| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is 73538724
Identifier: 73538724
GI number: 73538724
Start: 1623010
End: 1624170
Strand: Direct
Name: 73538724
Synonym: Reut_B4899
Alternate gene names: NA
Gene position: 1623010-1624170 (Clockwise)
Preceding gene: 73538723
Following gene: 73538725
Centisome position: 59.53
GC content: 65.03
Gene sequence:
>1161_bases TTGCCTATCCCGTTCCTGCAGGTCGCCCGCGTGGGCGCCTACATTGTCGGCAAGCATCTGGCGCGCCAGAAGCGCTATCC GCTTGCGCTCATGCTGGAGCCGTTGTTTCGCTGCAACCTTGCCTGCAATGGCTGCGGCAAGATCGACTACCCGGATCCGA TCCTGAACCAGCGCCTGTCGGTCGAGGAATGCCTGGGCGCGGTCGACGAATGCGGCGCGCCCGTGGTATCGATCGCCGGC GGCGAGCCGCTGCTGCACAAGGACATGCCCGAAATCGTGCGCGGCATCATCGCGCGTCGCAAGTTCGTCTACCTGTGCAC CAACGCGCTGCTGATGGAGAAAAAGCTGGACCAGTACGAGCCCAGCCCCTACTTCGTCTGGTCCGTGCACCTGGACGGCG ACCGCGAAATGCATGACCACTCGGTCAGCCAGGAAGGCGTCTATGATCGCGCAGTCGAAGCCATCCGTGCCGCCAAGGCG CGCGGCTTCCGCGTCAATATCAATTGCACGCTGTTCAACGATGCGAAGCCCGACCGCGTGGCCAGCTTCTTCGACACAGT CAAGGAAATGGGCGTCGACGGCATCACCGTCTCGCCCGGCTACGCGTACGAGCGCGCGCCGGACCAGCAGCACTTCCTGA ACCGCGGCAAGACCAAGCAGCTGTTCCGCGACATCCTGAGCCGCGGCCGCGGCAAGAAGTGGTCGTTCAGCCAGTCGACC ATGTTCCTGGACTTCCTGGCCGGCAACCAGACCTACCACTGCACGCCGTGGGGCAACCCGGCGCGCACGGTGTTCGGCTG GCAGCGGCCTTGCTATCTGGTCGGCGAAGGTTATGTGCAGACCTTCAAGGAGCTGATGGACGAGACCGACTGGGACGCCT ACGGCACCGGCAACTACGAGAAGTGCGCCGATTGCATGGTCCACAGCGGCTACGAGGCCACCGCGGTCGCCGATACGTTC GCACATCCGCTCAAGGCGCTCGGCGTGAGCCTGCGCGGCGTGAAGACCGACGGCGCAATGGCCCCGGACATCCCGCTCGA CAACCAGCGCCCCGCCGATTACGTATTCTCGCGCCACGTCGAGATCAAGCTGGCCGAGATCGGCCGGGCCCAGCCGCGCA AGGAACGGCCGGCCCGGGCAGAGACCTCCGAAGCCCACTAA
Upstream 100 bases:
>100_bases TTCCGCCTGCCCGCCGAACTGGCCGATGTCCGGCCTGCCGCAGCCGCGACCGAGCCAGTCGAGAAAGTCCCCGGCTGAAC CAGAATAAAAGGAAGTCCCC
Downstream 100 bases:
>100_bases ATCTTCATGCCCGCGGAAGCAGCGGCCATGGCCGCGACCCTGCTTGGCAGTGCGCTGACCTGCGTGTCGGCGGGCTATGC CGTGGCTGCCGCCGTGCTGA
Product: radical SAM family protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Radical SAM Domain Protein; Molybdenum Cofactor Biosynthesis Protein A; MoaA/NifB/PqqE Family Protein; Heme Biosynthesis Protein; Fe-S Oxidoreductase; MoaA NifB PqqE Radical SAM Superfamily Protein; Co PQQ Synthesis Protein E; Co PQQ Synthesis Protein; Radical S-Adenosylmethionine Superfamily Protein; Iron-Sulfur Oxidoreductase; MoaA/NifB/PqqE Family Fe-S Oxidoreductase; Radical SAM Oxidoreductase; Heme D1 Biosynthesis Protein; Hopanoid Biosynthesis Associated Radical SAM Protein; Fe-S Oxidoreductase Protein; Radical SAM Protein; Radical SAM Superfamily; Heme D1 Biosynthesis Protein NIRJ; Radical SAM; Radical SAM Family Fe-S Protein
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MPIPFLQVARVGAYIVGKHLARQKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLSVEECLGAVDECGAPVVSIAG GEPLLHKDMPEIVRGIIARRKFVYLCTNALLMEKKLDQYEPSPYFVWSVHLDGDREMHDHSVSQEGVYDRAVEAIRAAKA RGFRVNINCTLFNDAKPDRVASFFDTVKEMGVDGITVSPGYAYERAPDQQHFLNRGKTKQLFRDILSRGRGKKWSFSQST MFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYVQTFKELMDETDWDAYGTGNYEKCADCMVHSGYEATAVADTF AHPLKALGVSLRGVKTDGAMAPDIPLDNQRPADYVFSRHVEIKLAEIGRAQPRKERPARAETSEAH
Sequences:
>Translated_386_residues MPIPFLQVARVGAYIVGKHLARQKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLSVEECLGAVDECGAPVVSIAG GEPLLHKDMPEIVRGIIARRKFVYLCTNALLMEKKLDQYEPSPYFVWSVHLDGDREMHDHSVSQEGVYDRAVEAIRAAKA RGFRVNINCTLFNDAKPDRVASFFDTVKEMGVDGITVSPGYAYERAPDQQHFLNRGKTKQLFRDILSRGRGKKWSFSQST MFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYVQTFKELMDETDWDAYGTGNYEKCADCMVHSGYEATAVADTF AHPLKALGVSLRGVKTDGAMAPDIPLDNQRPADYVFSRHVEIKLAEIGRAQPRKERPARAETSEAH >Mature_385_residues PIPFLQVARVGAYIVGKHLARQKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLSVEECLGAVDECGAPVVSIAGG EPLLHKDMPEIVRGIIARRKFVYLCTNALLMEKKLDQYEPSPYFVWSVHLDGDREMHDHSVSQEGVYDRAVEAIRAAKAR GFRVNINCTLFNDAKPDRVASFFDTVKEMGVDGITVSPGYAYERAPDQQHFLNRGKTKQLFRDILSRGRGKKWSFSQSTM FLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYVQTFKELMDETDWDAYGTGNYEKCADCMVHSGYEATAVADTFA HPLKALGVSLRGVKTDGAMAPDIPLDNQRPADYVFSRHVEIKLAEIGRAQPRKERPARAETSEAH
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43347; Mature: 43216
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPFLQVARVGAYIVGKHLARQKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLS CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCC VEECLGAVDECGAPVVSIAGGEPLLHKDMPEIVRGIIARRKFVYLCTNALLMEKKLDQYE HHHHHHHHHHCCCCEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSPYFVWSVHLDGDREMHDHSVSQEGVYDRAVEAIRAAKARGFRVNINCTLFNDAKPDRV CCCEEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHH ASFFDTVKEMGVDGITVSPGYAYERAPDQQHFLNRGKTKQLFRDILSRGRGKKWSFSQST HHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCE MFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYVQTFKELMDETDWDAYGTGNYE EEEEEECCCCEEEECCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHH KCADCMVHSGYEATAVADTFAHPLKALGVSLRGVKTDGAMAPDIPLDNQRPADYVFSRHV HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCHHHHHHCCE EIKLAEIGRAQPRKERPARAETSEAH EEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIPFLQVARVGAYIVGKHLARQKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLS CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCC VEECLGAVDECGAPVVSIAGGEPLLHKDMPEIVRGIIARRKFVYLCTNALLMEKKLDQYE HHHHHHHHHHCCCCEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSPYFVWSVHLDGDREMHDHSVSQEGVYDRAVEAIRAAKARGFRVNINCTLFNDAKPDRV CCCEEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHH ASFFDTVKEMGVDGITVSPGYAYERAPDQQHFLNRGKTKQLFRDILSRGRGKKWSFSQST HHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCE MFLDFLAGNQTYHCTPWGNPARTVFGWQRPCYLVGEGYVQTFKELMDETDWDAYGTGNYE EEEEEECCCCEEEECCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHH KCADCMVHSGYEATAVADTFAHPLKALGVSLRGVKTDGAMAPDIPLDNQRPADYVFSRHV HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCHHHHHHCCE EIKLAEIGRAQPRKERPARAETSEAH EEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA