| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is yhiN [H]
Identifier: 73540588
GI number: 73540588
Start: 963146
End: 964396
Strand: Direct
Name: yhiN [H]
Synonym: Reut_A0885
Alternate gene names: 73540588
Gene position: 963146-964396 (Clockwise)
Preceding gene: 73540586
Following gene: 73540589
Centisome position: 25.3
GC content: 68.35
Gene sequence:
>1251_bases ATGAGTGGTGTGGCGGGTCGGCAGGCGGGCCGGTATGACGTGGCCGTGCTGGGCGCGGGCGCGGCCGGCATGATGTGTGC CGCCGTGGCGGGCCAGGGCGGCGCGCGCGTGGTGTTGATCGACCATGCCACGAAACTGGCCGAGAAGATCCGCATCTCAG GCGGCGGCCGCTGCAATTTCACCAATCTGCAGGCAGGGCCGGCCAACTATCTGTCGTCCAATCCGCACTTTTGCCGCTCG GCGCTCGCCCGCTACACGCCTCAGCATTTCCTGGAGTTGATGCGGCGCCACCGTATCGACTGGCATGAAAAGCATCGGGG TCAGCTGTTCTGCAACGACAGTGCCGAAGACGTCATCGCCATGCTGCGCGCCGAGTGTGACGCGGGCCATGTGCACTGGC AGACCGGCTGCAGCATCGAGGAAGTCCGCCGCGAGGGCGACGACTACCTGCTGCTGACCTCTCAGGGCACCGTGCGCGCC AGGGCGCTGGTGGTGGCCACGGGCGGGCTTTCGATCCCGAAGATCGGCGCCACGGACTTCGGCTACCGCATTGCCCGCCA GTTCGGCCTGAAGATCATCGAGACCCGGCCGGCGCTGGTGCCGCTGACTTTCGACGGGCAGGCCTGGCAGCCGTTCGTGC CGCTGGCCGGGGTGTCGCTCGAAGTCGATATCTCGACCGGAGCCGGCAAGACGGCCGGCGCGTTTCGCGAAGACCTGCTG TGGACCCACCGCGGCCTGTCGGGCCCGGCCGTGCTGCAGATATCGAGCTTCTGGCGGCCCGGCACGCCCATCAAGATCGA CCTGTTCGATGGCGAGGACGCCGCCGGCTGGCTGCTCGAGCAGAAGGCCGGTAGCCGCAAGCACCTGGCCAACCTGCTAT CTCAGCGCTTGCCGGCGCGGCTGGCGGACGCGTGGTGTGCGGCGGCCGGCGTAGACGGCAGCCTGCCGCTGCATGACATT GCCGACAAGGCGCTGCGGCGGCTCGGGGCGTCGCTGAACGACTGGCAAGTCGTTCCTTCCGGCACGGAAGGCTACCGAAA GGCCGAAGTGACGATCGGCGGAGTGGACACGCGCGGGCTCTCTTCCACTACCATGATGGCGCGCGAGGTGGAGGGCCTGT ATTTCATCGGCGAGGTCGTCGACGTGACGGGATGGCTCGGCGGCTACAACTTCCAATGGGCGTGGGCTTCCGCGGTGGCA GCCGGACACGCGTTGGCCGAGGCCGCGCGCAACGGCCGCGCTGTCGCGTGA
Upstream 100 bases:
>100_bases GCGTGGAACCCAGCAGGTTAGCACACCGGCGCCCGGCGTGCTTTTCGCTACAATCTGCGCTTTCCCTGGACGGCAGGGTT CCCAATTAAAGAGGGTTGGA
Downstream 100 bases:
>100_bases ATGCGGCGCATCCAGCACGGTGCGCCGCCATCGACGGTGGGGGGCTTGGTGCTACAATCCTGACCTACCGCGCCCGCCTT TGCGCGCAGACCCGCTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSGVAGRQAGRYDVAVLGAGAAGMMCAAVAGQGGARVVLIDHATKLAEKIRISGGGRCNFTNLQAGPANYLSSNPHFCRS ALARYTPQHFLELMRRHRIDWHEKHRGQLFCNDSAEDVIAMLRAECDAGHVHWQTGCSIEEVRREGDDYLLLTSQGTVRA RALVVATGGLSIPKIGATDFGYRIARQFGLKIIETRPALVPLTFDGQAWQPFVPLAGVSLEVDISTGAGKTAGAFREDLL WTHRGLSGPAVLQISSFWRPGTPIKIDLFDGEDAAGWLLEQKAGSRKHLANLLSQRLPARLADAWCAAAGVDGSLPLHDI ADKALRRLGASLNDWQVVPSGTEGYRKAEVTIGGVDTRGLSSTTMMAREVEGLYFIGEVVDVTGWLGGYNFQWAWASAVA AGHALAEAARNGRAVA
Sequences:
>Translated_416_residues MSGVAGRQAGRYDVAVLGAGAAGMMCAAVAGQGGARVVLIDHATKLAEKIRISGGGRCNFTNLQAGPANYLSSNPHFCRS ALARYTPQHFLELMRRHRIDWHEKHRGQLFCNDSAEDVIAMLRAECDAGHVHWQTGCSIEEVRREGDDYLLLTSQGTVRA RALVVATGGLSIPKIGATDFGYRIARQFGLKIIETRPALVPLTFDGQAWQPFVPLAGVSLEVDISTGAGKTAGAFREDLL WTHRGLSGPAVLQISSFWRPGTPIKIDLFDGEDAAGWLLEQKAGSRKHLANLLSQRLPARLADAWCAAAGVDGSLPLHDI ADKALRRLGASLNDWQVVPSGTEGYRKAEVTIGGVDTRGLSSTTMMAREVEGLYFIGEVVDVTGWLGGYNFQWAWASAVA AGHALAEAARNGRAVA >Mature_415_residues SGVAGRQAGRYDVAVLGAGAAGMMCAAVAGQGGARVVLIDHATKLAEKIRISGGGRCNFTNLQAGPANYLSSNPHFCRSA LARYTPQHFLELMRRHRIDWHEKHRGQLFCNDSAEDVIAMLRAECDAGHVHWQTGCSIEEVRREGDDYLLLTSQGTVRAR ALVVATGGLSIPKIGATDFGYRIARQFGLKIIETRPALVPLTFDGQAWQPFVPLAGVSLEVDISTGAGKTAGAFREDLLW THRGLSGPAVLQISSFWRPGTPIKIDLFDGEDAAGWLLEQKAGSRKHLANLLSQRLPARLADAWCAAAGVDGSLPLHDIA DKALRRLGASLNDWQVVPSGTEGYRKAEVTIGGVDTRGLSSTTMMAREVEGLYFIGEVVDVTGWLGGYNFQWAWASAVAA GHALAEAARNGRAVA
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=400, Percent_Identity=51.25, Blast_Score=376, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 44581; Mature: 44450
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVAGRQAGRYDVAVLGAGAAGMMCAAVAGQGGARVVLIDHATKLAEKIRISGGGRCNF CCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCEEEE TNLQAGPANYLSSNPHFCRSALARYTPQHFLELMRRHRIDWHEKHRGQLFCNDSAEDVIA CCCCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHCCCCCEEECCCHHHHHH MLRAECDAGHVHWQTGCSIEEVRREGDDYLLLTSQGTVRARALVVATGGLSIPKIGATDF HHHHCCCCCCEEEECCCCHHHHHHCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCHH GYRIARQFGLKIIETRPALVPLTFDGQAWQPFVPLAGVSLEVDISTGAGKTAGAFREDLL HHHHHHHHCCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH WTHRGLSGPAVLQISSFWRPGTPIKIDLFDGEDAAGWLLEQKAGSRKHLANLLSQRLPAR HHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCHH LADAWCAAAGVDGSLPLHDIADKALRRLGASLNDWQVVPSGTEGYRKAEVTIGGVDTRGL HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEEECCCCCCC SSTTMMAREVEGLYFIGEVVDVTGWLGGYNFQWAWASAVAAGHALAEAARNGRAVA CHHHHHHHHHCCEEEEHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SGVAGRQAGRYDVAVLGAGAAGMMCAAVAGQGGARVVLIDHATKLAEKIRISGGGRCNF CCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCEEEE TNLQAGPANYLSSNPHFCRSALARYTPQHFLELMRRHRIDWHEKHRGQLFCNDSAEDVIA CCCCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHCCCCCEEECCCHHHHHH MLRAECDAGHVHWQTGCSIEEVRREGDDYLLLTSQGTVRARALVVATGGLSIPKIGATDF HHHHCCCCCCEEEECCCCHHHHHHCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCHH GYRIARQFGLKIIETRPALVPLTFDGQAWQPFVPLAGVSLEVDISTGAGKTAGAFREDLL HHHHHHHHCCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH WTHRGLSGPAVLQISSFWRPGTPIKIDLFDGEDAAGWLLEQKAGSRKHLANLLSQRLPAR HHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCHH LADAWCAAAGVDGSLPLHDIADKALRRLGASLNDWQVVPSGTEGYRKAEVTIGGVDTRGL HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEEECCCCCCC SSTTMMAREVEGLYFIGEVVDVTGWLGGYNFQWAWASAVAAGHALAEAARNGRAVA CHHHHHHHHHCCEEEEHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]