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The map label for this gene is ybbK [C]

Identifier: 73540555

GI number: 73540555

Start: 923792

End: 924565

Strand: Reverse

Name: ybbK [C]

Synonym: Reut_A0852

Alternate gene names: 73540555

Gene position: 924565-923792 (Counterclockwise)

Preceding gene: 73540556

Following gene: 73540552

Centisome position: 24.29

GC content: 62.79

Gene sequence:

>774_bases
ATGGCATACGGATTCAGCTTCGGCGGTTTGATCTTCCTGCTGGCCTTGCTCGTCATTACCGCGTTCCGCGTGCTGCGCGA
ATACGAACGCGGCGTGGTGTTCATGCTCGGGCGCTTCTGGAAGGTGAAGGGGCCAGGCCTGGTGCTGATCATCCCGGTTG
TGCAGCAGATGGTCCGCGTGGACCTGCGCACCGTGGTCATGGACGTGCCGCCGCAGGACGTGATCTCGCACGACAACGTA
TCGGTCAAGGTCAACGCGGTGGTCTACTTCCGGGTGGTCGACCCGGAGCGCGCCATCATCCAGGTCGCCAACTTTCTCGA
AGCCACGAGCCAGCTCGCGCAGACCACGCTGCGCGCGGTACTCGGCAAGCATGAACTGGACGAGATGCTGGCCGAGCGCG
AACGGCTCAACCTCGACATCCAGAAGGTACTCGACGCGCAGACCGATGCGTGGGGCATCAAGGTATCGAACGTGGAGATC
AAGCATGTCGACCTGAACGAGTCGATGGTACGCGCCATCGCGCGGCAGGCCGAGGCGGAACGGGAACGGCGCGCCAAGGT
CATTCATGCCGAAGGCGAACTGCAGGCTTCGGAGAAGCTGCTGGAAGCGGCGCAGATGCTCGCGCGACAGCCTCAGGCGA
TGCAACTGCGGTATATGCAGACGCTGACGCAGATTGCGGGGGACAAGAGTTCGACGATTGTGTTTCCGTTGCCCATGGAT
CTGCTGTCTGCGCTGATGAGCAAGCCGGGGGGTGGGCCGGAGGGGCGAGGTTAG

Upstream 100 bases:

>100_bases
CACGCCTGTCATTGTCACAGCACGCGAGGGGCTGCTGCTCGATGTCGTCAGCGCCCCGGAAATCCCGCCCGCACGCCAAC
CAACCTGAGGGAGCCTGACC

Downstream 100 bases:

>100_bases
CGCGGCCGCGTCGCGCAGGGTTCAAGTTACTGGCTTGTCTCGCCCTCGGGGCACGTCGGGCATATTGGGAAGTGCGCCGC
CCGCAGCAGCCAAGCGCTTT

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MAYGFSFGGLIFLLALLVITAFRVLREYERGVVFMLGRFWKVKGPGLVLIIPVVQQMVRVDLRTVVMDVPPQDVISHDNV
SVKVNAVVYFRVVDPERAIIQVANFLEATSQLAQTTLRAVLGKHELDEMLAERERLNLDIQKVLDAQTDAWGIKVSNVEI
KHVDLNESMVRAIARQAEAERERRAKVIHAEGELQASEKLLEAAQMLARQPQAMQLRYMQTLTQIAGDKSSTIVFPLPMD
LLSALMSKPGGGPEGRG

Sequences:

>Translated_257_residues
MAYGFSFGGLIFLLALLVITAFRVLREYERGVVFMLGRFWKVKGPGLVLIIPVVQQMVRVDLRTVVMDVPPQDVISHDNV
SVKVNAVVYFRVVDPERAIIQVANFLEATSQLAQTTLRAVLGKHELDEMLAERERLNLDIQKVLDAQTDAWGIKVSNVEI
KHVDLNESMVRAIARQAEAERERRAKVIHAEGELQASEKLLEAAQMLARQPQAMQLRYMQTLTQIAGDKSSTIVFPLPMD
LLSALMSKPGGGPEGRG
>Mature_256_residues
AYGFSFGGLIFLLALLVITAFRVLREYERGVVFMLGRFWKVKGPGLVLIIPVVQQMVRVDLRTVVMDVPPQDVISHDNVS
VKVNAVVYFRVVDPERAIIQVANFLEATSQLAQTTLRAVLGKHELDEMLAERERLNLDIQKVLDAQTDAWGIKVSNVEIK
HVDLNESMVRAIARQAEAERERRAKVIHAEGELQASEKLLEAAQMLARQPQAMQLRYMQTLTQIAGDKSSTIVFPLPMDL
LSALMSKPGGGPEGRG

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=248, Percent_Identity=46.3709677419355, Blast_Score=213, Evalue=1e-55,
Organism=Homo sapiens, GI221316744, Length=245, Percent_Identity=46.1224489795918, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI21686995, Length=245, Percent_Identity=46.1224489795918, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI7657615, Length=248, Percent_Identity=35.8870967741936, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI7305503, Length=206, Percent_Identity=34.9514563106796, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI20149563, Length=158, Percent_Identity=35.4430379746835, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI38016907, Length=61, Percent_Identity=57.3770491803279, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1786697, Length=188, Percent_Identity=36.1702127659575, Blast_Score=130, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI17569493, Length=245, Percent_Identity=47.3469387755102, Blast_Score=219, Evalue=9e-58,
Organism=Caenorhabditis elegans, GI193209764, Length=238, Percent_Identity=47.0588235294118, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI25153583, Length=246, Percent_Identity=46.3414634146341, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71987612, Length=246, Percent_Identity=46.3414634146341, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71987621, Length=246, Percent_Identity=46.3414634146341, Blast_Score=205, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17569497, Length=253, Percent_Identity=41.1067193675889, Blast_Score=200, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17569499, Length=243, Percent_Identity=44.4444444444444, Blast_Score=198, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17570459, Length=248, Percent_Identity=42.741935483871, Blast_Score=196, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17570161, Length=253, Percent_Identity=43.4782608695652, Blast_Score=193, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI193210507, Length=253, Percent_Identity=43.4782608695652, Blast_Score=193, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71989948, Length=230, Percent_Identity=46.0869565217391, Blast_Score=185, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI32566490, Length=239, Percent_Identity=45.1882845188285, Blast_Score=178, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI71989955, Length=180, Percent_Identity=47.7777777777778, Blast_Score=145, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71989963, Length=114, Percent_Identity=49.1228070175439, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI32564147, Length=177, Percent_Identity=34.4632768361582, Blast_Score=110, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17542664, Length=167, Percent_Identity=25.748502994012, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI45556022, Length=240, Percent_Identity=49.5833333333333, Blast_Score=225, Evalue=2e-59,
Organism=Drosophila melanogaster, GI18860517, Length=245, Percent_Identity=46.530612244898, Blast_Score=209, Evalue=1e-54,
Organism=Drosophila melanogaster, GI62484448, Length=247, Percent_Identity=49.7975708502024, Blast_Score=206, Evalue=1e-53,
Organism=Drosophila melanogaster, GI281365664, Length=247, Percent_Identity=49.7975708502024, Blast_Score=206, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24657857, Length=247, Percent_Identity=49.7975708502024, Blast_Score=206, Evalue=1e-53,
Organism=Drosophila melanogaster, GI62484274, Length=247, Percent_Identity=49.7975708502024, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI281361631, Length=248, Percent_Identity=37.9032258064516, Blast_Score=188, Evalue=3e-48,
Organism=Drosophila melanogaster, GI281361633, Length=248, Percent_Identity=37.9032258064516, Blast_Score=188, Evalue=3e-48,
Organism=Drosophila melanogaster, GI21356845, Length=237, Percent_Identity=37.1308016877637, Blast_Score=187, Evalue=5e-48,
Organism=Drosophila melanogaster, GI28573263, Length=239, Percent_Identity=38.9121338912134, Blast_Score=183, Evalue=8e-47,
Organism=Drosophila melanogaster, GI281361635, Length=186, Percent_Identity=39.7849462365591, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI45550506, Length=165, Percent_Identity=38.1818181818182, Blast_Score=122, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 28659; Mature: 28528

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYGFSFGGLIFLLALLVITAFRVLREYERGVVFMLGRFWKVKGPGLVLIIPVVQQMVRV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHEEECCCCEEEEHHHHHHHHHH
DLRTVVMDVPPQDVISHDNVSVKVNAVVYFRVVDPERAIIQVANFLEATSQLAQTTLRAV
HHHHHHCCCCCHHHHCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LGKHELDEMLAERERLNLDIQKVLDAQTDAWGIKVSNVEIKHVDLNESMVRAIARQAEAE
HCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHH
RERRAKVIHAEGELQASEKLLEAAQMLARQPQAMQLRYMQTLTQIAGDKSSTIVFPLPMD
HHHHHHEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHH
LLSALMSKPGGGPEGRG
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AYGFSFGGLIFLLALLVITAFRVLREYERGVVFMLGRFWKVKGPGLVLIIPVVQQMVRV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHEEECCCCEEEEHHHHHHHHHH
DLRTVVMDVPPQDVISHDNVSVKVNAVVYFRVVDPERAIIQVANFLEATSQLAQTTLRAV
HHHHHHCCCCCHHHHCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LGKHELDEMLAERERLNLDIQKVLDAQTDAWGIKVSNVEIKHVDLNESMVRAIARQAEAE
HCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHH
RERRAKVIHAEGELQASEKLLEAAQMLARQPQAMQLRYMQTLTQIAGDKSSTIVFPLPMD
HHHHHHEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHH
LLSALMSKPGGGPEGRG
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]