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The map label for this gene is fdhD [H]

Identifier: 73540326

GI number: 73540326

Start: 668780

End: 669646

Strand: Direct

Name: fdhD [H]

Synonym: Reut_A0620

Alternate gene names: 73540326

Gene position: 668780-669646 (Clockwise)

Preceding gene: 73540325

Following gene: 73540327

Centisome position: 17.57

GC content: 65.4

Gene sequence:

>867_bases
ATGATGCGCTGCATGAACGGACCGGAACTCGAACCGGTCCAGGAAGCGGATGGCGAACCGGCCACGCACAGCACCTTCGC
GGTGAGCCGGTGGCGCCACGGCGAACATGCGCTGAGTCCTGACGAGCTCGCTGAAGAGGTGCCCGTCGCGCTGGAATACA
ACGGTATCTCCCATGCGGTGATGCTGGCCACGCCGGCTGATCTCGAAGACTTCGCGCTTGGCTTCAGCCTGAGCGAAGGC
ATTGTCTCCAATGCGCGCGATGTGTACGACATCGAGACCGAGGCGCGCGAACACGGCATTGCCGTGCGTATCGAGATCGC
CTCGGAAGCCTTCATGGGTCTCAAGGAGCGGCGCCGATCGCTGGCCGGCCGCACTGGCTGTGGCCTGTGTGGTACGGAAT
CGCTGGAGCAGGTGATGCGCATGCCTGCGCCGGTGAAGAGTGCAGCGAGCTTCCACACCGACGTGATCCAGGCCGCGTTC
GTGCAGCTCCAGTTGCGGCAGGCGCTGCAGCGCGAAACCGGCGCAACGCATGCTGCTGCTTGGCTGCGTGCCGACGGCCA
TGTCGCGATGGTGCGCGAGGACGTGGGGCGCCACAATGCGCTCGACAAACTTGCCGGTGCGCTCGCGCGCAGCGGCGAGG
ACATTGCCAGCGGCGCGGTGCTGGTGACCAGCCGCGCGAGCTATGAAATAGTGCTCAAGACTGCGGCCATTGGCGCCGGT
GTGCTCGCTGCCGTTTCAGCGCCCACGGCACTGGCCGTGCGGCTCGCCGAGCAGGCCAACATTACGCTGGCCGGCTTCGT
CCGCGCGAGTGGCCACGTGGTTTATTCCCATCCCCAACGACTGCAACACGAAGCGAGTCTGGTATGA

Upstream 100 bases:

>100_bases
GAAGCAATATCAGGCGTTCAACGCGCAGCAGCTTCAGCTGCTCGAAGCGGCGAGCACCGATTCGGCCCAGGCCGCGGTGG
GCTGACAGGAGGATCGCATC

Downstream 100 bases:

>100_bases
AGATCGACAACCTGATTACGATGGCCAATCAGATTGGCAGCTTCTTTGAGGCTATGCCGGATCGAGAGGAGGCATTGGCC
GATATCGCCGGGCATATCAA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: Protein fdsC [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MMRCMNGPELEPVQEADGEPATHSTFAVSRWRHGEHALSPDELAEEVPVALEYNGISHAVMLATPADLEDFALGFSLSEG
IVSNARDVYDIETEAREHGIAVRIEIASEAFMGLKERRRSLAGRTGCGLCGTESLEQVMRMPAPVKSAASFHTDVIQAAF
VQLQLRQALQRETGATHAAAWLRADGHVAMVREDVGRHNALDKLAGALARSGEDIASGAVLVTSRASYEIVLKTAAIGAG
VLAAVSAPTALAVRLAEQANITLAGFVRASGHVVYSHPQRLQHEASLV

Sequences:

>Translated_288_residues
MMRCMNGPELEPVQEADGEPATHSTFAVSRWRHGEHALSPDELAEEVPVALEYNGISHAVMLATPADLEDFALGFSLSEG
IVSNARDVYDIETEAREHGIAVRIEIASEAFMGLKERRRSLAGRTGCGLCGTESLEQVMRMPAPVKSAASFHTDVIQAAF
VQLQLRQALQRETGATHAAAWLRADGHVAMVREDVGRHNALDKLAGALARSGEDIASGAVLVTSRASYEIVLKTAAIGAG
VLAAVSAPTALAVRLAEQANITLAGFVRASGHVVYSHPQRLQHEASLV
>Mature_288_residues
MMRCMNGPELEPVQEADGEPATHSTFAVSRWRHGEHALSPDELAEEVPVALEYNGISHAVMLATPADLEDFALGFSLSEG
IVSNARDVYDIETEAREHGIAVRIEIASEAFMGLKERRRSLAGRTGCGLCGTESLEQVMRMPAPVKSAASFHTDVIQAAF
VQLQLRQALQRETGATHAAAWLRADGHVAMVREDVGRHNALDKLAGALARSGEDIASGAVLVTSRASYEIVLKTAAIGAG
VLAAVSAPTALAVRLAEQANITLAGFVRASGHVVYSHPQRLQHEASLV

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=243, Percent_Identity=52.6748971193416, Blast_Score=253, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30689; Mature: 30689

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRCMNGPELEPVQEADGEPATHSTFAVSRWRHGEHALSPDELAEEVPVALEYNGISHAV
CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCEEEEECCCCEEE
MLATPADLEDFALGFSLSEGIVSNARDVYDIETEAREHGIAVRIEIASEAFMGLKERRRS
EEECCCCHHHHHHCCCHHHHHHHCCCCEEECHHHHHHCCCEEEEEECHHHHHHHHHHHHH
LAGRTGCGLCGTESLEQVMRMPAPVKSAASFHTDVIQAAFVQLQLRQALQRETGATHAAA
HCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
WLRADGHVAMVREDVGRHNALDKLAGALARSGEDIASGAVLVTSRASYEIVLKTAAIGAG
HEECCCCEEEHHHHHCCHHHHHHHHHHHHHCCCCHHCCEEEEEECCCEEEEEEEHHHHHH
VLAAVSAPTALAVRLAEQANITLAGFVRASGHVVYSHPQRLQHEASLV
HHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCEEECCHHHHHHHHCCC
>Mature Secondary Structure
MMRCMNGPELEPVQEADGEPATHSTFAVSRWRHGEHALSPDELAEEVPVALEYNGISHAV
CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCEEEEECCCCEEE
MLATPADLEDFALGFSLSEGIVSNARDVYDIETEAREHGIAVRIEIASEAFMGLKERRRS
EEECCCCHHHHHHCCCHHHHHHHCCCCEEECHHHHHHCCCEEEEEECHHHHHHHHHHHHH
LAGRTGCGLCGTESLEQVMRMPAPVKSAASFHTDVIQAAFVQLQLRQALQRETGATHAAA
HCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
WLRADGHVAMVREDVGRHNALDKLAGALARSGEDIASGAVLVTSRASYEIVLKTAAIGAG
HEECCCCEEEHHHHHCCHHHHHHHHHHHHHCCCCHHCCEEEEEECCCEEEEEEEHHHHHH
VLAAVSAPTALAVRLAEQANITLAGFVRASGHVVYSHPQRLQHEASLV
HHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9756865 [H]