| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is 73537312
Identifier: 73537312
GI number: 73537312
Start: 14340
End: 14825
Strand: Reverse
Name: 73537312
Synonym: Reut_B3477
Alternate gene names: NA
Gene position: 14825-14340 (Counterclockwise)
Preceding gene: 73537313
Following gene: 73537310
Centisome position: 0.54
GC content: 68.52
Gene sequence:
>486_bases ATGACGATCGACACACCTGAAGCGCGGCTTGTCGCCGCCGGCTTTGATCTGCCCGCGGCGCCCGCACCGCGCGGCAACTA CGCGCCCTTCTGCGCGATACCGGTCGGCCCTTGCCGCTGGGTGTCGATCTCTGGGCAGGTCTGTCGCGAGGACGGCGTGG CCATGTCCGGGCTATGCCGGACTAGCGACGACCTGGAGCCCGCGCGCCGGGCTGCCGAAGTCTCCATCCTCAACGCGCTT GCAGCCCTGCAACTGGCATGCGATGGCGAGCTGTCCCGCGTGACGCAGATCGTCCGTCTGCATGGATTCATTCGCGCCTC GGCGGACTTTGGCAGCCACCCGGCGGTACTCGACGCGGCCTCCGCTGTCCTGCGCGTCGCGTTCCCCGATCAGCCGCTCC CGGCACGCAGCGCGCTGGGTGTGGCCAGCCTGCCTGATTGCGCATGGACGGAAATCGAAATCGATGCCATCGTGACCGCC CCCTGA
Upstream 100 bases:
>100_bases CCATGGGCAGCCCGTCGGAAATCCTCGTTGCGCCACGCCGCTCAGATGATGGCGAGCCTGACGGCTGCTGGCTCAGCGGC AAGGCAGCATGGAGCCAGGA
Downstream 100 bases:
>100_bases CGCTACCGGATACCGCGGCTATGGCGCATCGGGCAACTCACGCAGCAGCCGATGCAGATGTCCGCTGGAGGCAAAGCCCA GATGCACGCTGACGCTGGCC
Product: endoribonuclease L-PSP
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Transcriptional Regulator; Endoribonuclease L-Psp; Translation Initiation Inhibitor Protein; Translation Initiation Inhibitor YjgF Family; L-PSP Family Endoribonuclease; Endoribonuclease; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Endoribonuclease L-PSP Family; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTIDTPEARLVAAGFDLPAAPAPRGNYAPFCAIPVGPCRWVSISGQVCREDGVAMSGLCRTSDDLEPARRAAEVSILNAL AALQLACDGELSRVTQIVRLHGFIRASADFGSHPAVLDAASAVLRVAFPDQPLPARSALGVASLPDCAWTEIEIDAIVTA P
Sequences:
>Translated_161_residues MTIDTPEARLVAAGFDLPAAPAPRGNYAPFCAIPVGPCRWVSISGQVCREDGVAMSGLCRTSDDLEPARRAAEVSILNAL AALQLACDGELSRVTQIVRLHGFIRASADFGSHPAVLDAASAVLRVAFPDQPLPARSALGVASLPDCAWTEIEIDAIVTA P >Mature_160_residues TIDTPEARLVAAGFDLPAAPAPRGNYAPFCAIPVGPCRWVSISGQVCREDGVAMSGLCRTSDDLEPARRAAEVSILNALA ALQLACDGELSRVTQIVRLHGFIRASADFGSHPAVLDAASAVLRVAFPDQPLPARSALGVASLPDCAWTEIEIDAIVTAP
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16790; Mature: 16659
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS01094 UPF0076
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDTPEARLVAAGFDLPAAPAPRGNYAPFCAIPVGPCRWVSISGQVCREDGVAMSGLCR CCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEECCCCCEEECCCC TSDDLEPARRAAEVSILNALAALQLACDGELSRVTQIVRLHGFIRASADFGSHPAVLDAA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHH SAVLRVAFPDQPLPARSALGVASLPDCAWTEIEIDAIVTAP HHHEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure TIDTPEARLVAAGFDLPAAPAPRGNYAPFCAIPVGPCRWVSISGQVCREDGVAMSGLCR CCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEECCCCCEEECCCC TSDDLEPARRAAEVSILNALAALQLACDGELSRVTQIVRLHGFIRASADFGSHPAVLDAA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHH SAVLRVAFPDQPLPARSALGVASLPDCAWTEIEIDAIVTAP HHHEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA