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The map label for this gene is ydeS [C]

Identifier: 73537558

GI number: 73537558

Start: 312949

End: 314043

Strand: Reverse

Name: ydeS [C]

Synonym: Reut_B3723

Alternate gene names: 73537558

Gene position: 314043-312949 (Counterclockwise)

Preceding gene: 73537562

Following gene: 73537553

Centisome position: 11.52

GC content: 65.02

Gene sequence:

>1095_bases
ATGGAAGCAGCCATTTCAACGTTCGGCGATGTCGGCCGGGCCAGGGGTCGCCTAGAGTGGCGGGTTCTTTCGCGCACGCC
TGCTCTGAAAAATCCCATGATCGACGCTTTGAAAAGCACAGCCCTGCTGACCCTGCTGCCTGCCAGTCTGCTTTGTTCCG
GCCCAGCCCGGGCGGCCTGCACCTCAACACCCGGAATGCCTTACCTGCAGGCCATCGATACCATTGCCGCGGAATCGAAC
CTTGCGGTTGGCGCGACCATCCCCGGCACGGCAAGGCACTACACGCTGACCGGCAAGTGCGACTATGGTGAGCCGTACCA
GGTGCCGGGAGCCGTGATCGTCGCGTGCTACTACGGTTCCGGCAAGGAAGTCATGCCCGGCGTGTATTCCACCGGCGTTT
CCGGCCTGGGGATCCGACTGCGCAACGCCGCGGGCGAGCCCATGCTGAATGCGGCCGGACGCAGCTGCGATACCCGCGGC
GCTTCGCTCGGGACGCTCAACGCGGACATGACCTATTCAGTCTCGGTCTCGACAGAATTCGTCAAGACCGGATCGATTGC
CGCCGGGGCGCTGGACCCGTCCCAGACGCGCTTCGGCTTTGGCGTGTATCACGGAAACGGCCTCGGCGGCACATCTAACT
ACATCGGATTCAGCGGCATGCTGCAGGTCCGCCAGATCGCCTGCAATGCCACGTATCCTGCTGCCGTGCGGCTACCGAGG
GTCAAGGCTTCGACGCTGGCATCGGCCGGTGCCACCGCAGGCGCAACGCCGTTCGCCATCGTGCTGAACTGCAATGGCAC
TGCGCGCGTTGGCGTGAGTTTCGATGCCGCCGGCGGCTCGACCGTCAAGTCGGCACAGGCCGGCGTGCTCGGCCCGGCCA
ACGAAGGCGCGCCCGGCGCCGCCGGCGGCGTCGGCGTGCAACTTACCGATGCGCGCACCAACCCCGTGCCGCTGCAGCAA
AGCAATCCGGTCGGCACCATCGACGCCAATGCACCGGCCACCTACGCCTACGCGTTGAGATACTTCGCACTGGCCCCGCA
TGCGAAGCCTGGCGTGGTCAGTGGCGCAATGACATTCACGTTTGATTACCAGTAG

Upstream 100 bases:

>100_bases
ATCGAATGTATCAACAAGGTGTCACTTTACCATTTCGTGACGATTTCCCGACAGTCAAAACTGCAATGACCGGGGTGAAG
GCGCTGCAGGAATCACTTGA

Downstream 100 bases:

>100_bases
CCCCGCGGGCTTGCCCGCGGGGGTCAGGCAATCAGCAGTTTCGGCCCCGCCTGCCGCAGCGCTTCGGCCAGCGGCGGCTC
GGGTGCCATATCGGTGATCA

Product: fimbrial protein

Products: NA

Alternate protein names: Fimbrial Protein Domain-Containing Protein

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MEAAISTFGDVGRARGRLEWRVLSRTPALKNPMIDALKSTALLTLLPASLLCSGPARAACTSTPGMPYLQAIDTIAAESN
LAVGATIPGTARHYTLTGKCDYGEPYQVPGAVIVACYYGSGKEVMPGVYSTGVSGLGIRLRNAAGEPMLNAAGRSCDTRG
ASLGTLNADMTYSVSVSTEFVKTGSIAAGALDPSQTRFGFGVYHGNGLGGTSNYIGFSGMLQVRQIACNATYPAAVRLPR
VKASTLASAGATAGATPFAIVLNCNGTARVGVSFDAAGGSTVKSAQAGVLGPANEGAPGAAGGVGVQLTDARTNPVPLQQ
SNPVGTIDANAPATYAYALRYFALAPHAKPGVVSGAMTFTFDYQ

Sequences:

>Translated_364_residues
MEAAISTFGDVGRARGRLEWRVLSRTPALKNPMIDALKSTALLTLLPASLLCSGPARAACTSTPGMPYLQAIDTIAAESN
LAVGATIPGTARHYTLTGKCDYGEPYQVPGAVIVACYYGSGKEVMPGVYSTGVSGLGIRLRNAAGEPMLNAAGRSCDTRG
ASLGTLNADMTYSVSVSTEFVKTGSIAAGALDPSQTRFGFGVYHGNGLGGTSNYIGFSGMLQVRQIACNATYPAAVRLPR
VKASTLASAGATAGATPFAIVLNCNGTARVGVSFDAAGGSTVKSAQAGVLGPANEGAPGAAGGVGVQLTDARTNPVPLQQ
SNPVGTIDANAPATYAYALRYFALAPHAKPGVVSGAMTFTFDYQ
>Mature_364_residues
MEAAISTFGDVGRARGRLEWRVLSRTPALKNPMIDALKSTALLTLLPASLLCSGPARAACTSTPGMPYLQAIDTIAAESN
LAVGATIPGTARHYTLTGKCDYGEPYQVPGAVIVACYYGSGKEVMPGVYSTGVSGLGIRLRNAAGEPMLNAAGRSCDTRG
ASLGTLNADMTYSVSVSTEFVKTGSIAAGALDPSQTRFGFGVYHGNGLGGTSNYIGFSGMLQVRQIACNATYPAAVRLPR
VKASTLASAGATAGATPFAIVLNCNGTARVGVSFDAAGGSTVKSAQAGVLGPANEGAPGAAGGVGVQLTDARTNPVPLQQ
SNPVGTIDANAPATYAYALRYFALAPHAKPGVVSGAMTFTFDYQ

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36945; Mature: 36945

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAAISTFGDVGRARGRLEWRVLSRTPALKNPMIDALKSTALLTLLPASLLCSGPARAAC
CCCHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
TSTPGMPYLQAIDTIAAESNLAVGATIPGTARHYTLTGKCDYGEPYQVPGAVIVACYYGS
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECC
GKEVMPGVYSTGVSGLGIRLRNAAGEPMLNAAGRSCDTRGASLGTLNADMTYSVSVSTEF
CCCCCCCHHHCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCEEEEEEEEEEE
VKTGSIAAGALDPSQTRFGFGVYHGNGLGGTSNYIGFSGMLQVRQIACNATYPAAVRLPR
EECCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHEEEHHHCCCCCCCEEECCC
VKASTLASAGATAGATPFAIVLNCNGTARVGVSFDAAGGSTVKSAQAGVLGPANEGAPGA
CHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCC
AGGVGVQLTDARTNPVPLQQSNPVGTIDANAPATYAYALRYFALAPHAKPGVVSGAMTFT
CCCCEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEECEEEEE
FDYQ
EECC
>Mature Secondary Structure
MEAAISTFGDVGRARGRLEWRVLSRTPALKNPMIDALKSTALLTLLPASLLCSGPARAAC
CCCHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
TSTPGMPYLQAIDTIAAESNLAVGATIPGTARHYTLTGKCDYGEPYQVPGAVIVACYYGS
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECC
GKEVMPGVYSTGVSGLGIRLRNAAGEPMLNAAGRSCDTRGASLGTLNADMTYSVSVSTEF
CCCCCCCHHHCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCEEEEEEEEEEE
VKTGSIAAGALDPSQTRFGFGVYHGNGLGGTSNYIGFSGMLQVRQIACNATYPAAVRLPR
EECCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHEEEHHHCCCCCCCEEECCC
VKASTLASAGATAGATPFAIVLNCNGTARVGVSFDAAGGSTVKSAQAGVLGPANEGAPGA
CHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCC
AGGVGVQLTDARTNPVPLQQSNPVGTIDANAPATYAYALRYFALAPHAKPGVVSGAMTFT
CCCCEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEECEEEEE
FDYQ
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA