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The map label for this gene is ydbC [H]

Identifier: 73539716

GI number: 73539716

Start: 13518

End: 14420

Strand: Reverse

Name: ydbC [H]

Synonym: Reut_A0010

Alternate gene names: 73539716

Gene position: 14420-13518 (Counterclockwise)

Preceding gene: 73539725

Following gene: 73539714

Centisome position: 0.38

GC content: 64.78

Gene sequence:

>903_bases
ATGTCCCCCACGCACCAACCTCGTCGTCCCGCCACCACCTACACCCTTGCCGGCCGCACCGTGAACCGCATGGGCTACGG
CGCCATGCAGCTCGCCGGGCCCGGCGTGTTCGGCCCGCCGAAGGATCGTGACGCGGCGATCGCCGTGCTGCGCGAAGCCG
TCGCGTCCGGCGTCAACCACATCGATACGAGTGATTTCTACGGCCCGCACATCACCAACCAGCTCATCCGCGAAGCCCTC
TATCCTTACCCCGATGACCTGGTGATCGTCACCAAGGTAGGCGCCCGCCGCGGCGAAGACGCCTCGTGGCTGCCGGCGCT
TGAGCCGGAGGCCGTCCGGCAAGCGGTCCATGACAACCTGCGCAATCTGGGTGTGGAGGTGCTGGATGTCGTCAACCTGC
GGCTCATGGGGGATATCCATGCGCCGACGGAAGGCTCGATCGAAAGGGAGGTCACTGCGCTGGCCGAGCTGCAAAGGCAG
GGGCTGGTTCGCCACATCGGGCTGAGCAACGTGACGTCGGCGCAGGTAGCGCAGGCGCGGAAGATTGCGCCGGTTGTCTG
TGTGCAGAACCAGTACAACCTGGTGCAGCGTGGCGATGATGCGCTGGTGGATGAACTGGCGGAGAAGGGGATTGCGTACG
TGCCGTTCTTTCCGCTTGGCGGGTTCACGCCGATTCAGTCGGCGGGGTTGTCAAAGGTGGCGGAAGGGATCGGGGCGACG
GCGATGCAGGTGGCGCTGGCCTGGTTGCTGCATCGGGCGCCGAATGTGTTGTTGATTCCGGGGACTTCGTCGGTGGGGCA
TTTGAGGGAGAACTTGAGGGCGGGGGAGATTGTGTTGACGGATGCTGTGCTTGCGGAGCTGGATGCGATTGGACGAGCGA
CGCATGAGCATGCGGTTGCGTGA

Upstream 100 bases:

>100_bases
ATTTGAAACAGCCCATTCAATCTAGGCCGGATTATCAAACACTGCAACGCCAAACATACTGGCGCCACCTGTTCAGCCAA
ACCGAATCAAGGAGAACGCC

Downstream 100 bases:

>100_bases
GTTCGTTGCAGCGATCTGCGACTGGATCTTGAGGGAATACTGAAGCTTCAGTTTGCAGCACTAATCCGGTGTCAGTACCA
GAACGGCGCGAGGCCAGTTG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSPTHQPRRPATTYTLAGRTVNRMGYGAMQLAGPGVFGPPKDRDAAIAVLREAVASGVNHIDTSDFYGPHITNQLIREAL
YPYPDDLVIVTKVGARRGEDASWLPALEPEAVRQAVHDNLRNLGVEVLDVVNLRLMGDIHAPTEGSIEREVTALAELQRQ
GLVRHIGLSNVTSAQVAQARKIAPVVCVQNQYNLVQRGDDALVDELAEKGIAYVPFFPLGGFTPIQSAGLSKVAEGIGAT
AMQVALAWLLHRAPNVLLIPGTSSVGHLRENLRAGEIVLTDAVLAELDAIGRATHEHAVA

Sequences:

>Translated_300_residues
MSPTHQPRRPATTYTLAGRTVNRMGYGAMQLAGPGVFGPPKDRDAAIAVLREAVASGVNHIDTSDFYGPHITNQLIREAL
YPYPDDLVIVTKVGARRGEDASWLPALEPEAVRQAVHDNLRNLGVEVLDVVNLRLMGDIHAPTEGSIEREVTALAELQRQ
GLVRHIGLSNVTSAQVAQARKIAPVVCVQNQYNLVQRGDDALVDELAEKGIAYVPFFPLGGFTPIQSAGLSKVAEGIGAT
AMQVALAWLLHRAPNVLLIPGTSSVGHLRENLRAGEIVLTDAVLAELDAIGRATHEHAVA
>Mature_299_residues
SPTHQPRRPATTYTLAGRTVNRMGYGAMQLAGPGVFGPPKDRDAAIAVLREAVASGVNHIDTSDFYGPHITNQLIREALY
PYPDDLVIVTKVGARRGEDASWLPALEPEAVRQAVHDNLRNLGVEVLDVVNLRLMGDIHAPTEGSIEREVTALAELQRQG
LVRHIGLSNVTSAQVAQARKIAPVVCVQNQYNLVQRGDDALVDELAEKGIAYVPFFPLGGFTPIQSAGLSKVAEGIGATA
MQVALAWLLHRAPNVLLIPGTSSVGHLRENLRAGEIVLTDAVLAELDAIGRATHEHAVA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=283, Percent_Identity=71.7314487632509, Blast_Score=432, Evalue=1e-122,
Organism=Escherichia coli, GI87081735, Length=319, Percent_Identity=27.8996865203762, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788070, Length=303, Percent_Identity=25.0825082508251, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789199, Length=332, Percent_Identity=26.5060240963855, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788081, Length=278, Percent_Identity=24.8201438848921, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789375, Length=306, Percent_Identity=24.8366013071895, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32133; Mature: 32002

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTHQPRRPATTYTLAGRTVNRMGYGAMQLAGPGVFGPPKDRDAAIAVLREAVASGVNH
CCCCCCCCCCCCEEEECCCHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
IDTSDFYGPHITNQLIREALYPYPDDLVIVTKVGARRGEDASWLPALEPEAVRQAVHDNL
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
RNLGVEVLDVVNLRLMGDIHAPTEGSIEREVTALAELQRQGLVRHIGLSNVTSAQVAQAR
HHCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KIAPVVCVQNQYNLVQRGDDALVDELAEKGIAYVPFFPLGGFTPIQSAGLSKVAEGIGAT
HCCCEEEECCCCHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHH
AMQVALAWLLHRAPNVLLIPGTSSVGHLRENLRAGEIVLTDAVLAELDAIGRATHEHAVA
HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPTHQPRRPATTYTLAGRTVNRMGYGAMQLAGPGVFGPPKDRDAAIAVLREAVASGVNH
CCCCCCCCCCCEEEECCCHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
IDTSDFYGPHITNQLIREALYPYPDDLVIVTKVGARRGEDASWLPALEPEAVRQAVHDNL
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
RNLGVEVLDVVNLRLMGDIHAPTEGSIEREVTALAELQRQGLVRHIGLSNVTSAQVAQAR
HHCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KIAPVVCVQNQYNLVQRGDDALVDELAEKGIAYVPFFPLGGFTPIQSAGLSKVAEGIGAT
HCCCEEEECCCCHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHH
AMQVALAWLLHRAPNVLLIPGTSSVGHLRENLRAGEIVLTDAVLAELDAIGRATHEHAVA
HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]