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The map label for this gene is omp32 [H]

Identifier: 73539670

GI number: 73539670

Start: 2688575

End: 2689675

Strand: Reverse

Name: omp32 [H]

Synonym: Reut_B5850

Alternate gene names: 73539670

Gene position: 2689675-2688575 (Counterclockwise)

Preceding gene: 73539671

Following gene: 73539669

Centisome position: 98.66

GC content: 64.21

Gene sequence:

>1101_bases
ATGAAACGCGTTCCCATGCGAAGCGCTGTCCTGACCCTGGCCGCATGCTGCATAGCCGGCGAGGCCGCGGCGCAATCGTC
GGTCACGGTGTATGGCCGCATCAACACGGCGCTCGAATACTCCAGCGCCAGCACGGCAACGGACGGCACGCATCTTGGCG
GCACGGGCCGGCTGACCAACAACCGCTCGGTGTTCGGCCTGCGCGGAGAAGAGGATCTCGGCGGCACGCTCAAGGCCATC
TGGCAGATCGAAAGTAATGTCTCGCTCGATACAGGCCAGGGCCAGATTGCCGGGCGCAATGACCGCATCGGGCTGCAGGG
CAAGGCCGGTACCTTCTTCATGGGCCACTGGCAGACACCGTACACCGTGTCGACGATGGGCTATGACCCGTATTACCCGA
CCACCGCCGGCTACATGGCGCTGATCGGCAACGGCTCGGCGTCCAGCTCCGACAACGTGCAGGACACCAGCTCGTTCGAC
CGCCGGCAGAAGAACATCATCGTCTACCAGACGCCATCGTTTGCTGGCTTCAGCGGCTCGGCGGCGTGGGGCATCAACGA
GGAAAAGCTGACGGTGCCGCGCAACCCGGGCCTGTACTCGTTCTCTGCCGCGTACGACAACGGCCCGCTCAATGTCGCGC
TCGCCTACGAAATCCACCAGAACTACCAAGTCAAGGGCCGCAACGACGATGCCATGAAGGCCGGGGTGTCGTACCGGTTC
CCCAGCACGACCGTCGCCCTGCTGTACGAACGCCTGCATTACCGCACCGCGACCGGCGATCTCACGCGCAACGGGTACTA
CGCATCGCTCGTGCAGAAGCTCGGGCCGGGCAGCGTGAAGCTGGGCTTTGCGCTGGCCAGCAACGGCACCGGCAACGCGA
CCGAAACCGTCGGCTTCTTCCGCAGCGGCGCGGATACCGGCGCCACGCAGGTGACCATCGGCTACGACTACCCGCTGTCC
AAGCGCACGACGCTGTTCGCGTACTACAGCCGCATCGATAACAAGAAAAACGCGATCTACGACTTCGCCATCAACGAACT
TGGCGTGAGCGCAGGCGCCGACCCGCAGACCTTCGCGCTCGGCATGCGCCACTTCTTCTGA

Upstream 100 bases:

>100_bases
AAGCAGTATCCGGCGCCCCGGCATGGCGCCGTGCCCGCGCATCGGTGCGGGCGCCACTTCCACAACAAGCACACAGAAAC
ACAGAAGCGGGAGACTACCC

Downstream 100 bases:

>100_bases
ATTCACCGGTTGTGAGGAGACAAACGATGTATCGCCCCCTTCGTCGCAAGACTCTGTTCACCCTGTCCGCCGCCGCACTC
GCCGTGCTGGCCGCTGCTCC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKRVPMRSAVLTLAACCIAGEAAAQSSVTVYGRINTALEYSSASTATDGTHLGGTGRLTNNRSVFGLRGEEDLGGTLKAI
WQIESNVSLDTGQGQIAGRNDRIGLQGKAGTFFMGHWQTPYTVSTMGYDPYYPTTAGYMALIGNGSASSSDNVQDTSSFD
RRQKNIIVYQTPSFAGFSGSAAWGINEEKLTVPRNPGLYSFSAAYDNGPLNVALAYEIHQNYQVKGRNDDAMKAGVSYRF
PSTTVALLYERLHYRTATGDLTRNGYYASLVQKLGPGSVKLGFALASNGTGNATETVGFFRSGADTGATQVTIGYDYPLS
KRTTLFAYYSRIDNKKNAIYDFAINELGVSAGADPQTFALGMRHFF

Sequences:

>Translated_366_residues
MKRVPMRSAVLTLAACCIAGEAAAQSSVTVYGRINTALEYSSASTATDGTHLGGTGRLTNNRSVFGLRGEEDLGGTLKAI
WQIESNVSLDTGQGQIAGRNDRIGLQGKAGTFFMGHWQTPYTVSTMGYDPYYPTTAGYMALIGNGSASSSDNVQDTSSFD
RRQKNIIVYQTPSFAGFSGSAAWGINEEKLTVPRNPGLYSFSAAYDNGPLNVALAYEIHQNYQVKGRNDDAMKAGVSYRF
PSTTVALLYERLHYRTATGDLTRNGYYASLVQKLGPGSVKLGFALASNGTGNATETVGFFRSGADTGATQVTIGYDYPLS
KRTTLFAYYSRIDNKKNAIYDFAINELGVSAGADPQTFALGMRHFF
>Mature_366_residues
MKRVPMRSAVLTLAACCIAGEAAAQSSVTVYGRINTALEYSSASTATDGTHLGGTGRLTNNRSVFGLRGEEDLGGTLKAI
WQIESNVSLDTGQGQIAGRNDRIGLQGKAGTFFMGHWQTPYTVSTMGYDPYYPTTAGYMALIGNGSASSSDNVQDTSSFD
RRQKNIIVYQTPSFAGFSGSAAWGINEEKLTVPRNPGLYSFSAAYDNGPLNVALAYEIHQNYQVKGRNDDAMKAGVSYRF
PSTTVALLYERLHYRTATGDLTRNGYYASLVQKLGPGSVKLGFALASNGTGNATETVGFFRSGADTGATQVTIGYDYPLS
KRTTLFAYYSRIDNKKNAIYDFAINELGVSAGADPQTFALGMRHFF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39365; Mature: 39365

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVPMRSAVLTLAACCIAGEAAAQSSVTVYGRINTALEYSSASTATDGTHLGGTGRLTN
CCCCCHHHHHHHHHHHHHCCCHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEECC
NRSVFGLRGEEDLGGTLKAIWQIESNVSLDTGQGQIAGRNDRIGLQGKAGTFFMGHWQTP
CCEEEEECCCCCCCCCEEEEEEECCCCEEECCCCEECCCCCCEEEECCCCEEEEECCCCC
YTVSTMGYDPYYPTTAGYMALIGNGSASSSDNVQDTSSFDRRQKNIIVYQTPSFAGFSGS
EEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCC
AAWGINEEKLTVPRNPGLYSFSAAYDNGPLNVALAYEIHQNYQVKGRNDDAMKAGVSYRF
EEECCCCCEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCEEEECCCCHHHHCCEEEEC
PSTTVALLYERLHYRTATGDLTRNGYYASLVQKLGPGSVKLGFALASNGTGNATETVGFF
CCHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHH
RSGADTGATQVTIGYDYPLSKRTTLFAYYSRIDNKKNAIYDFAINELGVSAGADPQTFAL
HCCCCCCCEEEEEEECCCCCCCEEEEEEEHHCCCCCCEEEEEEHHHHCCCCCCCHHHHHH
GMRHFF
HHHHCC
>Mature Secondary Structure
MKRVPMRSAVLTLAACCIAGEAAAQSSVTVYGRINTALEYSSASTATDGTHLGGTGRLTN
CCCCCHHHHHHHHHHHHHCCCHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEECC
NRSVFGLRGEEDLGGTLKAIWQIESNVSLDTGQGQIAGRNDRIGLQGKAGTFFMGHWQTP
CCEEEEECCCCCCCCCEEEEEEECCCCEEECCCCEECCCCCCEEEECCCCEEEEECCCCC
YTVSTMGYDPYYPTTAGYMALIGNGSASSSDNVQDTSSFDRRQKNIIVYQTPSFAGFSGS
EEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCC
AAWGINEEKLTVPRNPGLYSFSAAYDNGPLNVALAYEIHQNYQVKGRNDDAMKAGVSYRF
EEECCCCCEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCEEEECCCCHHHHCCEEEEC
PSTTVALLYERLHYRTATGDLTRNGYYASLVQKLGPGSVKLGFALASNGTGNATETVGFF
CCHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHH
RSGADTGATQVTIGYDYPLSKRTTLFAYYSRIDNKKNAIYDFAINELGVSAGADPQTFAL
HCCCCCCCEEEEEEECCCCCCCEEEEEEEHHCCCCCCEEEEEEHHHHCCCCCCCHHHHHH
GMRHFF
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]