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The map label for this gene is yngJ [H]

Identifier: 73537369

GI number: 73537369

Start: 80293

End: 81426

Strand: Reverse

Name: yngJ [H]

Synonym: Reut_B3534

Alternate gene names: 73537369

Gene position: 81426-80293 (Counterclockwise)

Preceding gene: 73537370

Following gene: 161611273

Centisome position: 2.99

GC content: 67.9

Gene sequence:

>1134_bases
ATGGACTTCACCTACAGCGAAGAGCAGCAGATGCTGGCGGACAGCCTGCGCCGCTTCATCGATACCGAATACACCTTCGA
CGCGCGCCGCAAGAGCTCGCGCGCCGGCGAGGCGCTGGACCGCAACCTGTGGAACAAGCTTGCCGAAATGGGCGTGCTGG
GCCTGACCGTGCCGGCCGACTTCGGCGGGTTCGGCGAAGGCGCCGCGAGCCAGCTCGTGGTGCAGCGTGAGCTGGGCCGC
GGCCTGGTGCTGGAACCGGTCACGCCCAGCGGCGTCATGTCGGCGGCGATCCTGTCGGCCTACGGCAGCCTGCAGCAGAA
GGAAGAATGGCTGCCGGCAATCGCTAGCGGCGAGCGCATCGTCACCCTCGCCTACCTGGAACCGACCACGCGCTATCGTC
CCGAGACCGCCCGCGCCAGCGCCGAGCGCAGCGGCAGCGGCTACGTGCTGAACGGCACCAAGAGCCTGGTCTGGCACGGC
GCTTCGGCCGATGCCTACCTGCTGACCGCGCGCATCGCCGGCAGCAATGACGTCGCGTTGTTCCTGGTGCCGCGCGACAG
CGCCGGCCTGACCGTGACCGGCTACCCGACCATCGACGGCCTGCGCGCCGCCGACCTGTCGCTGCAGAACGTCACCGTGA
GCGCCGACGCCCTGGTGGGCCAGCCGGCTGATGGCTTGGCGGCCCTGGGCGTAGGCATGGAGCACGGCGTCGCCGCGCTG
TGCGCAGAAGGCGCAGGTGCGATGGAAAAGCTGATCGAGATCACCGGCGAATACCTGGCCACGCGCCAGCAGTTCGGCAA
GCCGCTTGCAGCGTTCCAGGCACTGCAACACCGCATGGCCGACATGCTCGTGCAAAAGGAACTGGCGCTGTCGATGGCCT
ATGTGGCCGTCCAGGCGATCGACGAAACCGACCCGGCACGTCGCCGCCGCATGCTGTCGGCCGCGAAGGTCACGCTCGCG
CGTGCCGGCCGCTACGTCGGCCAGCAGGCCGTGCAGCTGCATGGCGGCATGGGCATGACCGATGAACTGTCCGTGGGTGA
TTACTTCAAGCGCCTGACCATGCTCGACCAGCTGCTTGGCGACAGCGACTACCATCTGCAGCGATTTGGCGAAGTGATGG
AAACCGCTGCCTGA

Upstream 100 bases:

>100_bases
TACTACGACATGCGCAAGACCTCCATCTACGGCGGCGCCACCGAAGTGCAGAAGAACATCATCTCCAAGATGATCCTGGG
TTTCTGAAGGGATAGCAGAC

Downstream 100 bases:

>100_bases
GGCCAGCGTAGTCAGACCGGCGCTCCCGCAGTCTTGCAGGAGCGTCGTCCAGCGCGGCGAACCTGAGCCGGACCTAGTCC
GGTTCGCGTTCGCCGCGCTG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MDFTYSEEQQMLADSLRRFIDTEYTFDARRKSSRAGEALDRNLWNKLAEMGVLGLTVPADFGGFGEGAASQLVVQRELGR
GLVLEPVTPSGVMSAAILSAYGSLQQKEEWLPAIASGERIVTLAYLEPTTRYRPETARASAERSGSGYVLNGTKSLVWHG
ASADAYLLTARIAGSNDVALFLVPRDSAGLTVTGYPTIDGLRAADLSLQNVTVSADALVGQPADGLAALGVGMEHGVAAL
CAEGAGAMEKLIEITGEYLATRQQFGKPLAAFQALQHRMADMLVQKELALSMAYVAVQAIDETDPARRRRMLSAAKVTLA
RAGRYVGQQAVQLHGGMGMTDELSVGDYFKRLTMLDQLLGDSDYHLQRFGEVMETAA

Sequences:

>Translated_377_residues
MDFTYSEEQQMLADSLRRFIDTEYTFDARRKSSRAGEALDRNLWNKLAEMGVLGLTVPADFGGFGEGAASQLVVQRELGR
GLVLEPVTPSGVMSAAILSAYGSLQQKEEWLPAIASGERIVTLAYLEPTTRYRPETARASAERSGSGYVLNGTKSLVWHG
ASADAYLLTARIAGSNDVALFLVPRDSAGLTVTGYPTIDGLRAADLSLQNVTVSADALVGQPADGLAALGVGMEHGVAAL
CAEGAGAMEKLIEITGEYLATRQQFGKPLAAFQALQHRMADMLVQKELALSMAYVAVQAIDETDPARRRRMLSAAKVTLA
RAGRYVGQQAVQLHGGMGMTDELSVGDYFKRLTMLDQLLGDSDYHLQRFGEVMETAA
>Mature_377_residues
MDFTYSEEQQMLADSLRRFIDTEYTFDARRKSSRAGEALDRNLWNKLAEMGVLGLTVPADFGGFGEGAASQLVVQRELGR
GLVLEPVTPSGVMSAAILSAYGSLQQKEEWLPAIASGERIVTLAYLEPTTRYRPETARASAERSGSGYVLNGTKSLVWHG
ASADAYLLTARIAGSNDVALFLVPRDSAGLTVTGYPTIDGLRAADLSLQNVTVSADALVGQPADGLAALGVGMEHGVAAL
CAEGAGAMEKLIEITGEYLATRQQFGKPLAAFQALQHRMADMLVQKELALSMAYVAVQAIDETDPARRRRMLSAAKVTLA
RAGRYVGQQAVQLHGGMGMTDELSVGDYFKRLTMLDQLLGDSDYHLQRFGEVMETAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=358, Percent_Identity=26.8156424581006, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI4557233, Length=382, Percent_Identity=25.130890052356, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI226958414, Length=322, Percent_Identity=26.7080745341615, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI21361497, Length=362, Percent_Identity=27.0718232044199, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4501859, Length=360, Percent_Identity=25, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI4557235, Length=383, Percent_Identity=26.3707571801567, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI76496475, Length=348, Percent_Identity=26.4367816091954, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4501857, Length=360, Percent_Identity=24.4444444444444, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI4503943, Length=391, Percent_Identity=27.1099744245524, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI7656849, Length=366, Percent_Identity=24.3169398907104, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI7669494, Length=371, Percent_Identity=27.4932614555256, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4557231, Length=361, Percent_Identity=25.7617728531856, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI187960098, Length=361, Percent_Identity=25.7617728531856, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI38505218, Length=292, Percent_Identity=23.6301369863014, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87081958, Length=358, Percent_Identity=25.4189944134078, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1786223, Length=373, Percent_Identity=22.2520107238606, Blast_Score=75, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=355, Percent_Identity=27.6056338028169, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI71985184, Length=349, Percent_Identity=26.3610315186246, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17534353, Length=344, Percent_Identity=28.1976744186047, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=380, Percent_Identity=23.6842105263158, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=285, Percent_Identity=26.3157894736842, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=380, Percent_Identity=22.6315789473684, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=357, Percent_Identity=24.0896358543417, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=357, Percent_Identity=24.6498599439776, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=362, Percent_Identity=24.8618784530387, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=338, Percent_Identity=23.0769230769231, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=368, Percent_Identity=24.1847826086957, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=358, Percent_Identity=23.463687150838, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=260, Percent_Identity=24.2307692307692, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=242, Percent_Identity=24.7933884297521, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355753, Length=357, Percent_Identity=28.8515406162465, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=24.7311827956989, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24646207, Length=371, Percent_Identity=25.6064690026954, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281363737, Length=365, Percent_Identity=27.9452054794521, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24666513, Length=327, Percent_Identity=24.1590214067278, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19920834, Length=375, Percent_Identity=25.6, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24660351, Length=358, Percent_Identity=26.2569832402235, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40506; Mature: 40506

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTYSEEQQMLADSLRRFIDTEYTFDARRKSSRAGEALDRNLWNKLAEMGVLGLTVPAD
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
FGGFGEGAASQLVVQRELGRGLVLEPVTPSGVMSAAILSAYGSLQQKEEWLPAIASGERI
CCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEE
VTLAYLEPTTRYRPETARASAERSGSGYVLNGTKSLVWHGASADAYLLTARIAGSNDVAL
EEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEEEEEECCCCCEEE
FLVPRDSAGLTVTGYPTIDGLRAADLSLQNVTVSADALVGQPADGLAALGVGMEHGVAAL
EEEECCCCCEEEECCCCCCCCCCCCCEECEEEEEHHHHCCCCCCCHHHHCCCHHHHHHHH
CAEGAGAMEKLIEITGEYLATRQQFGKPLAAFQALQHRMADMLVQKELALSMAYVAVQAI
HHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DETDPARRRRMLSAAKVTLARAGRYVGQQAVQLHGGMGMTDELSVGDYFKRLTMLDQLLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
DSDYHLQRFGEVMETAA
CCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFTYSEEQQMLADSLRRFIDTEYTFDARRKSSRAGEALDRNLWNKLAEMGVLGLTVPAD
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
FGGFGEGAASQLVVQRELGRGLVLEPVTPSGVMSAAILSAYGSLQQKEEWLPAIASGERI
CCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEE
VTLAYLEPTTRYRPETARASAERSGSGYVLNGTKSLVWHGASADAYLLTARIAGSNDVAL
EEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEEEEEECCCCCEEE
FLVPRDSAGLTVTGYPTIDGLRAADLSLQNVTVSADALVGQPADGLAALGVGMEHGVAAL
EEEECCCCCEEEECCCCCCCCCCCCCEECEEEEEHHHHCCCCCCCHHHHCCCHHHHHHHH
CAEGAGAMEKLIEITGEYLATRQQFGKPLAAFQALQHRMADMLVQKELALSMAYVAVQAI
HHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DETDPARRRRMLSAAKVTLARAGRYVGQQAVQLHGGMGMTDELSVGDYFKRLTMLDQLLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
DSDYHLQRFGEVMETAA
CCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]