Click here to switch to the map view.

The map label for this gene is caiA [C]

Identifier: 73537391

GI number: 73537391

Start: 109244

End: 110236

Strand: Reverse

Name: caiA [C]

Synonym: Reut_B3556

Alternate gene names: 73537391

Gene position: 110236-109244 (Counterclockwise)

Preceding gene: 73537392

Following gene: 73537382

Centisome position: 4.04

GC content: 69.99

Gene sequence:

>993_bases
ATGCATAACACCTATTCCGACGCGCTCGACGCCCTGCTGCGCGATCTTTGCCAACCTGCCACGGTCCGTGCCATCGAACA
GGGTGCCGATACGGCGCCACTGTGGCAAGCGCTGCTGGAAAGCGGCTTTGCCGACTGCCTGCTGCCTGAATCGGCCGATG
GCGCCGGACTATCCCTGTCCGACGTGGCCCCGGTGCTCTACGTACTGGGTCGTCACGCCATGCCGCTGCCGCTCGCGCAG
ACGCTGTTCGCCCGCGCGCTGCTACACGCGCACGGCGTGCAGGCGCCAGCCGAACCGATCGCACTCGCAAGTTTCGATGA
CGAGAGCCCAGCCACGCTGGTGGCCGACGCCCGCCACGCGGGCTGGTTCCTGGTGCAGACCGGCACCCGCTGCGTACTGC
TGCCGGCGTCCACCGCCGGTGCCGAGCCGACCGGCGCCCACGCCGACCTGACCGTGCGCCTGCGCCGCCCCGATATCCAG
GCTGAACAGGCCTTCGAACTGCCCGCCGGCACGCTGCGCACCATCGGCGCCTGCCTGCATGCCGCGCAGATGGCCGGCGC
ACTGTCCCAGGTCATGGACATGACGCTGCAGTACGCCAACGACCGCCTGCAGTTCGGGCGCGCGATCGGCAAATTCCAGG
CCATCCAGCACCAGATCAGCGAGATGGCCGAGCACGTTGCCGCCTCGCGGTTGGCCGCACAGATCGCGTGCGAAGGCTCG
GGCAGCACGCCCGATCCGGCCCGCGCCGCCATCGGCAAGTTGCGCGCGAGCGACGCGGTCACGCCCGTGGCCGCCATCGC
CCATGCGGTGCACGGCGCCATCGGCATCACCGAGGAATTCGACCTGCAGCTCTACACGCGCCGGCTGCACGCATGGCGCG
TGGCCGACGGTTCGGATCGCTGGTGGAGCCGCGTGCTCGGCGAGCTTGTGTGCGCGGAGCCATCACGCGGCGCGGTGGAA
CTGGTGCGAGACTGGTGCGAGACCGCTGGCTGA

Upstream 100 bases:

>100_bases
CGTCCTATTCGCTGCGCGGCGGCACGCGCGAGATCCTGCGCGGCATGATTGCGCGCGGCCTGGGTCTGCGCTGAACGCGT
CCGTTACTGAGTCCACCGCC

Downstream 100 bases:

>100_bases
CATCCGAAACGAAACGGCGGCCCGGTTAGGGCCGCCGTTTCGTACACGGAAAACTCTCAGGCTCAGGCCGCCAGGCTCAG
CCCGCCACCGGGCACCTTGC

Product: acyl-CoA dehydrogenase

Products: gamma-butyrobetaine; Acceptor; gamma-butyrobetainyl-CoA [C]

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase FadE; Acyl-CoA Dehydrogenase C-Terminal; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; Acyl-CoA Dehydrogenase C-Terminal Domain-Containing; Oxidoreductase; Acetyl-CoA Acetyltransferase; Acyl-CoA Dehydrogenase C-Terminal Domain Protein

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MHNTYSDALDALLRDLCQPATVRAIEQGADTAPLWQALLESGFADCLLPESADGAGLSLSDVAPVLYVLGRHAMPLPLAQ
TLFARALLHAHGVQAPAEPIALASFDDESPATLVADARHAGWFLVQTGTRCVLLPASTAGAEPTGAHADLTVRLRRPDIQ
AEQAFELPAGTLRTIGACLHAAQMAGALSQVMDMTLQYANDRLQFGRAIGKFQAIQHQISEMAEHVAASRLAAQIACEGS
GSTPDPARAAIGKLRASDAVTPVAAIAHAVHGAIGITEEFDLQLYTRRLHAWRVADGSDRWWSRVLGELVCAEPSRGAVE
LVRDWCETAG

Sequences:

>Translated_330_residues
MHNTYSDALDALLRDLCQPATVRAIEQGADTAPLWQALLESGFADCLLPESADGAGLSLSDVAPVLYVLGRHAMPLPLAQ
TLFARALLHAHGVQAPAEPIALASFDDESPATLVADARHAGWFLVQTGTRCVLLPASTAGAEPTGAHADLTVRLRRPDIQ
AEQAFELPAGTLRTIGACLHAAQMAGALSQVMDMTLQYANDRLQFGRAIGKFQAIQHQISEMAEHVAASRLAAQIACEGS
GSTPDPARAAIGKLRASDAVTPVAAIAHAVHGAIGITEEFDLQLYTRRLHAWRVADGSDRWWSRVLGELVCAEPSRGAVE
LVRDWCETAG
>Mature_330_residues
MHNTYSDALDALLRDLCQPATVRAIEQGADTAPLWQALLESGFADCLLPESADGAGLSLSDVAPVLYVLGRHAMPLPLAQ
TLFARALLHAHGVQAPAEPIALASFDDESPATLVADARHAGWFLVQTGTRCVLLPASTAGAEPTGAHADLTVRLRRPDIQ
AEQAFELPAGTLRTIGACLHAAQMAGALSQVMDMTLQYANDRLQFGRAIGKFQAIQHQISEMAEHVAASRLAAQIACEGS
GSTPDPARAAIGKLRASDAVTPVAAIAHAVHGAIGITEEFDLQLYTRRLHAWRVADGSDRWWSRVLGELVCAEPSRGAVE
LVRDWCETAG

Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.- [C]

Molecular weight: Translated: 35027; Mature: 35027

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNTYSDALDALLRDLCQPATVRAIEQGADTAPLWQALLESGFADCLLPESADGAGLSLS
CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCHH
DVAPVLYVLGRHAMPLPLAQTLFARALLHAHGVQAPAEPIALASFDDESPATLVADARHA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECCCCC
GWFLVQTGTRCVLLPASTAGAEPTGAHADLTVRLRRPDIQAEQAFELPAGTLRTIGACLH
CEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHH
AAQMAGALSQVMDMTLQYANDRLQFGRAIGKFQAIQHQISEMAEHVAASRLAAQIACEGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
GSTPDPARAAIGKLRASDAVTPVAAIAHAVHGAIGITEEFDLQLYTRRLHAWRVADGSDR
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH
WWSRVLGELVCAEPSRGAVELVRDWCETAG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MHNTYSDALDALLRDLCQPATVRAIEQGADTAPLWQALLESGFADCLLPESADGAGLSLS
CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCHH
DVAPVLYVLGRHAMPLPLAQTLFARALLHAHGVQAPAEPIALASFDDESPATLVADARHA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECCCCC
GWFLVQTGTRCVLLPASTAGAEPTGAHADLTVRLRRPDIQAEQAFELPAGTLRTIGACLH
CEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHH
AAQMAGALSQVMDMTLQYANDRLQFGRAIGKFQAIQHQISEMAEHVAASRLAAQIACEGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
GSTPDPARAAIGKLRASDAVTPVAAIAHAVHGAIGITEEFDLQLYTRRLHAWRVADGSDR
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH
WWSRVLGELVCAEPSRGAVELVRDWCETAG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: crotono-betaine; reduced acceptor; crotonobetainyl-CoA [C]

Specific reaction: reduced acceptor + crotono-betaine = Acceptor + gamma-butyrobetaine reduced acceptor + crotonobetainyl-CoA = Acceptor + gamma-butyrobetainyl-CoA [C]

General reaction: Oxidoreductases; Acting on the CH-CH group of donors; With other acceptors [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA