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The map label for this gene is fimZ [H]

Identifier: 73540228

GI number: 73540228

Start: 567744

End: 568382

Strand: Direct

Name: fimZ [H]

Synonym: Reut_A0522

Alternate gene names: 73540228

Gene position: 567744-568382 (Clockwise)

Preceding gene: 73540227

Following gene: 73540233

Centisome position: 14.91

GC content: 69.48

Gene sequence:

>639_bases
TTGGACCCCATCCCGTTTGATGAAGCCCTGATCGTCGATGCGCGGCCGGTGCCGCCCGGCGAGGCGTCGTGGCAGCTTGC
CCACGCGCTCGGTGCGCGCCGGACGCTGCTGGCCGACAATGTGCGGCAGGCCCAGCAGATGGTGCGGGAGCGCCAGCCGG
GGCTGGTGGTCGTCGAGCTGGACGCGCTGGGGCAGGCCGGCATCACGCTGATCAAGCGCCTGGCTGCGCGCCATCCGGAC
GTGCGGCTGCTGGTGTTGTCCGACAGCGATGCGACGATGGCGCCCGTTCAGGCGCTGCGCGCCGGCGCCCACGGCTTCGT
GCCGCGGCAGCGCGATCTCGCGGAAATGGTCCAGGCCGCGCGCGGCGTGATGTCCGGCTACCTGGTCTTTCCGACGCATA
CGCTGGACGCCGCGCGCAAGTTGCGCCTGCCATCGGCCGGCAAGCTCGCGCGGCTGACCGCGCGCGAACTCACGGTGCTC
CAGTACCTCGCGCGTGGCCATTCCAACAAGACGATCGGCGCGCGGCTGCTGATCAGCAGCAAGACCGTCAGCACCCACAA
GACCAACATCATGTGCAAGCTCAACGTGGGGTCGGTGGTCGAGATGGTCGACTATGCGCGCCAGCACCGGTTGCTGTGA

Upstream 100 bases:

>100_bases
GCGTCGCGACGGCTTTGCGTTCGGATGCAGCCGTTTCAGCGCTCGGGCGTGACGCGCTGAGCCTAACCTTCGCGGTATCC
ATTCACCAAGGAGCCGCGAG

Downstream 100 bases:

>100_bases
TGGCTCTGGGCGGAGACGTCGATCTGCAGCGAGACATCGGACGCCGGCAAAGCAAAAAGCCGCGAACCCTTGCGGGATCG
CGGCTTTTCAAATAGATGGT

Product: LuxR response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDPIPFDEALIVDARPVPPGEASWQLAHALGARRTLLADNVRQAQQMVRERQPGLVVVELDALGQAGITLIKRLAARHPD
VRLLVLSDSDATMAPVQALRAGAHGFVPRQRDLAEMVQAARGVMSGYLVFPTHTLDAARKLRLPSAGKLARLTARELTVL
QYLARGHSNKTIGARLLISSKTVSTHKTNIMCKLNVGSVVEMVDYARQHRLL

Sequences:

>Translated_212_residues
MDPIPFDEALIVDARPVPPGEASWQLAHALGARRTLLADNVRQAQQMVRERQPGLVVVELDALGQAGITLIKRLAARHPD
VRLLVLSDSDATMAPVQALRAGAHGFVPRQRDLAEMVQAARGVMSGYLVFPTHTLDAARKLRLPSAGKLARLTARELTVL
QYLARGHSNKTIGARLLISSKTVSTHKTNIMCKLNVGSVVEMVDYARQHRLL
>Mature_212_residues
MDPIPFDEALIVDARPVPPGEASWQLAHALGARRTLLADNVRQAQQMVRERQPGLVVVELDALGQAGITLIKRLAARHPD
VRLLVLSDSDATMAPVQALRAGAHGFVPRQRDLAEMVQAARGVMSGYLVFPTHTLDAARKLRLPSAGKLARLTARELTVL
QYLARGHSNKTIGARLLISSKTVSTHKTNIMCKLNVGSVVEMVDYARQHRLL

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786747, Length=205, Percent_Identity=33.1707317073171, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1788712, Length=214, Percent_Identity=26.1682242990654, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1788521, Length=148, Percent_Identity=31.7567567567568, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1788222, Length=174, Percent_Identity=25.2873563218391, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23169; Mature: 23169

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPIPFDEALIVDARPVPPGEASWQLAHALGARRTLLADNVRQAQQMVRERQPGLVVVEL
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DALGQAGITLIKRLAARHPDVRLLVLSDSDATMAPVQALRAGAHGFVPRQRDLAEMVQAA
CCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RGVMSGYLVFPTHTLDAARKLRLPSAGKLARLTARELTVLQYLARGHSNKTIGARLLISS
HHHHCCEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
KTVSTHKTNIMCKLNVGSVVEMVDYARQHRLL
CCCCCCCCEEEEEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDPIPFDEALIVDARPVPPGEASWQLAHALGARRTLLADNVRQAQQMVRERQPGLVVVEL
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DALGQAGITLIKRLAARHPDVRLLVLSDSDATMAPVQALRAGAHGFVPRQRDLAEMVQAA
CCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RGVMSGYLVFPTHTLDAARKLRLPSAGKLARLTARELTVLQYLARGHSNKTIGARLLISS
HHHHCCEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
KTVSTHKTNIMCKLNVGSVVEMVDYARQHRLL
CCCCCCCCEEEEEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1360005; 11677609 [H]