| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540492
Identifier: 73540492
GI number: 73540492
Start: 859019
End: 859510
Strand: Direct
Name: 73540492
Synonym: Reut_A0788
Alternate gene names: NA
Gene position: 859019-859510 (Clockwise)
Preceding gene: 73540491
Following gene: 73540495
Centisome position: 22.57
GC content: 65.04
Gene sequence:
>492_bases ATGAACGCACGCACTCTGGCACACCGGGGTAGCACGGGTCTATGCCGCACCCGGCGCCTGGCTCAAGGCATGACGCTGAT GGAACTGATGGCCGTCGTGGCCATCCTCGGCATCCTGGCCGCGATCGCCATTCCCAACTACACAGAGTATGTGCGGCGCG GCTACCGCGCCGACGCGCGCGGCATGATGACGGAAGCCGCGCAGGTGCTCGAGCGGTTCCGCTCAGTCAACGGGCGCTAC AACCAGGACGTGGGCGGGAATGCTTTTGCGTTGCCGGCGGGGCTGCGGACGTCGCCGCGCGACAGTACGCGCGTGCGCTA CAACGTTTCGATCGTTGCCAATTCGCTGACTGCGAACAGTTATCTGCTCCAGGCTGTTCCCGTGGATGCCACGGATGCCT GCGGCACCTATACGCTGGATCAGGCCGGCACGCGTCTGAATACCGTTGGCGCGAACCCGGCGGCGTACCTGCAGAATTGC TGGGAGCGCTGA
Upstream 100 bases:
>100_bases GCCACCTGAAAGTGGCCAGCGCGACAACCGGCGAGGTCATCAGCGTCGTCGAACAAGGCAACGTCGCACGCAACCGCCTT TCATGGAGGCAGATTTCGCA
Downstream 100 bases:
>100_bases CGCCGAGGGGGCGGCCACGCTCTAGCGCTTGCTATTCCCTGACGTCACCTCGGCCAGCACATCGGAAAACTCGGCGACAT CCTCAAAGCTCCGATACACG
Product: fimbrial protein pilin
Products: NA
Alternate protein names: Type IV Pilin PilE; Type IV Pilin; Type IV Fimbrial Biogenesis Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNARTLAHRGSTGLCRTRRLAQGMTLMELMAVVAILGILAAIAIPNYTEYVRRGYRADARGMMTEAAQVLERFRSVNGRY NQDVGGNAFALPAGLRTSPRDSTRVRYNVSIVANSLTANSYLLQAVPVDATDACGTYTLDQAGTRLNTVGANPAAYLQNC WER
Sequences:
>Translated_163_residues MNARTLAHRGSTGLCRTRRLAQGMTLMELMAVVAILGILAAIAIPNYTEYVRRGYRADARGMMTEAAQVLERFRSVNGRY NQDVGGNAFALPAGLRTSPRDSTRVRYNVSIVANSLTANSYLLQAVPVDATDACGTYTLDQAGTRLNTVGANPAAYLQNC WER >Mature_163_residues MNARTLAHRGSTGLCRTRRLAQGMTLMELMAVVAILGILAAIAIPNYTEYVRRGYRADARGMMTEAAQVLERFRSVNGRY NQDVGGNAFALPAGLRTSPRDSTRVRYNVSIVANSLTANSYLLQAVPVDATDACGTYTLDQAGTRLNTVGANPAAYLQNC WER
Specific function: Unknown
COG id: COG4968
COG function: function code NU; Tfp pilus assembly protein PilE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17733; Mature: 17733
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARTLAHRGSTGLCRTRRLAQGMTLMELMAVVAILGILAAIAIPNYTEYVRRGYRADAR CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHH GMMTEAAQVLERFRSVNGRYNQDVGGNAFALPAGLRTSPRDSTRVRYNVSIVANSLTANS HHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCC YLLQAVPVDATDACGTYTLDQAGTRLNTVGANPAAYLQNCWER EEEEEECCCCCCCCCCEEHHCCCCEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MNARTLAHRGSTGLCRTRRLAQGMTLMELMAVVAILGILAAIAIPNYTEYVRRGYRADAR CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHH GMMTEAAQVLERFRSVNGRYNQDVGGNAFALPAGLRTSPRDSTRVRYNVSIVANSLTANS HHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCC YLLQAVPVDATDACGTYTLDQAGTRLNTVGANPAAYLQNCWER EEEEEECCCCCCCCCCEEHHCCCCEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA