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The map label for this gene is fimA [H]

Identifier: 73540239

GI number: 73540239

Start: 579668

End: 580153

Strand: Direct

Name: fimA [H]

Synonym: Reut_A0533

Alternate gene names: 73540239

Gene position: 579668-580153 (Clockwise)

Preceding gene: 73540238

Following gene: 73540240

Centisome position: 15.23

GC content: 56.58

Gene sequence:

>486_bases
ATGCAACGGGTACAACAAATCAAGAAGCTGGGCCGTCGGGTTCAGAAGGGTTTTACGCTGATCGAACTGATGATCGTGGT
TGCGATCATTGGTATTTTGGCGGCTATTGCTATTCCGCAATATCAGGACTACGTGACGCGCGCACGTTGGTCGGACAACA
TCACGTCTATTGCTCCCTTGAAGCAGGCGATTGCGGAATGCGTACAAAACAACGCTCAGGCAGCAATTGCTGCGCCTTGC
GACGACGCTACCGCAGCAACGGGCTTGGTAAGCACCGCTGGTGGTGGCTACACGGCGGGCGTTCCTACGCCGTCGAGCGC
TACTGTGACCTATACCGGTGGTGTGATCACCCTTACGGGTACCGCCGCTGCAGGGAACTGCGTTGTGACCGTCACGCCGG
TGCCCTCGGCAACAGCTGTTACTTGGACTGTTGCGAACCAAGCCGGCGGCGCAGTAGTTTGCACTAAGTCCAAGACTGGT
GTCTAA

Upstream 100 bases:

>100_bases
GTATCGGTGCCTGGCACAGTACCTGCTCTAGCCTCCCCGCACTTCACAAAATCGAAGACGTGCAGTGCATCAACCTAAAA
TCTCTTCGAGGGGTCATCTC

Downstream 100 bases:

>100_bases
TTTGACCCTGAATAGATGCGTAAAGGAAGGCGCCTTCGGGCGCCTTTTTCTTTATTCATCTACCAAGCTATCATGCGCCT
TTTCCCAACAAGGCGCCGCA

Product: general secretion pathway protein H

Products: NA

Alternate protein names: Pilin; Serogroup I [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQRVQQIKKLGRRVQKGFTLIELMIVVAIIGILAAIAIPQYQDYVTRARWSDNITSIAPLKQAIAECVQNNAQAAIAAPC
DDATAATGLVSTAGGGYTAGVPTPSSATVTYTGGVITLTGTAAAGNCVVTVTPVPSATAVTWTVANQAGGAVVCTKSKTG
V

Sequences:

>Translated_161_residues
MQRVQQIKKLGRRVQKGFTLIELMIVVAIIGILAAIAIPQYQDYVTRARWSDNITSIAPLKQAIAECVQNNAQAAIAAPC
DDATAATGLVSTAGGGYTAGVPTPSSATVTYTGGVITLTGTAAAGNCVVTVTPVPSATAVTWTVANQAGGAVVCTKSKTG
V
>Mature_161_residues
MQRVQQIKKLGRRVQKGFTLIELMIVVAIIGILAAIAIPQYQDYVTRARWSDNITSIAPLKQAIAECVQNNAQAAIAAPC
DDATAATGLVSTAGGGYTAGVPTPSSATVTYTGGVITLTGTAAAGNCVVTVTPVPSATAVTWTVANQAGGAVVCTKSKTG
V

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

Organism=Escherichia coli, GI1786297, Length=135, Percent_Identity=34.8148148148148, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 16320; Mature: 16320

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVQQIKKLGRRVQKGFTLIELMIVVAIIGILAAIAIPQYQDYVTRARWSDNITSIAPL
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
KQAIAECVQNNAQAAIAAPCDDATAATGLVSTAGGGYTAGVPTPSSATVTYTGGVITLTG
HHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCEECCCCCCCCCEEEEECCEEEEEE
TAAAGNCVVTVTPVPSATAVTWTVANQAGGAVVCTKSKTGV
CCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCC
>Mature Secondary Structure
MQRVQQIKKLGRRVQKGFTLIELMIVVAIIGILAAIAIPQYQDYVTRARWSDNITSIAPL
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
KQAIAECVQNNAQAAIAAPCDDATAATGLVSTAGGGYTAGVPTPSSATVTYTGGVITLTG
HHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCEECCCCCCCCCEEEEECCEEEEEE
TAAAGNCVVTVTPVPSATAVTWTVANQAGGAVVCTKSKTGV
CCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1675419 [H]