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The map label for this gene is gapB [H]

Identifier: 73538820

GI number: 73538820

Start: 1722824

End: 1723816

Strand: Direct

Name: gapB [H]

Synonym: Reut_B4995

Alternate gene names: 73538820

Gene position: 1722824-1723816 (Clockwise)

Preceding gene: 73538819

Following gene: 73538823

Centisome position: 63.2

GC content: 66.97

Gene sequence:

>993_bases
ATGGCCCGACGTTCCCCCACCGCCGTGTTGCACGGGCTGGGCCGCTTCGGCCTGCACTGGCTGCGCGCATGGTTGGATCG
CCCGGATTGCGGCGTGCAGCTCATGGCCATCCAGGATGCGCACCACAGTCTGGCGTGCGCACTGCGGATGCTGCAGGAGG
AAACCAAGCCTTCTTTTGCCGATTGCGCGATCCGCGCGGAAGACGACTGCCTGTGCATCCTCAAACGCGGCCGCAAAGCG
CTGCGCATCCCTTACTGGCACGGGCCGGCCATGACGTCTCCGTGGCTGGGGCAGGCAGACTGGTGGCTCGAATGTTCGGG
CGAATTCTCCAGCGGTGTAGCGAGCCGGCCGTTCCTGCGCGGCCGTACACGCCGAGTGATCGTTTCGGCCACATGCCCGG
GTGCGGACCAGACGCTGGTGTTCGGCCATAACGACAAGACGTTCGACCACGCGTCCGGCGTCATCTCGTATGGCTCATGC
ACCGTCAACGCCTTCGTGCCGCTGGCAGCCTGGCTGCATGCGAAGTATGGCGTGGTCGATGCCGAGGTCGGCGTCATCCA
TAACGTGCCCGCGTACAAGCTGTCCACGCATGCGCACCCGCAGCGGCGCGCCTGCACGCTCGAAACCGAAGGGCCCGGGC
TGCTGCCGTTCCTGTTGCCCGAGCGATTCCGCGTGGACTACGTGCTGATTCCCTATACAGGGGTCTCGCTGATCGACTTC
CGCTTCGACCTGGCGCGCGCCGTGGATGAGGCGCCATTGCTTGACGCGCTGGAACACGCGTGCGTAGCGGGCCCGCTGCA
GGGCCTCTATGCGCTCGACGTCCGCGACGCGGCGCCGCCAGCGTATGCCATGCGCGCGGAATCCGCGGTGCTGTTGCGCC
AGCGCGCGCGCCTGCGCGGCGGCAGGCTGGTGCTCCCGGCCTGCTTCGACAACGAGAACTCGGCAACGCGCTATCTGGAC
CTGCTGGAAAGCCTTGTCCTGCGGGGCGCTTAA

Upstream 100 bases:

>100_bases
CGCGGCCATGGGAATCGGCCTGAGCTGGACGCCGCGCTCGAACGAAGTGTCGACGACGGCGCTGCGCGAACGCATTCTCG
CCAGCCTGCAGCCGTAACCC

Downstream 100 bases:

>100_bases
GCGCTTGCCGCACCGCCGGGGAGTGATGCCAGGCCAGCTTTCAATACCTGCTCGACACGGCGCAACAGCGCGTCATCAGG
GGTGTGCCGGTCCAACACCA

Product: glyceraldehyde 3-phosphate dehydrogenase

Products: NA

Alternate protein names: GAPDH [H]

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MARRSPTAVLHGLGRFGLHWLRAWLDRPDCGVQLMAIQDAHHSLACALRMLQEETKPSFADCAIRAEDDCLCILKRGRKA
LRIPYWHGPAMTSPWLGQADWWLECSGEFSSGVASRPFLRGRTRRVIVSATCPGADQTLVFGHNDKTFDHASGVISYGSC
TVNAFVPLAAWLHAKYGVVDAEVGVIHNVPAYKLSTHAHPQRRACTLETEGPGLLPFLLPERFRVDYVLIPYTGVSLIDF
RFDLARAVDEAPLLDALEHACVAGPLQGLYALDVRDAAPPAYAMRAESAVLLRQRARLRGGRLVLPACFDNENSATRYLD
LLESLVLRGA

Sequences:

>Translated_330_residues
MARRSPTAVLHGLGRFGLHWLRAWLDRPDCGVQLMAIQDAHHSLACALRMLQEETKPSFADCAIRAEDDCLCILKRGRKA
LRIPYWHGPAMTSPWLGQADWWLECSGEFSSGVASRPFLRGRTRRVIVSATCPGADQTLVFGHNDKTFDHASGVISYGSC
TVNAFVPLAAWLHAKYGVVDAEVGVIHNVPAYKLSTHAHPQRRACTLETEGPGLLPFLLPERFRVDYVLIPYTGVSLIDF
RFDLARAVDEAPLLDALEHACVAGPLQGLYALDVRDAAPPAYAMRAESAVLLRQRARLRGGRLVLPACFDNENSATRYLD
LLESLVLRGA
>Mature_329_residues
ARRSPTAVLHGLGRFGLHWLRAWLDRPDCGVQLMAIQDAHHSLACALRMLQEETKPSFADCAIRAEDDCLCILKRGRKAL
RIPYWHGPAMTSPWLGQADWWLECSGEFSSGVASRPFLRGRTRRVIVSATCPGADQTLVFGHNDKTFDHASGVISYGSCT
VNAFVPLAAWLHAKYGVVDAEVGVIHNVPAYKLSTHAHPQRRACTLETEGPGLLPFLLPERFRVDYVLIPYTGVSLIDFR
FDLARAVDEAPLLDALEHACVAGPLQGLYALDVRDAAPPAYAMRAESAVLLRQRARLRGGRLVLPACFDNENSATRYLDL
LESLVLRGA

Specific function: Second phase of glycolysis; first step. [C]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17568413, Length=349, Percent_Identity=23.2091690544413, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32566163, Length=349, Percent_Identity=23.2091690544413, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17534679, Length=346, Percent_Identity=22.8323699421965, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17534677, Length=346, Percent_Identity=22.5433526011561, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.12 [H]

Molecular weight: Translated: 36408; Mature: 36277

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRSPTAVLHGLGRFGLHWLRAWLDRPDCGVQLMAIQDAHHSLACALRMLQEETKPSFA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHH
DCAIRAEDDCLCILKRGRKALRIPYWHGPAMTSPWLGQADWWLECSGEFSSGVASRPFLR
HEEEECCCCCHHEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
GRTRRVIVSATCPGADQTLVFGHNDKTFDHASGVISYGSCTVNAFVPLAAWLHAKYGVVD
CCCEEEEEEEECCCCCCEEEECCCCCCCHHHCCEEEECCEEEHHHHHHHHHHHHHCCEEE
AEVGVIHNVPAYKLSTHAHPQRRACTLETEGPGLLPFLLPERFRVDYVLIPYTGVSLIDF
CCCCEEECCCCEEEECCCCCCCCEEEEECCCCCEEHHHCCCCCCCCEEEECCCCCEEEHH
RFDLARAVDEAPLLDALEHACVAGPLQGLYALDVRDAAPPAYAMRAESAVLLRQRARLRG
HHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
GRLVLPACFDNENSATRYLDLLESLVLRGA
CEEEEEEEECCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARRSPTAVLHGLGRFGLHWLRAWLDRPDCGVQLMAIQDAHHSLACALRMLQEETKPSFA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHH
DCAIRAEDDCLCILKRGRKALRIPYWHGPAMTSPWLGQADWWLECSGEFSSGVASRPFLR
HEEEECCCCCHHEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
GRTRRVIVSATCPGADQTLVFGHNDKTFDHASGVISYGSCTVNAFVPLAAWLHAKYGVVD
CCCEEEEEEEECCCCCCEEEECCCCCCCHHHCCEEEECCEEEHHHHHHHHHHHHHCCEEE
AEVGVIHNVPAYKLSTHAHPQRRACTLETEGPGLLPFLLPERFRVDYVLIPYTGVSLIDF
CCCCEEECCCCEEEECCCCCCCCEEEEECCCCCEEHHHCCCCCCCCEEEECCCCCEEEHH
RFDLARAVDEAPLLDALEHACVAGPLQGLYALDVRDAAPPAYAMRAESAVLLRQRARLRG
HHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
GRLVLPACFDNENSATRYLDLLESLVLRGA
CEEEEEEEECCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1939098 [H]