| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is kynB
Identifier: 73540512
GI number: 73540512
Start: 879332
End: 879991
Strand: Reverse
Name: kynB
Synonym: Reut_A0809
Alternate gene names: 73540512
Gene position: 879991-879332 (Counterclockwise)
Preceding gene: 73540514
Following gene: 73540511
Centisome position: 23.12
GC content: 67.88
Gene sequence:
>660_bases ATGACCAACCGCCCCGCAACGCCCGCCGACAGCCGCAAGCTGTGGGACATCAGCCCCCCGCTTTCCCCCGCCACGCCCGT GTGGCCCGGCGACACGCCGTTCCAACAGGAAACCGCTTGGCAGATGGATGAGCACTGCCCGGTCAATGTCGGCCGCATCA CGCTGTCGCCGCATACCGGCGCCCATGCCGACGCGCCGCTGCACTATGCCGCTGATGGGGCGCCGATCGGCGAAGTTGGC CTGGAACCGTACCTTGGCCGTTGCCGCGTGATCCATTGCGTGGGTGCCACGCCCGTCGTCGCACCACATCACGTGGAACA TGCGCTGAACGACCTGCCGACGCGCGTGCTGCTGCGCACGTACAAACGCGCGCCGCTCGATCAATGGGACACCGGTTTCT GCGCCGTCGCCCCCGAAACCATTGCACTGCTTGCCGCGCACGGCGTGCAGCTGATCGGCATCGACACGCCGTCGCTGGAC CCGCAGGAGTCCAAGACCATGGACGCGCACAAGGCCGTGCGCCGCCACGGGCTGGCCATTCTCGAAGGCCTGGTGCTCGA TGCCGTCGCCGAAGGCGACTACGAACTCATTGCGCTGCCGCTGCGCTTTACCGGGCTCGACGCAAGCCCGGTGCGTGCCG TGCTGCGCAGCCTTGACTGA
Upstream 100 bases:
>100_bases CATTCAGCAGTGGATTTCGCAAGCCTCTTGCCGGTTTTTTTGACTATCATGCCGTCATCGAGGACGACATCGACGCCGCC CCTGCGGCAGCCGTGCAGAC
Downstream 100 bases:
>100_bases ACACCCCCCGTAATCCTTTGCCTCTTTCCGACATGACTGCACTGACCCGCGAGCAATGCCTGTTGCTCGACCAGCAAGAC CCCCTGCGCGCATTGCGCGA
Product: putative cyclase
Products: NA
Alternate protein names: KFA; N-formylkynurenine formamidase
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTNRPATPADSRKLWDISPPLSPATPVWPGDTPFQQETAWQMDEHCPVNVGRITLSPHTGAHADAPLHYAADGAPIGEVG LEPYLGRCRVIHCVGATPVVAPHHVEHALNDLPTRVLLRTYKRAPLDQWDTGFCAVAPETIALLAAHGVQLIGIDTPSLD PQESKTMDAHKAVRRHGLAILEGLVLDAVAEGDYELIALPLRFTGLDASPVRAVLRSLD
Sequences:
>Translated_219_residues MTNRPATPADSRKLWDISPPLSPATPVWPGDTPFQQETAWQMDEHCPVNVGRITLSPHTGAHADAPLHYAADGAPIGEVG LEPYLGRCRVIHCVGATPVVAPHHVEHALNDLPTRVLLRTYKRAPLDQWDTGFCAVAPETIALLAAHGVQLIGIDTPSLD PQESKTMDAHKAVRRHGLAILEGLVLDAVAEGDYELIALPLRFTGLDASPVRAVLRSLD >Mature_218_residues TNRPATPADSRKLWDISPPLSPATPVWPGDTPFQQETAWQMDEHCPVNVGRITLSPHTGAHADAPLHYAADGAPIGEVGL EPYLGRCRVIHCVGATPVVAPHHVEHALNDLPTRVLLRTYKRAPLDQWDTGFCAVAPETIALLAAHGVQLIGIDTPSLDP QESKTMDAHKAVRRHGLAILEGLVLDAVAEGDYELIALPLRFTGLDASPVRAVLRSLD
Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KYNB_CUPPJ (Q474J5)
Other databases:
- EMBL: CP000090 - RefSeq: YP_295032.1 - ProteinModelPortal: Q474J5 - SMR: Q474J5 - GeneID: 3610803 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A0809 - NMPDR: fig|264198.3.peg.1322 - HOGENOM: HBG686791 - OMA: CPVNVGR - ProtClustDB: CLSK769116 - BioCyc: REUT264198:REUT_A0809-MONOMER - InterPro: IPR017484 - InterPro: IPR007325 - TIGRFAMs: TIGR03035
Pfam domain/function: PF04199 Cyclase
EC number: =3.5.1.9
Molecular weight: Translated: 23616; Mature: 23485
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRPATPADSRKLWDISPPLSPATPVWPGDTPFQQETAWQMDEHCPVNVGRITLSPHTG CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCC AHADAPLHYAADGAPIGEVGLEPYLGRCRVIHCVGATPVVAPHHVEHALNDLPTRVLLRT CCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCHHHHHHHH YKRAPLDQWDTGFCAVAPETIALLAAHGVQLIGIDTPSLDPQESKTMDAHKAVRRHGLAI HHCCCCCCCCCCEEEECHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LEGLVLDAVAEGDYELIALPLRFTGLDASPVRAVLRSLD HHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure TNRPATPADSRKLWDISPPLSPATPVWPGDTPFQQETAWQMDEHCPVNVGRITLSPHTG CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCC AHADAPLHYAADGAPIGEVGLEPYLGRCRVIHCVGATPVVAPHHVEHALNDLPTRVLLRT CCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCHHHHHHHH YKRAPLDQWDTGFCAVAPETIALLAAHGVQLIGIDTPSLDPQESKTMDAHKAVRRHGLAI HHCCCCCCCCCCEEEECHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH LEGLVLDAVAEGDYELIALPLRFTGLDASPVRAVLRSLD HHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA