGCATCCAGGCCGTGGTGCTGAACCGCGC
CGTGATCGGCAAGGAATGCCTCGTCGGCGCGGGCGCCGTGGTGACCGAAGGCAAGGTATTCCCCGACCGCTCGCTGATCC
TTGGTGCGCCGGCGAAGGTGGTGCGCGAACTGACCGACCAGGACGTGGCCAACCTGTACCGCAATGCCGAGACCTACGCC
ACGCGCCAGGCCATGTACAAGCAACAGCTCAAGCGGATCGACTGA

Upstream 100 bases:

>100_bases
GGGTGCTGCCGACCCACGCGGCAATACCCCAGCAGCAAACCCGGTGCTCTTTAAAGACTGGCGGCAATCCCCAGATAACT
ACCTTCGTGCAGGAGATTCC

Downstream 100 bases:

>100_bases
CACGCGCCGCAGCAGCTACAACCGATTGACAGACAGACTATTGTGACCGATACGACCACTACCGACACCCTGCAAAAGTT
CCTGTTCGACGCGGCCCCCG

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MALYQLGELVPNIDQDAYVAPEATIIGNVTMKSRASAWPGVVIRGDNEPIVVGVDTNIQEGSVLHVDPGCPLTLGDKVSI
GHQAMLHGCTVGEGSLIGIQAVVLNRAVIGKECLVGAGAVVTEGKVFPDRSLILGAPAKVVRELTDQDVANLYRNAETYA
TRQAMYKQQLKRID

Sequences:

>Translated_174_residues
MALYQLGELVPNIDQDAYVAPEATIIGNVTMKSRASAWPGVVIRGDNEPIVVGVDTNIQEGSVLHVDPGCPLTLGDKVSI
GHQAMLHGCTVGEGSLIGIQAVVLNRAVIGKECLVGAGAVVTEGKVFPDRSLILGAPAKVVRELTDQDVANLYRNAETYA
TRQAMYKQQLKRID
>Mature_173_residues
ALYQLGELVPNIDQDAYVAPEATIIGNVTMKSRASAWPGVVIRGDNEPIVVGVDTNIQEGSVLHVDPGCPLTLGDKVSIG
HQAMLHGCTVGEGSLIGIQAVVLNRAVIGKECLVGAGAVVTEGKVFPDRSLILGAPAKVVRELTDQDVANLYRNAETYAT
RQAMYKQQLKRID

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=169, Percent_Identity=37.8698224852071, Blast_Score=124, Evalue=2e-30,
Organism=Escherichia coli, GI1787667, Length=174, Percent_Identity=36.2068965517241, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI87081681, Length=159, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18506; Mature: 18374

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYQLGELVPNIDQDAYVAPEATIIGNVTMKSRASAWPGVVIRGDNEPIVVGVDTNIQE
CCHHHHHHHCCCCCCCCEECCCEEEEECEEECCCCCCCCCEEEECCCCCEEEEECCCCCC
GSVLHVDPGCPLTLGDKVSIGHQAMLHGCTVGEGSLIGIQAVVLNRAVIGKECLVGAGAV
CCEEEECCCCCEEECCCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHCHHHHCCCCCE
VTEGKVFPDRSLILGAPAKVVRELTDQDVANLYRNAETYATRQAMYKQQLKRID
EECCEECCCCCEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALYQLGELVPNIDQDAYVAPEATIIGNVTMKSRASAWPGVVIRGDNEPIVVGVDTNIQE
CHHHHHHHCCCCCCCCEECCCEEEEECEEECCCCCCCCCEEEECCCCCEEEEECCCCCC
GSVLHVDPGCPLTLGDKVSIGHQAMLHGCTVGEGSLIGIQAVVLNRAVIGKECLVGAGAV
CCEEEECCCCCEEECCCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHCHHHHCCCCCE
VTEGKVFPDRSLILGAPAKVVRELTDQDVANLYRNAETYATRQAMYKQQLKRID
EECCEECCCCCEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]