BacMap

Definition	Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence.
Accession	NC_007348
Length	2,726,152

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The map label for this gene is yjgI [H]

Identifier: 73537321

GI number: 73537321

Start: 23745

End: 24488

Strand: Reverse

Name: yjgI [H]

Synonym: Reut_B3486

Alternate gene names: 73537321

Gene position: 24488-23745 (Counterclockwise)

Preceding gene: 73537327

Following gene: 73537320

Centisome position: 0.9

GC content: 65.86

Gene sequence:

>744_bases
ATGAGCACCACTCTTTCCGGCAAGATTGCCTTCGTCACCGGCGGCGCGCGCGGTATCGGCGCTTCGGTCGTACGCCGGCT
GGCGCGCGAAGGCGCGGCTGTGGCCTTTACCTATCAGAGTTCGGGAGCTGGTGCGCACGCACTGGCGGAGGAAATCCATG
CCGCCGGCGGACGCGCACTGGCCTTCCAGGCTGATGCGGCGGACGCGGCTTCCGTGACGCGTGCCGTCGATGATGCCGCC
CGGCAGTTCGGCAAGATCGACATCCTCGTCAATAGTGCCGGCGTGCTGCTGCTGGGCCCGGTCGACGACTTTTCGCTCGA
AGATTTCGACAAGACGCTTGCGGTGAATGTGCGCGGCGTGTTTGTGGCAGCCAAGGCAGCACTGCCCCACATGGGCGACG
GCGGCCGCATCATCAATATCGGCAGCGTCAACGCGGATCGCATTCCGTTCGCCGGAGGCAGCGCCTATGCCATGAGCAAG
GCCGCGCTGAAGGGCCTGGTGCAGGGCATGGCGCGCGATCTCGGACCCAGGGGCATTACCGTGAACAACGTGCAGCCGGG
TCCGACCAACACCGACATGAACCCCGAGCACAGCGACTTTGCGACATCGCTGCATGGCCTGATGGCATTGCAGCGCCACG
CGCGGCCCGAAGAGATCGCTGGCATGGTGGCGTACCTCGCCGGCCCGGAAGCAGGCTTCGTCACCGGTGCCAGCCTGAAT
ATCGACGGTGGCTTCGCCGCCTGA

Upstream 100 bases:

>100_bases
CAATGGTTGAAAAAAATGATCCACAGCGATGCCTACCGGTAGGGGAATCCACTGACCATACTTCGACGCACCAACCCCAA
CGCTTTCAGGAGCAAACATC

Downstream 100 bases:

>100_bases
GTTGCCCCCACCTTCGCAGGGATACGGTTCATTGCGTGGATACCGTCATTGCATGCAGTGTGCTACTGCGGCACACGATT
CCCCAATCATTGCCCGATCG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSTTLSGKIAFVTGGARGIGASVVRRLAREGAAVAFTYQSSGAGAHALAEEIHAAGGRALAFQADAADAASVTRAVDDAA
RQFGKIDILVNSAGVLLLGPVDDFSLEDFDKTLAVNVRGVFVAAKAALPHMGDGGRIINIGSVNADRIPFAGGSAYAMSK
AALKGLVQGMARDLGPRGITVNNVQPGPTNTDMNPEHSDFATSLHGLMALQRHARPEEIAGMVAYLAGPEAGFVTGASLN
IDGGFAA

Sequences:

>Translated_247_residues
MSTTLSGKIAFVTGGARGIGASVVRRLAREGAAVAFTYQSSGAGAHALAEEIHAAGGRALAFQADAADAASVTRAVDDAA
RQFGKIDILVNSAGVLLLGPVDDFSLEDFDKTLAVNVRGVFVAAKAALPHMGDGGRIINIGSVNADRIPFAGGSAYAMSK
AALKGLVQGMARDLGPRGITVNNVQPGPTNTDMNPEHSDFATSLHGLMALQRHARPEEIAGMVAYLAGPEAGFVTGASLN
IDGGFAA
>Mature_246_residues
STTLSGKIAFVTGGARGIGASVVRRLAREGAAVAFTYQSSGAGAHALAEEIHAAGGRALAFQADAADAASVTRAVDDAAR
QFGKIDILVNSAGVLLLGPVDDFSLEDFDKTLAVNVRGVFVAAKAALPHMGDGGRIINIGSVNADRIPFAGGSAYAMSKA
ALKGLVQGMARDLGPRGITVNNVQPGPTNTDMNPEHSDFATSLHGLMALQRHARPEEIAGMVAYLAGPEAGFVTGASLNI
DGGFAA

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=249, Percent_Identity=32.9317269076305, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=32.9501915708812, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=31.8367346938775, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=32, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=32.5, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI19923817, Length=253, Percent_Identity=30.8300395256917, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI40254986, Length=192, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=32.156862745098, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=30.1587301587302, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=31.2252964426877, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=33.8541666666667, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI31542939, Length=197, Percent_Identity=32.48730964467, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI4758504, Length=259, Percent_Identity=30.5019305019305, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI7706318, Length=200, Percent_Identity=29, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=34.8066298342541, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=26.4248704663212, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI59889578, Length=238, Percent_Identity=28.9915966386555, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI224922801, Length=183, Percent_Identity=31.6939890710383, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI210032110, Length=196, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI83715985, Length=255, Percent_Identity=29.4117647058824, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4504505, Length=237, Percent_Identity=30.379746835443, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI40548397, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI214010158, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI214010156, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI22758144, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI109715829, Length=245, Percent_Identity=26.1224489795918, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI223718074, Length=192, Percent_Identity=30.7291666666667, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI166795268, Length=224, Percent_Identity=27.2321428571429, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=48.9711934156379, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=37.8486055776892, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=35.5371900826446, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=36.9918699186992, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=34.2741935483871, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=30.6772908366534, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1789057, Length=262, Percent_Identity=33.969465648855, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=33.201581027668, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=30.0395256916996, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1789378, Length=245, Percent_Identity=31.4285714285714, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=30.5882352941176, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=33.1983805668016, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787545, Length=259, Percent_Identity=29.3436293436293, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788891, Length=241, Percent_Identity=30.2904564315353, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=33.6032388663968, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=31.0756972111554, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=30.8880308880309, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71982365, Length=189, Percent_Identity=32.8042328042328, Blast_Score=110, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=32.5396825396825, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=31.5789473684211, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=31.2252964426877, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=31.3492063492063, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17531453, Length=271, Percent_Identity=32.4723247232472, Blast_Score=98, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=31.5789473684211, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=32.4427480916031, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=30.8270676691729, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17565030, Length=274, Percent_Identity=31.7518248175182, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=30.9701492537313, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=30.241935483871, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17558628, Length=191, Percent_Identity=32.4607329842932, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=31.8181818181818, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=31.2977099236641, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=257, Percent_Identity=30.7392996108949, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=28.1368821292776, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=29.5019157088123, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=26.2962962962963, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17555706, Length=251, Percent_Identity=29.8804780876494, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=29.5880149812734, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=262, Percent_Identity=28.6259541984733, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=196, Percent_Identity=33.1632653061224, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=28.4090909090909, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=27.8884462151394, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=27.6264591439689, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=27.7566539923954, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=264, Percent_Identity=30.3030303030303, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=28.7179487179487, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=254, Percent_Identity=27.1653543307087, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=246, Percent_Identity=26.4227642276423, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=244, Percent_Identity=26.2295081967213, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=26.4822134387352, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=27.4900398406374, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6322861, Length=255, Percent_Identity=25.8823529411765, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=36.144578313253, Blast_Score=134, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=31.4516129032258, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=35.0597609561753, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=35.7723577235772, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24643142, Length=250, Percent_Identity=33.2, Blast_Score=124, Evalue=6e-29,
Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=32.3886639676113, Blast_Score=114, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=31.7269076305221, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=31.9371727748691, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24644337, Length=249, Percent_Identity=30.9236947791165, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17737361, Length=262, Percent_Identity=31.2977099236641, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21356301, Length=265, Percent_Identity=27.9245283018868, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221331218, Length=212, Percent_Identity=31.6037735849057, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24665243, Length=212, Percent_Identity=31.6037735849057, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI116007234, Length=240, Percent_Identity=30.4166666666667, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI221331216, Length=213, Percent_Identity=31.4553990610329, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24665247, Length=213, Percent_Identity=31.4553990610329, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI18859837, Length=233, Percent_Identity=29.6137339055794, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281364892, Length=193, Percent_Identity=26.9430051813472, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007236, Length=234, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21355631, Length=173, Percent_Identity=24.2774566473988, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24641232, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25071; Mature: 24939

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTLSGKIAFVTGGARGIGASVVRRLAREGAAVAFTYQSSGAGAHALAEEIHAAGGRAL
CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEE
AFQADAADAASVTRAVDDAARQFGKIDILVNSAGVLLLGPVDDFSLEDFDKTLAVNVRGV
EEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCHHCCCCEEEEEEEEE
FVAAKAALPHMGDGGRIINIGSVNADRIPFAGGSAYAMSKAALKGLVQGMARDLGPRGIT
EEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
VNNVQPGPTNTDMNPEHSDFATSLHGLMALQRHARPEEIAGMVAYLAGPEAGFVTGASLN
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCEEE
IDGGFAA
CCCCCCC
>Mature Secondary Structure 
STTLSGKIAFVTGGARGIGASVVRRLAREGAAVAFTYQSSGAGAHALAEEIHAAGGRAL
CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEE
AFQADAADAASVTRAVDDAARQFGKIDILVNSAGVLLLGPVDDFSLEDFDKTLAVNVRGV
EEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCHHCCCCEEEEEEEEE
FVAAKAALPHMGDGGRIINIGSVNADRIPFAGGSAYAMSKAALKGLVQGMARDLGPRGIT
EEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
VNNVQPGPTNTDMNPEHSDFATSLHGLMALQRHARPEEIAGMVAYLAGPEAGFVTGASLN
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCEEE
IDGGFAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]