| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540785
Identifier: 73540785
GI number: 73540785
Start: 1176416
End: 1177888
Strand: Direct
Name: 73540785
Synonym: Reut_A1083
Alternate gene names: NA
Gene position: 1176416-1177888 (Clockwise)
Preceding gene: 73540784
Following gene: 73540786
Centisome position: 30.91
GC content: 66.12
Gene sequence:
>1473_bases ATGGCGGCGCGCTTTTTCGACGAGATGCTGGATTGGCGGGATGGCGATACCCCGGTCATCCAGGCGGGGCAGGCATTGCC GGGCGGTGTGGTACGGCCGCACTACCGGCACTTCACGGACTGGCTGGCGCGGCAGTCCGAGAACACGATGGCCAACAAGC GCGCCGAGGCGGACCTGATCTTCCGGCGCGTGGGCATCACCTTCGCGGTCTACGGCGACAAGGACGAATCCAACAGCGGC ACCGAGCGGACCATTCCGTTCGATGTGATTCCGCGCATCTTTCCCGCCAGCGAGTGGGCCACGCTGGAAAAGGGCCTGCG CCAGCGTGTGGCGGCGTTGAACCGCTTCATCCACGACATCTACCACGGGCAGGACATCATCCGCGCGGGCGTGATTCCGC CGGACCAGATCTACAACAACGCCCAGTACCGTCCCGAGATGCTTGGCGTCGACGTGCCGCGCGACATTTACGCGCACGTG GCCGGCATCGACGTGGTGCGCGCCGGCGAGGGCGAGTTCTACGTGCTGGAGGACAACCTGCGCGTGCCGTCGGGCGTGTC GTACATGCTCGAGAACCGCAAGATGATGATGCGCTTGTTCCCGGACCTGTTCGCGCGCAATCGCGTCGCGCCCGTGGCCC ACTATCCCGACCTGCTGCTCGACATGCTGCGCGGCGTCTCGCCGCAGGCCATCAGCGATCCGACCGTGGTGGTGCTGACC CCGGGGATGTACAACTCCGCGTACTTCGAGCATGCGTTCCTCGCACAGCAGATGGGCGTGGAACTCGTGGAGGGCAGCGA CCTGTTCGTCGAGGACGATCACCTGTTCATGCGTACCACGCAGGGCCCGCAGCGCATCGACGTGATCTACCGGCGCGTGG ATGACGACTTCCTCGACCCACTCGTGTTCCGGCCTGATTCCGCGCTGGGCGCGGCCGGTCTGCTGTCGGTCTATCGCGCG GGCAACGTGACCATCTCCAACGCCATTGGCACGGGCGTGGCTGACGACAAGTCGATCTACCCGTACGTGCCCGACATGAT CCGCTTCTATCTCGGCGAAGAGGCCATCCTCAACAACGTGCCGACCTATATGTGCCGGCGCCCGGACGACCTGCAGTACG TGCTCGACAACATGGCGGACCTGGTGGTGAAGGAAACGCACGGCGCGGGCGGCTACGGCATGCTGGTGGGGCCGGCGGCA ACGCGCGCGGAGATCGATACCTTCCGCGAGGTCGTGAAGTCGCGGCCCGAGCAGTACATCGCGCAGCCGACGCTGGCGTT GTCGACGTGTCCGACGTATGTGGAATCGGGCATCGCGCCGCGCCATATCGACCTGCGTCCGTTCGTGCTGTCGGGGCGCG AGGTGCGCATGGTGCCGGGCGGCCTCACGCGCGTAGCGCTGCGCGAAGGCTCGCTCGTGGTGAATTCCTCGCAGGGCGGG GGGACCAAGGACACGTGGGTGCTGGAGCGCTGA
Upstream 100 bases:
>100_bases AGCTGTACAGCCAGGAAAAACAAGGGGGCGGCGGTTCCGGTGGGAGGCCGGGAGGCCAGGCGACCAGGACGTCCCCCATT TCACGGAGGGAAGGGCCATC
Downstream 100 bases:
>100_bases ACGCGCCCGCCGCCAGCACCGCATTGCGAGGAGAACCAACATGCTGAGCCGCACCGCCGACCATCTGTTCTGGATGGCGC GCTATACCGAACGCGCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MAARFFDEMLDWRDGDTPVIQAGQALPGGVVRPHYRHFTDWLARQSENTMANKRAEADLIFRRVGITFAVYGDKDESNSG TERTIPFDVIPRIFPASEWATLEKGLRQRVAALNRFIHDIYHGQDIIRAGVIPPDQIYNNAQYRPEMLGVDVPRDIYAHV AGIDVVRAGEGEFYVLEDNLRVPSGVSYMLENRKMMMRLFPDLFARNRVAPVAHYPDLLLDMLRGVSPQAISDPTVVVLT PGMYNSAYFEHAFLAQQMGVELVEGSDLFVEDDHLFMRTTQGPQRIDVIYRRVDDDFLDPLVFRPDSALGAAGLLSVYRA GNVTISNAIGTGVADDKSIYPYVPDMIRFYLGEEAILNNVPTYMCRRPDDLQYVLDNMADLVVKETHGAGGYGMLVGPAA TRAEIDTFREVVKSRPEQYIAQPTLALSTCPTYVESGIAPRHIDLRPFVLSGREVRMVPGGLTRVALREGSLVVNSSQGG GTKDTWVLER
Sequences:
>Translated_490_residues MAARFFDEMLDWRDGDTPVIQAGQALPGGVVRPHYRHFTDWLARQSENTMANKRAEADLIFRRVGITFAVYGDKDESNSG TERTIPFDVIPRIFPASEWATLEKGLRQRVAALNRFIHDIYHGQDIIRAGVIPPDQIYNNAQYRPEMLGVDVPRDIYAHV AGIDVVRAGEGEFYVLEDNLRVPSGVSYMLENRKMMMRLFPDLFARNRVAPVAHYPDLLLDMLRGVSPQAISDPTVVVLT PGMYNSAYFEHAFLAQQMGVELVEGSDLFVEDDHLFMRTTQGPQRIDVIYRRVDDDFLDPLVFRPDSALGAAGLLSVYRA GNVTISNAIGTGVADDKSIYPYVPDMIRFYLGEEAILNNVPTYMCRRPDDLQYVLDNMADLVVKETHGAGGYGMLVGPAA TRAEIDTFREVVKSRPEQYIAQPTLALSTCPTYVESGIAPRHIDLRPFVLSGREVRMVPGGLTRVALREGSLVVNSSQGG GTKDTWVLER >Mature_489_residues AARFFDEMLDWRDGDTPVIQAGQALPGGVVRPHYRHFTDWLARQSENTMANKRAEADLIFRRVGITFAVYGDKDESNSGT ERTIPFDVIPRIFPASEWATLEKGLRQRVAALNRFIHDIYHGQDIIRAGVIPPDQIYNNAQYRPEMLGVDVPRDIYAHVA GIDVVRAGEGEFYVLEDNLRVPSGVSYMLENRKMMMRLFPDLFARNRVAPVAHYPDLLLDMLRGVSPQAISDPTVVVLTP GMYNSAYFEHAFLAQQMGVELVEGSDLFVEDDHLFMRTTQGPQRIDVIYRRVDDDFLDPLVFRPDSALGAAGLLSVYRAG NVTISNAIGTGVADDKSIYPYVPDMIRFYLGEEAILNNVPTYMCRRPDDLQYVLDNMADLVVKETHGAGGYGMLVGPAAT RAEIDTFREVVKSRPEQYIAQPTLALSTCPTYVESGIAPRHIDLRPFVLSGREVRMVPGGLTRVALREGSLVVNSSQGGG TKDTWVLER
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 54793; Mature: 54662
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARFFDEMLDWRDGDTPVIQAGQALPGGVVRPHYRHFTDWLARQSENTMANKRAEADLI CCHHHHHHHHCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH FRRVGITFAVYGDKDESNSGTERTIPFDVIPRIFPASEWATLEKGLRQRVAALNRFIHDI HHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH YHGQDIIRAGVIPPDQIYNNAQYRPEMLGVDVPRDIYAHVAGIDVVRAGEGEFYVLEDNL HCCCHHHHCCCCCHHHHHCCCCCCCHHCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCC RVPSGVSYMLENRKMMMRLFPDLFARNRVAPVAHYPDLLLDMLRGVSPQAISDPTVVVLT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHCCCCCCCCCCEEEEEC PGMYNSAYFEHAFLAQQMGVELVEGSDLFVEDDHLFMRTTQGPQRIDVIYRRVDDDFLDP CCCCCHHHHHHHHHHHHHCCEEECCCCEEEECCCEEEEECCCCHHHHHHHHHHCHHHHCC LVFRPDSALGAAGLLSVYRAGNVTISNAIGTGVADDKSIYPYVPDMIRFYLGEEAILNNV EEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCC PTYMCRRPDDLQYVLDNMADLVVKETHGAGGYGMLVGPAATRAEIDTFREVVKSRPEQYI CHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHH AQPTLALSTCPTYVESGIAPRHIDLRPFVLSGREVRMVPGGLTRVALREGSLVVNSSQGG HCCCHHHHHCHHHHHCCCCCCEECCCEEEECCCEEEECCCCCEEEEEECCCEEEECCCCC GTKDTWVLER CCCCCEEECC >Mature Secondary Structure AARFFDEMLDWRDGDTPVIQAGQALPGGVVRPHYRHFTDWLARQSENTMANKRAEADLI CHHHHHHHHCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH FRRVGITFAVYGDKDESNSGTERTIPFDVIPRIFPASEWATLEKGLRQRVAALNRFIHDI HHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH YHGQDIIRAGVIPPDQIYNNAQYRPEMLGVDVPRDIYAHVAGIDVVRAGEGEFYVLEDNL HCCCHHHHCCCCCHHHHHCCCCCCCHHCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCC RVPSGVSYMLENRKMMMRLFPDLFARNRVAPVAHYPDLLLDMLRGVSPQAISDPTVVVLT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHCCCCCCCCCCEEEEEC PGMYNSAYFEHAFLAQQMGVELVEGSDLFVEDDHLFMRTTQGPQRIDVIYRRVDDDFLDP CCCCCHHHHHHHHHHHHHCCEEECCCCEEEECCCEEEEECCCCHHHHHHHHHHCHHHHCC LVFRPDSALGAAGLLSVYRAGNVTISNAIGTGVADDKSIYPYVPDMIRFYLGEEAILNNV EEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCC PTYMCRRPDDLQYVLDNMADLVVKETHGAGGYGMLVGPAATRAEIDTFREVVKSRPEQYI CHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHH AQPTLALSTCPTYVESGIAPRHIDLRPFVLSGREVRMVPGGLTRVALREGSLVVNSSQGG HCCCHHHHHCHHHHHCCCCCCEECCCEEEECCCEEEECCCCCEEEEEECCCEEEECCCCC GTKDTWVLER CCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]