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The map label for this gene is rcsB [H]

Identifier: 73537502

GI number: 73537502

Start: 248928

End: 249575

Strand: Reverse

Name: rcsB [H]

Synonym: Reut_B3667

Alternate gene names: 73537502

Gene position: 249575-248928 (Counterclockwise)

Preceding gene: 73537504

Following gene: 73537501

Centisome position: 9.15

GC content: 64.51

Gene sequence:

>648_bases
ATGAACGGACCGCTCATCCGCGTTGCGGTTGCGGACGACCACCCGCTCGTCGTCACCGCACTGCGCGATTGCCTGCATCG
CTCCGCGCGTTTCCACATTGCCTGCGAATGCACCGGCGGCTCCGAACTGGTGCAGGCGCTTGACCGGCAGCCAGCCGATA
TCGCGATCACCGACTTCTGCATGGGCCACGGCGATGCCACGCTGGACGGCTTCAACCTGCTGAACCGCCTGGCGCGGCGC
CATCGTGGCACGCGCATCGTCGTGGTCAGCGCGCAGTCGAACGCCGCCATCATCCGGCGCGCGGTGAAGCTCGGCGCACG
CGCGTTCGTCAGCAAGGAAGACGAACTCGAAGAAACCTTGCGGGCGTGCTTTCACGTCATGACCAGCGAAAGCTGCTACT
ACTCGCCGTCGATCCGCGCGATCCTCGATGACGCGGCGATGGTCGATGCCCCCGCCACCGACCTCACGCTGCGCGAGCTC
GAAGTGGTCCGCCTGTATGCGCAAGGCATGCAGCTCAATGAGATTGCCGCCAAGCTTGGCAGGTCGGTCAGCACCATCTC
TAGCCAGAAGACCGTGGCCATGCGCAAGCTGGGCGTGAACACCAACACCGACCTGATCCGGTACGCGTACGAGAACGGTC
TGATCTGA

Upstream 100 bases:

>100_bases
GCCGGTCGCAACGCAGCACCATCCCCCCTTCCTCCTCCCTTCTCCGCACCACAGCAGGTGCACCGCCGCGCAGCGTGCGC
ACCAGAAATGGGGGACAGTC

Downstream 100 bases:

>100_bases
GCGCCCCATGCAGCAGCTCTTCGACAGTACCCGCGTGTCGCTGGCAAGCGCCTTCGACACGCTCGCGGACAATGCCCGCC
GGCAACAGCATCTCTATTCG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNGPLIRVAVADDHPLVVTALRDCLHRSARFHIACECTGGSELVQALDRQPADIAITDFCMGHGDATLDGFNLLNRLARR
HRGTRIVVVSAQSNAAIIRRAVKLGARAFVSKEDELEETLRACFHVMTSESCYYSPSIRAILDDAAMVDAPATDLTLREL
EVVRLYAQGMQLNEIAAKLGRSVSTISSQKTVAMRKLGVNTNTDLIRYAYENGLI

Sequences:

>Translated_215_residues
MNGPLIRVAVADDHPLVVTALRDCLHRSARFHIACECTGGSELVQALDRQPADIAITDFCMGHGDATLDGFNLLNRLARR
HRGTRIVVVSAQSNAAIIRRAVKLGARAFVSKEDELEETLRACFHVMTSESCYYSPSIRAILDDAAMVDAPATDLTLREL
EVVRLYAQGMQLNEIAAKLGRSVSTISSQKTVAMRKLGVNTNTDLIRYAYENGLI
>Mature_215_residues
MNGPLIRVAVADDHPLVVTALRDCLHRSARFHIACECTGGSELVQALDRQPADIAITDFCMGHGDATLDGFNLLNRLARR
HRGTRIVVVSAQSNAAIIRRAVKLGARAFVSKEDELEETLRACFHVMTSESCYYSPSIRAILDDAAMVDAPATDLTLREL
EVVRLYAQGMQLNEIAAKLGRSVSTISSQKTVAMRKLGVNTNTDLIRYAYENGLI

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=204, Percent_Identity=31.3725490196078, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1790102, Length=208, Percent_Identity=30.2884615384615, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786747, Length=207, Percent_Identity=25.6038647342995, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1788712, Length=205, Percent_Identity=27.3170731707317, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1788222, Length=214, Percent_Identity=21.9626168224299, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23571; Mature: 23571

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGPLIRVAVADDHPLVVTALRDCLHRSARFHIACECTGGSELVQALDRQPADIAITDFC
CCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCEEEEHHH
MGHGDATLDGFNLLNRLARRHRGTRIVVVSAQSNAAIIRRAVKLGARAFVSKEDELEETL
HCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
RACFHVMTSESCYYSPSIRAILDDAAMVDAPATDLTLRELEVVRLYAQGMQLNEIAAKLG
HHHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHC
RSVSTISSQKTVAMRKLGVNTNTDLIRYAYENGLI
CHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHCCCC
>Mature Secondary Structure
MNGPLIRVAVADDHPLVVTALRDCLHRSARFHIACECTGGSELVQALDRQPADIAITDFC
CCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCEEEEHHH
MGHGDATLDGFNLLNRLARRHRGTRIVVVSAQSNAAIIRRAVKLGARAFVSKEDELEETL
HCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
RACFHVMTSESCYYSPSIRAILDDAAMVDAPATDLTLRELEVVRLYAQGMQLNEIAAKLG
HHHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHC
RSVSTISSQKTVAMRKLGVNTNTDLIRYAYENGLI
CHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]