| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540716
Identifier: 73540716
GI number: 73540716
Start: 1102143
End: 1102667
Strand: Reverse
Name: 73540716
Synonym: Reut_A1013
Alternate gene names: NA
Gene position: 1102667-1102143 (Counterclockwise)
Preceding gene: 73540719
Following gene: 73540715
Centisome position: 28.97
GC content: 67.05
Gene sequence:
>525_bases ATGACCAACCCGACATCCGGCGACGCTTCAGCGCCCCGCCTCGCCGGCATCACATCTGCCGCCAGTAACCCTCCGCGCGT TGTACTGGACTCCAATATCTGGGTCGACCTGCTGGTGTTCGGCGACCCGCACACCCGACCGATCCTTGAAGCGCTCGAAG CCGGCACCATCGCGCCGGTGATCCGCGCCGACTGCCGAGAAGAACTGCGCCGCGTGCTCGCCTATCCGCAATTTGCACGT TTTGCCGTCGATATCGACGCGGCACTGGCCACCGTGGACCGCTTCAGCACGTTGGAGCCGCTGCCCTCGCAGGAAGACGC CGACGCGATCCGCCTGCCGCGCTGCAAGGACACGGACGACCAGAAGTTCGTCGAGCTTGCGCACTTCTCGCGTGCCGCGT GCCTGGTGTCGAAGGACAAGGCCGTGCTCAAGCTCAGGAGCCGCTTGCGCCGCTCCAGCGGCGTGGAAGTGATGACACCG CCCGCGTTCGGCCAGTGGCTGGTTGCCCTGGCGGCCGCCGCCTGA
Upstream 100 bases:
>100_bases TCTTGGTGCGCGCGGGTGTCTCGTAGTCCAGGGACTTCGCGGGAGACAGGACGATGAGCATGGCAAAATTGCGGGAAACA CAAAGCCAAGATTGTAGCGA
Downstream 100 bases:
>100_bases TGCCTCGAATCGCTTTAGAATTGCCGCTGTTGCCGCTTCGGCAAGCCGATTTTCGCTCTCGTCCTACAACGTCGCAGCCA TGTCCGCAGACTCCACCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: PilT Protein Domain Protein; PIN Domain
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTNPTSGDASAPRLAGITSAASNPPRVVLDSNIWVDLLVFGDPHTRPILEALEAGTIAPVIRADCREELRRVLAYPQFAR FAVDIDAALATVDRFSTLEPLPSQEDADAIRLPRCKDTDDQKFVELAHFSRAACLVSKDKAVLKLRSRLRRSSGVEVMTP PAFGQWLVALAAAA
Sequences:
>Translated_174_residues MTNPTSGDASAPRLAGITSAASNPPRVVLDSNIWVDLLVFGDPHTRPILEALEAGTIAPVIRADCREELRRVLAYPQFAR FAVDIDAALATVDRFSTLEPLPSQEDADAIRLPRCKDTDDQKFVELAHFSRAACLVSKDKAVLKLRSRLRRSSGVEVMTP PAFGQWLVALAAAA >Mature_173_residues TNPTSGDASAPRLAGITSAASNPPRVVLDSNIWVDLLVFGDPHTRPILEALEAGTIAPVIRADCREELRRVLAYPQFARF AVDIDAALATVDRFSTLEPLPSQEDADAIRLPRCKDTDDQKFVELAHFSRAACLVSKDKAVLKLRSRLRRSSGVEVMTPP AFGQWLVALAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18878; Mature: 18747
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPTSGDASAPRLAGITSAASNPPRVVLDSNIWVDLLVFGDPHTRPILEALEAGTIAPV CCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCHH IRADCREELRRVLAYPQFARFAVDIDAALATVDRFSTLEPLPSQEDADAIRLPRCKDTDD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCH QKFVELAHFSRAACLVSKDKAVLKLRSRLRRSSGVEVMTPPAFGQWLVALAAAA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCC >Mature Secondary Structure TNPTSGDASAPRLAGITSAASNPPRVVLDSNIWVDLLVFGDPHTRPILEALEAGTIAPV CCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCHH IRADCREELRRVLAYPQFARFAVDIDAALATVDRFSTLEPLPSQEDADAIRLPRCKDTDD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCH QKFVELAHFSRAACLVSKDKAVLKLRSRLRRSSGVEVMTPPAFGQWLVALAAAA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA