| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540523
Identifier: 73540523
GI number: 73540523
Start: 890942
End: 891415
Strand: Direct
Name: 73540523
Synonym: Reut_A0820
Alternate gene names: NA
Gene position: 890942-891415 (Clockwise)
Preceding gene: 73540521
Following gene: 73540526
Centisome position: 23.41
GC content: 65.82
Gene sequence:
>474_bases ATGCCGCCCGCCGCGCCAGCCCCTTCCATGGATTCCAAAAGCCAGCTCTCTTCCGACGGCCTGCCCGCCGACCTGCATCT GGGCGAACCGGTCACCGACGCCACGCATGCGGAATTCGTGCAGTTGCTTGCAGCCGTCGCAGGTGCCGATGACGCCGGTT TCCTCGCGGCCATGGACGAATGGATCGATCACACGCGCCATCACTTTGCCCAGGAGGAATCCTGGATGGAGGCGATGGGG TTCGGGCCGCGCCACTGTCATGCCGGCGAGCACCAGCAGGTATTGGCCGTGGCCAAGGCGGTGCGCGACAAGGTTGCCAG CGACGGGGAACTGGAGCTGGGCCGCCGGCTGGCGGCCGAACTGTCGGGCTGGTTCGACCACCACGTCAAGTCCATGGACG CGATGATGGTCGAGCACATGCAGAAGAACGGCTTCACACTGGTCGAAGGTCCTGCCGACCAGCCGGCAGCCTGA
Upstream 100 bases:
>100_bases GGCGGCGCAGCATCAAGCATAACCGCTCGCGCGTCCCGGGCGGATTTGAGCGAAATCAGATGCCGGGCCACTGATTTCGG TATCCTTTCCGTTTCTTTCC
Downstream 100 bases:
>100_bases TTCAGGCTGATTGCGCAGCCTCGCGGTCAATCACGACGAAGTACTTGCGCACGCGCTCCAGCACTTCAAACAGGCCAGTG AATCCTGCCGGAATCACGCA
Product: cation-binding hemerythrin HHE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPPAAPAPSMDSKSQLSSDGLPADLHLGEPVTDATHAEFVQLLAAVAGADDAGFLAAMDEWIDHTRHHFAQEESWMEAMG FGPRHCHAGEHQQVLAVAKAVRDKVASDGELELGRRLAAELSGWFDHHVKSMDAMMVEHMQKNGFTLVEGPADQPAA
Sequences:
>Translated_157_residues MPPAAPAPSMDSKSQLSSDGLPADLHLGEPVTDATHAEFVQLLAAVAGADDAGFLAAMDEWIDHTRHHFAQEESWMEAMG FGPRHCHAGEHQQVLAVAKAVRDKVASDGELELGRRLAAELSGWFDHHVKSMDAMMVEHMQKNGFTLVEGPADQPAA >Mature_156_residues PPAAPAPSMDSKSQLSSDGLPADLHLGEPVTDATHAEFVQLLAAVAGADDAGFLAAMDEWIDHTRHHFAQEESWMEAMGF GPRHCHAGEHQQVLAVAKAVRDKVASDGELELGRRLAAELSGWFDHHVKSMDAMMVEHMQKNGFTLVEGPADQPAA
Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]
COG id: COG2703
COG function: function code P; Hemerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemerythrin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012827 - InterPro: IPR012312 - InterPro: IPR016131 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 16901; Mature: 16770
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00550 HEMERYTHRINS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAAPAPSMDSKSQLSSDGLPADLHLGEPVTDATHAEFVQLLAAVAGADDAGFLAAMDE CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH WIDHTRHHFAQEESWMEAMGFGPRHCHAGEHQQVLAVAKAVRDKVASDGELELGRRLAAE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LSGWFDHHVKSMDAMMVEHMQKNGFTLVEGPADQPAA HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC >Mature Secondary Structure PPAAPAPSMDSKSQLSSDGLPADLHLGEPVTDATHAEFVQLLAAVAGADDAGFLAAMDE CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH WIDHTRHHFAQEESWMEAMGFGPRHCHAGEHQQVLAVAKAVRDKVASDGELELGRRLAAE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LSGWFDHHVKSMDAMMVEHMQKNGFTLVEGPADQPAA HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]