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The map label for this gene is 73538778

Identifier: 73538778

GI number: 73538778

Start: 1680526

End: 1681431

Strand: Direct

Name: 73538778

Synonym: Reut_B4953

Alternate gene names: NA

Gene position: 1680526-1681431 (Clockwise)

Preceding gene: 73538777

Following gene: 73538779

Centisome position: 61.64

GC content: 68.87

Gene sequence:

>906_bases
ATGCCGCACGACGGCAAAAAAAGCGTGTCGAGGAGTTACGTGGCCGGTACTCAAATCGCAACGCCAGACGCCCCCATCGC
CGGTGCGGCCACGCAGGCCGTATCCTCGGGCAGTTCATTTCACGCGGCCATGCGCATCCTGCCAGCAGCGCAGCGGCAGG
CCATGTTCGAGATCTACGCGTTCTGCCGCGCCGTTGACGACATTGCAGACTGCGACGCGCCGCATGCCGAGCGCCTGGCC
GGCCTGGACGCATGGCGACGTGACATCGGCCTGTGCTACGCGGGCATGGCCCCAAGCGCGCTGCGGCCGCTGGCGCAACA
GATCGAAGCCTTCCACCTGCGCCAGCAGGATTTCCTCGACGTGATCGACGGCATGACCATGGACGTGGTCGCCGATATCC
GCGCGCCCGATGCCGACACGCTGGACCTGTACTGCGACCGTGTCGCGAGCGCGGTGGGCCGTCTCGCCGTTCGTGTGTTC
GGCATGGATGAAGCGCCTGGCCTCGCGCTGGCCCATCATCTCGGGCGTGCGCTGCAGCTCACCAACATCCTGCGCGATAT
CGACGAAGACGCCGCCATCGGCCGCCTCTACCTGCCTGCGCCCGCGCTGGCCGCCGCGGGCGTACAAGGGCTGGAGCACG
CCACGCCAATGGAAGTCATCGCGCATGCCGGTATCGACGCCGCGTGCGCGGCCGTCGCGCGTGAAGCGCAGGCGCACTAC
GAACAGGCCGACGCGGTGATGGCGCGCTGCCCGTCGCGCGTGGTGCGCTCCCCGCGCATCATGTCGCAGGTCTACCACTG
CCTGCTCGTGCGCCTGCGTGCGCGGGGCTGGCGCGCGCCGCGCGCACGCGTGCGTGTGCCGCGTGCGCAGTTGCTGTGGA
TCGTCCTGCGGCACACCATGGTTTGA

Upstream 100 bases:

>100_bases
CCCGATAGAGCGCTCTAGCCCGGCGGCGTGTTACGAGGTTGTTGCTATAATCGGCCGACCCCAATCCACCGTCAGCGTGG
CACGGCACAGTGGTCCGCCG

Downstream 100 bases:

>100_bases
GGATGTTGCAAAAGGATCCGCCTTGTGGCGCGACGCGTCCGGGGGTGTCCTGAACATCATCATCGAGGCACGCAAGCGTC
GTGCCGCACAAGGAGTTTGA

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPHDGKKSVSRSYVAGTQIATPDAPIAGAATQAVSSGSSFHAAMRILPAAQRQAMFEIYAFCRAVDDIADCDAPHAERLA
GLDAWRRDIGLCYAGMAPSALRPLAQQIEAFHLRQQDFLDVIDGMTMDVVADIRAPDADTLDLYCDRVASAVGRLAVRVF
GMDEAPGLALAHHLGRALQLTNILRDIDEDAAIGRLYLPAPALAAAGVQGLEHATPMEVIAHAGIDAACAAVAREAQAHY
EQADAVMARCPSRVVRSPRIMSQVYHCLLVRLRARGWRAPRARVRVPRAQLLWIVLRHTMV

Sequences:

>Translated_301_residues
MPHDGKKSVSRSYVAGTQIATPDAPIAGAATQAVSSGSSFHAAMRILPAAQRQAMFEIYAFCRAVDDIADCDAPHAERLA
GLDAWRRDIGLCYAGMAPSALRPLAQQIEAFHLRQQDFLDVIDGMTMDVVADIRAPDADTLDLYCDRVASAVGRLAVRVF
GMDEAPGLALAHHLGRALQLTNILRDIDEDAAIGRLYLPAPALAAAGVQGLEHATPMEVIAHAGIDAACAAVAREAQAHY
EQADAVMARCPSRVVRSPRIMSQVYHCLLVRLRARGWRAPRARVRVPRAQLLWIVLRHTMV
>Mature_300_residues
PHDGKKSVSRSYVAGTQIATPDAPIAGAATQAVSSGSSFHAAMRILPAAQRQAMFEIYAFCRAVDDIADCDAPHAERLAG
LDAWRRDIGLCYAGMAPSALRPLAQQIEAFHLRQQDFLDVIDGMTMDVVADIRAPDADTLDLYCDRVASAVGRLAVRVFG
MDEAPGLALAHHLGRALQLTNILRDIDEDAAIGRLYLPAPALAAAGVQGLEHATPMEVIAHAGIDAACAAVAREAQAHYE
QADAVMARCPSRVVRSPRIMSQVYHCLLVRLRARGWRAPRARVRVPRAQLLWIVLRHTMV

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017828
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 32581; Mature: 32450

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHDGKKSVSRSYVAGTQIATPDAPIAGAATQAVSSGSSFHAAMRILPAAQRQAMFEIYA
CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FCRAVDDIADCDAPHAERLAGLDAWRRDIGLCYAGMAPSALRPLAQQIEAFHLRQQDFLD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VIDGMTMDVVADIRAPDADTLDLYCDRVASAVGRLAVRVFGMDEAPGLALAHHLGRALQL
HHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TNILRDIDEDAAIGRLYLPAPALAAAGVQGLEHATPMEVIAHAGIDAACAAVAREAQAHY
HHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
EQADAVMARCPSRVVRSPRIMSQVYHCLLVRLRARGWRAPRARVRVPRAQLLWIVLRHTM
HHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHC
V
C
>Mature Secondary Structure 
PHDGKKSVSRSYVAGTQIATPDAPIAGAATQAVSSGSSFHAAMRILPAAQRQAMFEIYA
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FCRAVDDIADCDAPHAERLAGLDAWRRDIGLCYAGMAPSALRPLAQQIEAFHLRQQDFLD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VIDGMTMDVVADIRAPDADTLDLYCDRVASAVGRLAVRVFGMDEAPGLALAHHLGRALQL
HHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TNILRDIDEDAAIGRLYLPAPALAAAGVQGLEHATPMEVIAHAGIDAACAAVAREAQAHY
HHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
EQADAVMARCPSRVVRSPRIMSQVYHCLLVRLRARGWRAPRARVRVPRAQLLWIVLRHTM
HHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]