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The map label for this gene is dedA [H]

Identifier: 73537838

GI number: 73537838

Start: 645168

End: 645806

Strand: Direct

Name: dedA [H]

Synonym: Reut_B4005

Alternate gene names: 73537838

Gene position: 645168-645806 (Clockwise)

Preceding gene: 73537837

Following gene: 73537839

Centisome position: 23.67

GC content: 62.91

Gene sequence:

>639_bases
ATGGACTCCATATCTATGTGGCAGCTGTTGCTGCACTTCGACCAGCATCTCGGCGCCGCCATCGCGCACTACGGCCCGCT
GGTCTACGCCATCCTGTTCGCCGTGGTGTTTGCCGAGATCGGCGTGCTGCCTCTGTTTTTCCTGCCGGGCGATCCCTTGC
TGTTCATCTGTGGCGCGTTCTGCGCGTCGGGTTACCTGAGTCTGTGGGTGCTGATGCCGCTGTTGTTCGTGGCGGCGCTG
GGCGGCAGCCTGCTGAACTACGGCGTGGGCCGTGCGATCGGTATGAAAGTGCTGGGCAGGCAATTGCGGTGGATAGACCA
GGCGGCGCTGGAGCGGACGCATCGGTTCTATGCCGAGCACGGCGACGTGACCTTCCTGCTTTCGCCTTTCATCGCGGTGG
TGCGTACCTTTGCGCCGTTCGTGGGTGGCATAGCAGGCATGGGTGCAGCGCGCTTCCTGCTCGCGGCTGCGGCTGGCGCA
TTGCTATGGTCTGTTTCGCTGCCGGTGCTTGGCTACTTCTTCGGAAACGTGCCGCAGGTGCGTGACCACATGGGGGCCAT
TGTGCTGTCGGGGATTGTGATGGGTGTGGGGGCGCTGGTTGTCGCCAATGTCTGGCGCAGATTGAGGGTGGGAAGGTAG

Upstream 100 bases:

>100_bases
TGGGCATCTCCTGCCGCCTGAACCCGCTCAATGCTGCCGGCGTCATGTTGTCCGGCATTTTTATACCCGATGAATTGCAA
GACGCCTGTGCGCGCCGATC

Downstream 100 bases:

>100_bases
CCCTGGCAAATATGCCTTCGCAGCGTATCGAGGCAGGACACCGCCCGATTGCAAAAATCCCTGGCACCCGCAACAATCCA
CCCGATAAAGTGCCGCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDSISMWQLLLHFDQHLGAAIAHYGPLVYAILFAVVFAEIGVLPLFFLPGDPLLFICGAFCASGYLSLWVLMPLLFVAAL
GGSLLNYGVGRAIGMKVLGRQLRWIDQAALERTHRFYAEHGDVTFLLSPFIAVVRTFAPFVGGIAGMGAARFLLAAAAGA
LLWSVSLPVLGYFFGNVPQVRDHMGAIVLSGIVMGVGALVVANVWRRLRVGR

Sequences:

>Translated_212_residues
MDSISMWQLLLHFDQHLGAAIAHYGPLVYAILFAVVFAEIGVLPLFFLPGDPLLFICGAFCASGYLSLWVLMPLLFVAAL
GGSLLNYGVGRAIGMKVLGRQLRWIDQAALERTHRFYAEHGDVTFLLSPFIAVVRTFAPFVGGIAGMGAARFLLAAAAGA
LLWSVSLPVLGYFFGNVPQVRDHMGAIVLSGIVMGVGALVVANVWRRLRVGR
>Mature_212_residues
MDSISMWQLLLHFDQHLGAAIAHYGPLVYAILFAVVFAEIGVLPLFFLPGDPLLFICGAFCASGYLSLWVLMPLLFVAAL
GGSLLNYGVGRAIGMKVLGRQLRWIDQAALERTHRFYAEHGDVTFLLSPFIAVVRTFAPFVGGIAGMGAARFLLAAAAGA
LLWSVSLPVLGYFFGNVPQVRDHMGAIVLSGIVMGVGALVVANVWRRLRVGR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=192, Percent_Identity=38.5416666666667, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1789481, Length=153, Percent_Identity=35.9477124183007, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1789384, Length=177, Percent_Identity=33.8983050847458, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22860; Mature: 22860

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSISMWQLLLHFDQHLGAAIAHYGPLVYAILFAVVFAEIGVLPLFFLPGDPLLFICGAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
CASGYLSLWVLMPLLFVAALGGSLLNYGVGRAIGMKVLGRQLRWIDQAALERTHRFYAEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDVTFLLSPFIAVVRTFAPFVGGIAGMGAARFLLAAAAGALLWSVSLPVLGYFFGNVPQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RDHMGAIVLSGIVMGVGALVVANVWRRLRVGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSISMWQLLLHFDQHLGAAIAHYGPLVYAILFAVVFAEIGVLPLFFLPGDPLLFICGAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
CASGYLSLWVLMPLLFVAALGGSLLNYGVGRAIGMKVLGRQLRWIDQAALERTHRFYAEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDVTFLLSPFIAVVRTFAPFVGGIAGMGAARFLLAAAAGALLWSVSLPVLGYFFGNVPQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RDHMGAIVLSGIVMGVGALVVANVWRRLRVGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]