| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is fatA [H]
Identifier: 73537521
GI number: 73537521
Start: 269098
End: 271362
Strand: Reverse
Name: fatA [H]
Synonym: Reut_B3686
Alternate gene names: 73537521
Gene position: 271362-269098 (Counterclockwise)
Preceding gene: 73537523
Following gene: 73537520
Centisome position: 9.95
GC content: 65.43
Gene sequence:
>2265_bases ATGCCGGTCCCCGGTCAGACTGCCCTGGCAGCCCCCCTCACCACAACGAGATCGTTCCAGACAACAAGCACCCTCCCAGG CATAGCGGCCGCGTGCCCGCGACCGGCTTGGCGAGGTCTCGCACCGTCTCTGGCAATGGCAGGCCTGCTGGCATTGACCA CCCTGGACCCCGCCCGGGCTCAGGACGGCGCCACTGCCACCGGCAATGTCAGTGCGCAAACCTTGCCGGAGGTCCGTGTC ACCGCCGATGCGTCACCGGAAGACCTGCCCGCGCCCTATGCCGGCGGCCAGGTCGCGCGCGGTGCGCGGCTTGGTGTGCT GGGCAACACCAGCATCATGAAGGCGCCGTTCAACGTGAGCAGCTACACCGCGCAGATGATCCAGGACCAGCAATCTCCAA CGCTGGCTGACGCTGTCAACAAGGATCCATCGGTGCGATTCACCGGCCTGCCCGGCGGCAACATCGACAACTTCTATATC CGCGGCTTCCCGGTAGGCGAAGGCAACAGCGGCGAAATCGCATTCGACGGCCTGTACGGCGTGGCACCGAATTACCGCGT CTTCACCGACTACGTGGAGCGCCTCGAAGTCATCAAAGGGCCGGCCGCGATGCTATATGGCATGTCCCCCAACAGCGGCG TGGGGGGCGTGATCAACATCGTGCCCAAGCGCGCGCACGAGGACCTGGCTTCGGTGACTGCGAGCTATGCGTCCGACACG CAGTTCGGCGGCCACGTCGACTTGAGCCAGCGCTTCGGCGAATCGAGGGAATGGGGTGTGCGCTTCAACGGCAGCTACTA CCAGGGCGATACACCCATGGATAACCAGTCGCGCAAGGCCGGCATCGGCGCATTGTCGCTGGACTACCAGGGCAAGCAGC TGCGGGCCTCGCTGGACGTGATTGGCCAGCAGGAAAAGATCGATGCGCCGGGCCGCGCTTTCATCATGGGGCCCGGCCTG CAGGCCATCCCAGGCGCGCCGGACGGCCGACGCAACGTCACGCAGCCGTGGGAATGGACGCGCGGCACTGACGAGTCCCT GCTGTTCCGCACGGAATACGACATCAACGACCACCTCACCGTCTTCGCCGATGCCGGCGGTGGCTGGACACAGCTTTCGC GCCTGTTCGGCACCACGCCACAAATCGTCAACGCGCAGGGCGACACGTTGAGCACGCCCACCTATTACAAGTTCAAGGTC GATCGCGCCACGTACGATGCCGGCTTGCGCAGCCGCTTTGACACCGGCCCCCTGCGCCATGCCGTGACCTTCCAGGCGAG CGCCTACGCCGACAGCCTGGACCGCGCCAACACCACAGGCACGCCCGTGGCATCGAATATCTATAACCCCGTGGTACGTC CGGCCCAGGGTCTGCCTGCGCCCGATAGCGTTCCCAAAGTCTCGGATAACGACCAGACGGGCTTCTCGCTCGCGGACACC ATGTCCGCGCTGGATGACCGCGTGCTGTTGACGCTGGGCGTGCGGCAGCAGCGCATCCGCTCACGCAATTTCGGCGCAAC AGGGGCCGTGACTTCGTCCTATGAGGAAAGCGCCACCACACCGATGGCGGGCCTCGTCGTGCAGCCATGGAAGCGCGTGT CGCTGTATGCGAACTACGTCCAGGGCTTGAGCAAGGGCGACGTGGCGCCCCCTACGGCGAGCAACTCGGGCGAGGTGTTC GCGCCGTATAAGACCACGCAGTACGAGGTCGGCACCAAGGTCGATTTCGGCCGCTTCAGCGCCACGCTGGCCGCGTTCCA GATCAGCAAGCCCAGCGGCCAGCTCGGCGGCAATGTGTTCTCGGTCAACGGCGAACAACGCAACCGCGGGCTGGAGCTGA ACCTGTTCGGCCAGGTTGCGCCCGGTGTGCGGCTGTTGGGTGGCGTGGCGCTGATCGATGGCGAGATCACGAGGTCCGGC ACCGCGGCCGCGGTCGGCAAGGACCCGATCGGCGTGCCGCGCGTTCAGGCCAACCTTGGTGCGGAATGGGACTTGCCGTG GGTAGCGGGCCTGACCGTAAGCGGCACCATGATCTACACGGGCAGGCAATACGTGAACCAGCTCAATACCGCCAGCCTGC CGTCATGGGCCAGGTTCGACCTGGGCGCACGCTATCGCACGCGCATCACGGGAAAGACCACGACCTTCCGCGCCAACGTG CTCAACGTATTCGACCGCAACTACTGGTCGGGTGTGACATCGTGGGGCGGCTTCTCGCAAGCCGCGCCGCGCACGGTAAT GCTGTCCGCCACCGTTGAATTCTGA
Upstream 100 bases:
>100_bases TGATTCGCATTTGCAATAGGCTCCTGACACCACTTACCTGTCCGATACGATCCGATCCTCGCTGACCGCTCGTTGTGGAC GTCAACGAGGAACCTTGAGC
Downstream 100 bases:
>100_bases GACGCGCTTGCACTGCATGACTGCATCGCTGACCACCAACGCCCCCTCGGACCAGACCATGTGGACTGACCATGATTCCG TACGCGCTTTGCCGGATCGC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: OM2 [H]
Number of amino acids: Translated: 754; Mature: 753
Protein sequence:
>754_residues MPVPGQTALAAPLTTTRSFQTTSTLPGIAAACPRPAWRGLAPSLAMAGLLALTTLDPARAQDGATATGNVSAQTLPEVRV TADASPEDLPAPYAGGQVARGARLGVLGNTSIMKAPFNVSSYTAQMIQDQQSPTLADAVNKDPSVRFTGLPGGNIDNFYI RGFPVGEGNSGEIAFDGLYGVAPNYRVFTDYVERLEVIKGPAAMLYGMSPNSGVGGVINIVPKRAHEDLASVTASYASDT QFGGHVDLSQRFGESREWGVRFNGSYYQGDTPMDNQSRKAGIGALSLDYQGKQLRASLDVIGQQEKIDAPGRAFIMGPGL QAIPGAPDGRRNVTQPWEWTRGTDESLLFRTEYDINDHLTVFADAGGGWTQLSRLFGTTPQIVNAQGDTLSTPTYYKFKV DRATYDAGLRSRFDTGPLRHAVTFQASAYADSLDRANTTGTPVASNIYNPVVRPAQGLPAPDSVPKVSDNDQTGFSLADT MSALDDRVLLTLGVRQQRIRSRNFGATGAVTSSYEESATTPMAGLVVQPWKRVSLYANYVQGLSKGDVAPPTASNSGEVF APYKTTQYEVGTKVDFGRFSATLAAFQISKPSGQLGGNVFSVNGEQRNRGLELNLFGQVAPGVRLLGGVALIDGEITRSG TAAAVGKDPIGVPRVQANLGAEWDLPWVAGLTVSGTMIYTGRQYVNQLNTASLPSWARFDLGARYRTRITGKTTTFRANV LNVFDRNYWSGVTSWGGFSQAAPRTVMLSATVEF
Sequences:
>Translated_754_residues MPVPGQTALAAPLTTTRSFQTTSTLPGIAAACPRPAWRGLAPSLAMAGLLALTTLDPARAQDGATATGNVSAQTLPEVRV TADASPEDLPAPYAGGQVARGARLGVLGNTSIMKAPFNVSSYTAQMIQDQQSPTLADAVNKDPSVRFTGLPGGNIDNFYI RGFPVGEGNSGEIAFDGLYGVAPNYRVFTDYVERLEVIKGPAAMLYGMSPNSGVGGVINIVPKRAHEDLASVTASYASDT QFGGHVDLSQRFGESREWGVRFNGSYYQGDTPMDNQSRKAGIGALSLDYQGKQLRASLDVIGQQEKIDAPGRAFIMGPGL QAIPGAPDGRRNVTQPWEWTRGTDESLLFRTEYDINDHLTVFADAGGGWTQLSRLFGTTPQIVNAQGDTLSTPTYYKFKV DRATYDAGLRSRFDTGPLRHAVTFQASAYADSLDRANTTGTPVASNIYNPVVRPAQGLPAPDSVPKVSDNDQTGFSLADT MSALDDRVLLTLGVRQQRIRSRNFGATGAVTSSYEESATTPMAGLVVQPWKRVSLYANYVQGLSKGDVAPPTASNSGEVF APYKTTQYEVGTKVDFGRFSATLAAFQISKPSGQLGGNVFSVNGEQRNRGLELNLFGQVAPGVRLLGGVALIDGEITRSG TAAAVGKDPIGVPRVQANLGAEWDLPWVAGLTVSGTMIYTGRQYVNQLNTASLPSWARFDLGARYRTRITGKTTTFRANV LNVFDRNYWSGVTSWGGFSQAAPRTVMLSATVEF >Mature_753_residues PVPGQTALAAPLTTTRSFQTTSTLPGIAAACPRPAWRGLAPSLAMAGLLALTTLDPARAQDGATATGNVSAQTLPEVRVT ADASPEDLPAPYAGGQVARGARLGVLGNTSIMKAPFNVSSYTAQMIQDQQSPTLADAVNKDPSVRFTGLPGGNIDNFYIR GFPVGEGNSGEIAFDGLYGVAPNYRVFTDYVERLEVIKGPAAMLYGMSPNSGVGGVINIVPKRAHEDLASVTASYASDTQ FGGHVDLSQRFGESREWGVRFNGSYYQGDTPMDNQSRKAGIGALSLDYQGKQLRASLDVIGQQEKIDAPGRAFIMGPGLQ AIPGAPDGRRNVTQPWEWTRGTDESLLFRTEYDINDHLTVFADAGGGWTQLSRLFGTTPQIVNAQGDTLSTPTYYKFKVD RATYDAGLRSRFDTGPLRHAVTFQASAYADSLDRANTTGTPVASNIYNPVVRPAQGLPAPDSVPKVSDNDQTGFSLADTM SALDDRVLLTLGVRQQRIRSRNFGATGAVTSSYEESATTPMAGLVVQPWKRVSLYANYVQGLSKGDVAPPTASNSGEVFA PYKTTQYEVGTKVDFGRFSATLAAFQISKPSGQLGGNVFSVNGEQRNRGLELNLFGQVAPGVRLLGGVALIDGEITRSGT AAAVGKDPIGVPRVQANLGAEWDLPWVAGLTVSGTMIYTGRQYVNQLNTASLPSWARFDLGARYRTRITGKTTTFRANVL NVFDRNYWSGVTSWGGFSQAAPRTVMLSATVEF
Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=388, Percent_Identity=27.8350515463918, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787344, Length=315, Percent_Identity=27.3015873015873, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80374; Mature: 80243
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPGQTALAAPLTTTRSFQTTSTLPGIAAACPRPAWRGLAPSLAMAGLLALTTLDPARA CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHCCCHHHC QDGATATGNVSAQTLPEVRVTADASPEDLPAPYAGGQVARGARLGVLGNTSIMKAPFNVS CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCHH SYTAQMIQDQQSPTLADAVNKDPSVRFTGLPGGNIDNFYIRGFPVGEGNSGEIAFDGLYG HHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEECCEEC VAPNYRVFTDYVERLEVIKGPAAMLYGMSPNSGVGGVINIVPKRAHEDLASVTASYASDT CCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCC QFGGHVDLSQRFGESREWGVRFNGSYYQGDTPMDNQSRKAGIGALSLDYQGKQLRASLDV CCCCEEEHHHHCCCCCCCCEEECCEEEECCCCCCCCCHHCCCEEEEECCCCHHHHHHHHH IGQQEKIDAPGRAFIMGPGLQAIPGAPDGRRNVTQPWEWTRGTDESLLFRTEYDINDHLT CCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEE VFADAGGGWTQLSRLFGTTPQIVNAQGDTLSTPTYYKFKVDRATYDAGLRSRFDTGPLRH EEEECCCCHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCE AVTFQASAYADSLDRANTTGTPVASNIYNPVVRPAQGLPAPDSVPKVSDNDQTGFSLADT EEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH MSALDDRVLLTLGVRQQRIRSRNFGATGAVTSSYEESATTPMAGLVVQPWKRVSLYANYV HHHHCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEECCHHHHHHHHHHH QGLSKGDVAPPTASNSGEVFAPYKTTQYEVGTKVDFGRFSATLAAFQISKPSGQLGGNVF HCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCHHHHEEEEEEEECCCCCCCCCEEE SVNGEQRNRGLELNLFGQVAPGVRLLGGVALIDGEITRSGTAAAVGKDPIGVPRVQANLG EECCHHHCCCEEEEEECCCCCCHHHHCCEEEECCCEECCCCEEECCCCCCCCCEEECCCC AEWDLPWVAGLTVSGTMIYTGRQYVNQLNTASLPSWARFDLGARYRTRITGKTTTFRANV CCCCCCEEECEEECCEEEECCHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCEEEEHHH LNVFDRNYWSGVTSWGGFSQAAPRTVMLSATVEF HHHHHCHHHCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure PVPGQTALAAPLTTTRSFQTTSTLPGIAAACPRPAWRGLAPSLAMAGLLALTTLDPARA CCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHCCCHHHC QDGATATGNVSAQTLPEVRVTADASPEDLPAPYAGGQVARGARLGVLGNTSIMKAPFNVS CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCHH SYTAQMIQDQQSPTLADAVNKDPSVRFTGLPGGNIDNFYIRGFPVGEGNSGEIAFDGLYG HHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEECCEEC VAPNYRVFTDYVERLEVIKGPAAMLYGMSPNSGVGGVINIVPKRAHEDLASVTASYASDT CCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCC QFGGHVDLSQRFGESREWGVRFNGSYYQGDTPMDNQSRKAGIGALSLDYQGKQLRASLDV CCCCEEEHHHHCCCCCCCCEEECCEEEECCCCCCCCCHHCCCEEEEECCCCHHHHHHHHH IGQQEKIDAPGRAFIMGPGLQAIPGAPDGRRNVTQPWEWTRGTDESLLFRTEYDINDHLT CCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEE VFADAGGGWTQLSRLFGTTPQIVNAQGDTLSTPTYYKFKVDRATYDAGLRSRFDTGPLRH EEEECCCCHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCE AVTFQASAYADSLDRANTTGTPVASNIYNPVVRPAQGLPAPDSVPKVSDNDQTGFSLADT EEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH MSALDDRVLLTLGVRQQRIRSRNFGATGAVTSSYEESATTPMAGLVVQPWKRVSLYANYV HHHHCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEECCHHHHHHHHHHH QGLSKGDVAPPTASNSGEVFAPYKTTQYEVGTKVDFGRFSATLAAFQISKPSGQLGGNVF HCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCHHHHEEEEEEEECCCCCCCCCEEE SVNGEQRNRGLELNLFGQVAPGVRLLGGVALIDGEITRSGTAAAVGKDPIGVPRVQANLG EECCHHHCCCEEEEEECCCCCCHHHHCCEEEECCCEECCCCEEECCCCCCCCCEEECCCC AEWDLPWVAGLTVSGTMIYTGRQYVNQLNTASLPSWARFDLGARYRTRITGKTTTFRANV CCCCCCEEECEEECCEEEECCHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCEEEEHHH LNVFDRNYWSGVTSWGGFSQAAPRTVMLSATVEF HHHHHCHHHCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2830268; 13129954; 2311935 [H]