| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is fdx [H]
Identifier: 73540766
GI number: 73540766
Start: 1155340
End: 1155678
Strand: Direct
Name: fdx [H]
Synonym: Reut_A1064
Alternate gene names: 73540766
Gene position: 1155340-1155678 (Clockwise)
Preceding gene: 73540765
Following gene: 73540767
Centisome position: 30.35
GC content: 61.65
Gene sequence:
>339_bases ATGCCACAGATCATCGTTTTGCCCCACGCCGAATACTGCCCGGAAGGGGCCGTGATCGAAGCCAAGACCGGCGTCAGCGT CTGCGACGCGCTGCTGGCCAACGACATCGACATCGAACACGCGTGCGAGAAGTCGTGCGCCTGCACGACCTGCCACGTGA TCGTGCGCGAGGGCTTTGACTCGCTCAACGAGGCCGAGGAAAAGGAAGAAGATCTGCTCGACAAGGCCTGGGGCCTCGAG CCCCATTCGCGCCTGTCGTGCCAGGCCATCGTCGCCGACGAGGATCTGACCGTCGAGATCCCGAAGTACACCATCAATCA CGCGAAAGAAGGCCACTAA
Upstream 100 bases:
>100_bases ATGGACCGCTCGATCAAGAGCGCGCTGGCCGGGCGCAAGGTGCAGGAACTCGGCTGATCACCGGCTCCCGTATCGCACAG CATCAATACCAGGACACGAC
Downstream 100 bases:
>100_bases GGCCCGGAGAATTCCATGAAGTGGACCGATACCTACGACATCGCCGCGGCGCTGTATGACAAGTTTCCCGACGTGGACCC CGTGACGATCCGCTTCACGG
Product: ferredoxin, 2Fe-2S type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPQIIVLPHAEYCPEGAVIEAKTGVSVCDALLANDIDIEHACEKSCACTTCHVIVREGFDSLNEAEEKEEDLLDKAWGLE PHSRLSCQAIVADEDLTVEIPKYTINHAKEGH
Sequences:
>Translated_112_residues MPQIIVLPHAEYCPEGAVIEAKTGVSVCDALLANDIDIEHACEKSCACTTCHVIVREGFDSLNEAEEKEEDLLDKAWGLE PHSRLSCQAIVADEDLTVEIPKYTINHAKEGH >Mature_111_residues PQIIVLPHAEYCPEGAVIEAKTGVSVCDALLANDIDIEHACEKSCACTTCHVIVREGFDSLNEAEEKEEDLLDKAWGLEP HSRLSCQAIVADEDLTVEIPKYTINHAKEGH
Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI72534754, Length=97, Percent_Identity=40.2061855670103, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=71.8181818181818, Blast_Score=171, Evalue=8e-45, Organism=Caenorhabditis elegans, GI17544202, Length=97, Percent_Identity=42.2680412371134, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6325004, Length=86, Percent_Identity=41.8604651162791, Blast_Score=67, Evalue=5e-13, Organism=Drosophila melanogaster, GI24661503, Length=97, Percent_Identity=43.298969072165, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001055 - InterPro: IPR018298 - InterPro: IPR012675 - InterPro: IPR011536 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2 [H]
EC number: NA
Molecular weight: Translated: 12286; Mature: 12155
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQIIVLPHAEYCPEGAVIEAKTGVSVCDALLANDIDIEHACEKSCACTTCHVIVREGFD CCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCH SLNEAEEKEEDLLDKAWGLEPHSRLSCQAIVADEDLTVEIPKYTINHAKEGH HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECCCEEECCCCCCC >Mature Secondary Structure PQIIVLPHAEYCPEGAVIEAKTGVSVCDALLANDIDIEHACEKSCACTTCHVIVREGFD CEEEEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCH SLNEAEEKEEDLLDKAWGLEPHSRLSCQAIVADEDLTVEIPKYTINHAKEGH HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: 2Fe-2S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809750; 10984043 [H]