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The map label for this gene is sodC2 [H]

Identifier: 73538168

GI number: 73538168

Start: 998388

End: 998930

Strand: Direct

Name: sodC2 [H]

Synonym: Reut_B4338

Alternate gene names: 73538168

Gene position: 998388-998930 (Clockwise)

Preceding gene: 73538167

Following gene: 73538170

Centisome position: 36.62

GC content: 66.85

Gene sequence:

>543_bases
ATGAAACGCACACTTTTCGGCCTGGCGGCCACGGCAGCGGTAGCGATGACCCTGGCGGGCTGTGCCGGCTCGGGGACAAA
CGGGGGCGGCGGCGGTGCCAAGGCCACCGCGACCCTCTCGCCGAAGAGCGGCACTAATACGGGCGGCACGGTCACGTTCA
CGCAGCAGGCCGGCGGCGTAATGATGGTGGCATCGGTCACCGGCCTGCCGCCCAATACCACGCACGGCTTCCACGTGCAC
GAAAAGGGTGACTGCTCGGCGCCCGACGCCATGAGCGCCGGCGGTCATTTCAACCCATCCAGCAAGCCGCATGGGCAGAT
GAGCATGCCTGACCACCACGCCGGCGACATGAACAATCTCACGGCCGACGCCAATGGCAATGCGCGCGCCAGTATCCTGA
TGCCTGACCTCAGTGTGGGCGCCGGACCGAACAGCGTTGTCGGCCGCGCGGTGATCGTGCATAAGGATCCGGACGACTAC
AAGACACAGCCGACCGGCAACGCGGGCGGCCGGATTGCGTGTGGGGTCGTTGCGGCGTCGTAG

Upstream 100 bases:

>100_bases
CGCGTAGGCGCGCCTGTTATTCGCCGCTCAATCCGCGCCACCGGGTAAGCGTCGCATCCTATACTGTTTCTTCCGCAATA
AGGTGAATGGGAGGGTTCCG

Downstream 100 bases:

>100_bases
TGAAGGCGCGTCCGTTCAGTACCCCCCCGAAGACCGCATGCACTCGCTGGCGCAGGTAGTCCCCGGCACTGACCGGCAGA
TACCTGCGCGCCTCGCCCTT

Product: copper/Zinc superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKRTLFGLAATAAVAMTLAGCAGSGTNGGGGGAKATATLSPKSGTNTGGTVTFTQQAGGVMMVASVTGLPPNTTHGFHVH
EKGDCSAPDAMSAGGHFNPSSKPHGQMSMPDHHAGDMNNLTADANGNARASILMPDLSVGAGPNSVVGRAVIVHKDPDDY
KTQPTGNAGGRIACGVVAAS

Sequences:

>Translated_180_residues
MKRTLFGLAATAAVAMTLAGCAGSGTNGGGGGAKATATLSPKSGTNTGGTVTFTQQAGGVMMVASVTGLPPNTTHGFHVH
EKGDCSAPDAMSAGGHFNPSSKPHGQMSMPDHHAGDMNNLTADANGNARASILMPDLSVGAGPNSVVGRAVIVHKDPDDY
KTQPTGNAGGRIACGVVAAS
>Mature_180_residues
MKRTLFGLAATAAVAMTLAGCAGSGTNGGGGGAKATATLSPKSGTNTGGTVTFTQQAGGVMMVASVTGLPPNTTHGFHVH
EKGDCSAPDAMSAGGHFNPSSKPHGQMSMPDHHAGDMNNLTADANGNARASILMPDLSVGAGPNSVVGRAVIVHKDPDDY
KTQPTGNAGGRIACGVVAAS

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI4507149, Length=137, Percent_Identity=41.6058394160584, Blast_Score=93, Evalue=1e-19,
Organism=Homo sapiens, GI4826665, Length=139, Percent_Identity=36.6906474820144, Blast_Score=80, Evalue=1e-15,
Organism=Escherichia coli, GI1787934, Length=189, Percent_Identity=32.2751322751323, Blast_Score=67, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17554806, Length=139, Percent_Identity=37.410071942446, Blast_Score=93, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71981876, Length=156, Percent_Identity=39.7435897435897, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71981879, Length=156, Percent_Identity=39.7435897435897, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17537871, Length=156, Percent_Identity=39.7435897435897, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6322564, Length=153, Percent_Identity=39.2156862745098, Blast_Score=89, Evalue=6e-19,
Organism=Drosophila melanogaster, GI17136496, Length=137, Percent_Identity=40.1459854014599, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI85725006, Length=186, Percent_Identity=34.4086021505376, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116007680, Length=144, Percent_Identity=39.5833333333333, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI45551081, Length=144, Percent_Identity=39.5833333333333, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24652737, Length=144, Percent_Identity=39.5833333333333, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281363087, Length=114, Percent_Identity=40.3508771929825, Blast_Score=81, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24652342, Length=114, Percent_Identity=40.3508771929825, Blast_Score=81, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 17653; Mature: 17653

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00087 SOD_CU_ZN_1 ; PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLFGLAATAAVAMTLAGCAGSGTNGGGGGAKATATLSPKSGTNTGGTVTFTQQAGGV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCE
MMVASVTGLPPNTTHGFHVHEKGDCSAPDAMSAGGHFNPSSKPHGQMSMPDHHAGDMNNL
EEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TADANGNARASILMPDLSVGAGPNSVVGRAVIVHKDPDDYKTQPTGNAGGRIACGVVAAS
EECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKRTLFGLAATAAVAMTLAGCAGSGTNGGGGGAKATATLSPKSGTNTGGTVTFTQQAGGV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCE
MMVASVTGLPPNTTHGFHVHEKGDCSAPDAMSAGGHFNPSSKPHGQMSMPDHHAGDMNNL
EEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TADANGNARASILMPDLSVGAGPNSVVGRAVIVHKDPDDYKTQPTGNAGGRIACGVVAAS
EECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]