| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yebQ [H]
Identifier: 73537500
GI number: 73537500
Start: 244020
End: 245420
Strand: Reverse
Name: yebQ [H]
Synonym: Reut_B3665
Alternate gene names: 73537500
Gene position: 245420-244020 (Counterclockwise)
Preceding gene: 73537501
Following gene: 73537496
Centisome position: 9.0
GC content: 68.45
Gene sequence:
>1401_bases ATGTCGTCACATCAAGGGCTTCCGCACCCACAGCGCAGCTGGGCCATCCTTACCGTCTTCTGCGGCCTGATCATGGCCGT GCTGGACGGCTCCATCGCCAATATTGCGTTGCCGTCGATCGCGCGCCAGCTCCAGTCCGAGCCGTCGAACACGATCTGGG TCGTGAACGCCTATCAGCTCACGGTCACGGTTTGCCTGCTGCCGCTGTCGTCACTGGGCGATATCTTCGGCTACAAGCGT GTGTACCGAGCGGGGCTCGCCACCTTCCTGGTCGGATCGCTGCTGTGCGCGCTGGCCGTCAACCTGCCCATGCTGGTAGC GGCGCGCGTGCTGCAGGGCCTGGGCGGCGCCGGGATCATGAGCGTGAACACGGCGCTCGTGCGCTTTATCTATCCGCCTA CGCGCCTGGGCCGCGGCATTGGGCTGAACGCGCTGGTGGTCGGCGTGACCACCGCAATCGGCCCTTCGCTCGGGGCGCTG ATCCTGTCGCTGGCGAGCTGGCAATGGCTGTTCGCCGTCAATGTGCCGGTGGCCATCTTTGCGCTGGCACTCAGTCGCAG CGCGCTGCCTGACACGGCGCCGCAGCCACGCGAGTTCGACTACCCGAGCGCGGTGCTGTCGGCGGTGGTGTTTGGCCTGT TCATTCTTGGCGTCGACGGCCTTGGCCATGCGAGCCTGCGTATCGCCGGCGCGGCCGCGGTAGGCGGCGCCATCGTGCTG GGCTGGGTGCTGGTGCGCCGCCAGCACGGCCGCCCGTCGCCGCTCGTGCCCGTGGACCTGTTTGCCAGCCGCGCCTTCAC GCTGGCGGTCGGCACGTCGTTCTGCTCGTTCATGACGCAGATGCTGTCCTTCGTGGCGCTGCCGTTCTATTTCGAATACC AGCTTGGCCGGTCGCTGCATGAAACCGGCCTGCTGATCACACCGTGGCCGCTGACGGTGGCCCTGATGGCTGCGCTCTCT GGCCGGCTGTCGGACCGCTACCCGGCCAGCATCCTGGCTGGCGCCGGGTTGGCGCTGCTCGCTGCCGGCCTGCTTGGCCT GGCATTGCTGGGACGCGATGCCACCAGCCTCGACATCGCCTGGCGCATGGCGATCTGCGGGCTTGGCTTTGGCCTGTTCC AGTCGCCCAACAACCGCGCGATGATTGGCGCCACGCCCCCCGAGCGCAGCGGCGGCGCCAGCGGCGCGCAGGCCACGACG CGGCTGCTCGGGCAGACCACCGGCACGGCCGTGGTGGCGCTGCTGTTCAGCTTCGACCAGACCGGTGCCGGGCGACTCGC GCTGTACGCGGCCGTTGGCATGGCGACGCTCGGTGCGGTCATCAGCCTGAGCCGCCTGCGCGATGGCAGCAGCCCTCGAC ATGCGGGAACTGCCGTTATACGGGACGAACCTGACGCGTAG
Upstream 100 bases:
>100_bases CTACCACATTCTGTGCATTTGCGCGCGACGCCCCGCGCGCCGATAATGACGGCGCCGCGCCCGGTTCCACGGATGCGGCC TCGCCGCCACTGTCTCCCGC
Downstream 100 bases:
>100_bases TGGACGCGTCAGCACCACCGTTCGGCTATTCAGCCTTCGCGCCCGACTCCTTCACCACCTTCGCCCACTTGGCGATCTCC GACCGCTGGTAAGCCGCCAG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSSHQGLPHPQRSWAILTVFCGLIMAVLDGSIANIALPSIARQLQSEPSNTIWVVNAYQLTVTVCLLPLSSLGDIFGYKR VYRAGLATFLVGSLLCALAVNLPMLVAARVLQGLGGAGIMSVNTALVRFIYPPTRLGRGIGLNALVVGVTTAIGPSLGAL ILSLASWQWLFAVNVPVAIFALALSRSALPDTAPQPREFDYPSAVLSAVVFGLFILGVDGLGHASLRIAGAAAVGGAIVL GWVLVRRQHGRPSPLVPVDLFASRAFTLAVGTSFCSFMTQMLSFVALPFYFEYQLGRSLHETGLLITPWPLTVALMAALS GRLSDRYPASILAGAGLALLAAGLLGLALLGRDATSLDIAWRMAICGLGFGLFQSPNNRAMIGATPPERSGGASGAQATT RLLGQTTGTAVVALLFSFDQTGAGRLALYAAVGMATLGAVISLSRLRDGSSPRHAGTAVIRDEPDA
Sequences:
>Translated_466_residues MSSHQGLPHPQRSWAILTVFCGLIMAVLDGSIANIALPSIARQLQSEPSNTIWVVNAYQLTVTVCLLPLSSLGDIFGYKR VYRAGLATFLVGSLLCALAVNLPMLVAARVLQGLGGAGIMSVNTALVRFIYPPTRLGRGIGLNALVVGVTTAIGPSLGAL ILSLASWQWLFAVNVPVAIFALALSRSALPDTAPQPREFDYPSAVLSAVVFGLFILGVDGLGHASLRIAGAAAVGGAIVL GWVLVRRQHGRPSPLVPVDLFASRAFTLAVGTSFCSFMTQMLSFVALPFYFEYQLGRSLHETGLLITPWPLTVALMAALS GRLSDRYPASILAGAGLALLAAGLLGLALLGRDATSLDIAWRMAICGLGFGLFQSPNNRAMIGATPPERSGGASGAQATT RLLGQTTGTAVVALLFSFDQTGAGRLALYAAVGMATLGAVISLSRLRDGSSPRHAGTAVIRDEPDA >Mature_465_residues SSHQGLPHPQRSWAILTVFCGLIMAVLDGSIANIALPSIARQLQSEPSNTIWVVNAYQLTVTVCLLPLSSLGDIFGYKRV YRAGLATFLVGSLLCALAVNLPMLVAARVLQGLGGAGIMSVNTALVRFIYPPTRLGRGIGLNALVVGVTTAIGPSLGALI LSLASWQWLFAVNVPVAIFALALSRSALPDTAPQPREFDYPSAVLSAVVFGLFILGVDGLGHASLRIAGAAAVGGAIVLG WVLVRRQHGRPSPLVPVDLFASRAFTLAVGTSFCSFMTQMLSFVALPFYFEYQLGRSLHETGLLITPWPLTVALMAALSG RLSDRYPASILAGAGLALLAAGLLGLALLGRDATSLDIAWRMAICGLGFGLFQSPNNRAMIGATPPERSGGASGAQATTR LLGQTTGTAVVALLFSFDQTGAGRLALYAAVGMATLGAVISLSRLRDGSSPRHAGTAVIRDEPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=422, Percent_Identity=52.132701421801, Blast_Score=416, Evalue=1e-117, Organism=Escherichia coli, GI1790195, Length=252, Percent_Identity=35.3174603174603, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1788392, Length=352, Percent_Identity=32.6704545454545, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1789042, Length=405, Percent_Identity=23.9506172839506, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788710, Length=326, Percent_Identity=25.4601226993865, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6325455, Length=155, Percent_Identity=32.258064516129, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321663, Length=215, Percent_Identity=26.5116279069767, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48485; Mature: 48354
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHQGLPHPQRSWAILTVFCGLIMAVLDGSIANIALPSIARQLQSEPSNTIWVVNAYQL CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHH TVTVCLLPLSSLGDIFGYKRVYRAGLATFLVGSLLCALAVNLPMLVAARVLQGLGGAGIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH SVNTALVRFIYPPTRLGRGIGLNALVVGVTTAIGPSLGALILSLASWQWLFAVNVPVAIF HHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEECHHHHHH ALALSRSALPDTAPQPREFDYPSAVLSAVVFGLFILGVDGLGHASLRIAGAAAVGGAIVL HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH GWVLVRRQHGRPSPLVPVDLFASRAFTLAVGTSFCSFMTQMLSFVALPFYFEYQLGRSLH HHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ETGLLITPWPLTVALMAALSGRLSDRYPASILAGAGLALLAAGLLGLALLGRDATSLDIA HCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHH WRMAICGLGFGLFQSPNNRAMIGATPPERSGGASGAQATTRLLGQTTGTAVVALLFSFDQ HHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCC TGAGRLALYAAVGMATLGAVISLSRLRDGSSPRHAGTAVIRDEPDA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure SSHQGLPHPQRSWAILTVFCGLIMAVLDGSIANIALPSIARQLQSEPSNTIWVVNAYQL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHH TVTVCLLPLSSLGDIFGYKRVYRAGLATFLVGSLLCALAVNLPMLVAARVLQGLGGAGIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH SVNTALVRFIYPPTRLGRGIGLNALVVGVTTAIGPSLGALILSLASWQWLFAVNVPVAIF HHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEECHHHHHH ALALSRSALPDTAPQPREFDYPSAVLSAVVFGLFILGVDGLGHASLRIAGAAAVGGAIVL HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH GWVLVRRQHGRPSPLVPVDLFASRAFTLAVGTSFCSFMTQMLSFVALPFYFEYQLGRSLH HHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ETGLLITPWPLTVALMAALSGRLSDRYPASILAGAGLALLAAGLLGLALLGRDATSLDIA HCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHH WRMAICGLGFGLFQSPNNRAMIGATPPERSGGASGAQATTRLLGQTTGTAVVALLFSFDQ HHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCC TGAGRLALYAAVGMATLGAVISLSRLRDGSSPRHAGTAVIRDEPDA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]