Click here to switch to the map view.

The map label for this gene is ypjC [H]

Identifier: 71911623

GI number: 71911623

Start: 1778837

End: 1779709

Strand: Reverse

Name: ypjC [H]

Synonym: M5005_Spy_1810

Alternate gene names: 71911623

Gene position: 1779709-1778837 (Counterclockwise)

Preceding gene: 71911624

Following gene: 71911620

Centisome position: 96.8

GC content: 39.52

Gene sequence:

>873_bases
ATGGCACATCACGATAAATTGACTAAACTACTAAAACTGTTTTTGATTGCCCTAGGTGTAGCCATTTATACCTTCGGTTT
TGTTAATTTTAACATGGCTAATGCTTTGGCTGAAGGTGGTGTGGCAGGAATAACCTTGATTTTACACGCGCATTTTGGGA
TTAATCCTGCTTACTCTTCTCTCTTATTTAATCTTCCACTTTTTATTTTAGGGGCAAAGATTTTTGGGAAGCGTTCTTTG
GCTCTAACCATCTATGGAACAGTTCTGATGTCCGCTTTTATCTGGATGTGGCAAAAAGTTCCTATCGAACTTGGCTTGGA
AAATGACATGATGTTGGTGGCTGTAGTGGCAGGTCTCTTTTCAGGGATTGGGAGTGGCATTGTTTTTCGCTATGGTGCAA
CCACAGGTGGAACGGATATTATTGGTCGCATTGCAGAAGAAAAATTTGGAGCTAAGCTAGGTCAAACTTTGCTTTTGGTG
GATGCTCTTGTATTGACAGCTTCGTTGACTTATGTGGATTTAAAACACATGCTTTACACTTTGGTGGCAAGCTTTGTTTT
TAGCCAAATGATTAGTGTGGTTCAAAATGGTGGTTACACTATCCGTGGAATGATTATTATTACCAAGCATTCAGAGGCTG
CCGCTCAAGCTATCCTAACCGAAATCAATCGTGGAGTGACTTACTTGAAAGGTCAAGGAGCTTACTCTGGTAATGATTAC
AATATCATGTATGTGACCTTGAACCCAACTGAAGTTCGGGAAGTCAAACGTATTTTAGCTGGTTTGGATCCAGATGCCTT
TATCTCCATTATTGATGTGGACGAAGTTATTAGCTCTGATTTTAAAATTCGCCGAAGAAATTATGATAAATAA

Upstream 100 bases:

>100_bases
AGTCAATAGCCCAGAATTTTTAACTATTAAAAGCAAATACCATAAAAAGAGAAAATAAATGAGCATTAGAGTTGCCTGCG
AAGAATAGTGAGGATAAAGG

Downstream 100 bases:

>100_bases
AAATACAGGTCAAACAGCCTGTATTTTTATTTTGGTCCCCCACTTAAGAAACTACCAAGCATAATAGCTGATATAGCAGT
TCCCTTGTAATGGCTAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MAHHDKLTKLLKLFLIALGVAIYTFGFVNFNMANALAEGGVAGITLILHAHFGINPAYSSLLFNLPLFILGAKIFGKRSL
ALTIYGTVLMSAFIWMWQKVPIELGLENDMMLVAVVAGLFSGIGSGIVFRYGATTGGTDIIGRIAEEKFGAKLGQTLLLV
DALVLTASLTYVDLKHMLYTLVASFVFSQMISVVQNGGYTIRGMIIITKHSEAAAQAILTEINRGVTYLKGQGAYSGNDY
NIMYVTLNPTEVREVKRILAGLDPDAFISIIDVDEVISSDFKIRRRNYDK

Sequences:

>Translated_290_residues
MAHHDKLTKLLKLFLIALGVAIYTFGFVNFNMANALAEGGVAGITLILHAHFGINPAYSSLLFNLPLFILGAKIFGKRSL
ALTIYGTVLMSAFIWMWQKVPIELGLENDMMLVAVVAGLFSGIGSGIVFRYGATTGGTDIIGRIAEEKFGAKLGQTLLLV
DALVLTASLTYVDLKHMLYTLVASFVFSQMISVVQNGGYTIRGMIIITKHSEAAAQAILTEINRGVTYLKGQGAYSGNDY
NIMYVTLNPTEVREVKRILAGLDPDAFISIIDVDEVISSDFKIRRRNYDK
>Mature_289_residues
AHHDKLTKLLKLFLIALGVAIYTFGFVNFNMANALAEGGVAGITLILHAHFGINPAYSSLLFNLPLFILGAKIFGKRSLA
LTIYGTVLMSAFIWMWQKVPIELGLENDMMLVAVVAGLFSGIGSGIVFRYGATTGGTDIIGRIAEEKFGAKLGQTLLLVD
ALVLTASLTYVDLKHMLYTLVASFVFSQMISVVQNGGYTIRGMIIITKHSEAAAQAILTEINRGVTYLKGQGAYSGNDYN
IMYVTLNPTEVREVKRILAGLDPDAFISIIDVDEVISSDFKIRRRNYDK

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 31670; Mature: 31539

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHHDKLTKLLKLFLIALGVAIYTFGFVNFNMANALAEGGVAGITLILHAHFGINPAYSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCHHHHH
LLFNLPLFILGAKIFGKRSLALTIYGTVLMSAFIWMWQKVPIELGLENDMMLVAVVAGLF
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
SGIGSGIVFRYGATTGGTDIIGRIAEEKFGAKLGQTLLLVDALVLTASLTYVDLKHMLYT
HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVASFVFSQMISVVQNGGYTIRGMIIITKHSEAAAQAILTEINRGVTYLKGQGAYSGNDY
HHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCCCE
NIMYVTLNPTEVREVKRILAGLDPDAFISIIDVDEVISSDFKIRRRNYDK
EEEEEEECHHHHHHHHHHHHCCCHHHEEEEEEHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure 
AHHDKLTKLLKLFLIALGVAIYTFGFVNFNMANALAEGGVAGITLILHAHFGINPAYSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCHHHHH
LLFNLPLFILGAKIFGKRSLALTIYGTVLMSAFIWMWQKVPIELGLENDMMLVAVVAGLF
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
SGIGSGIVFRYGATTGGTDIIGRIAEEKFGAKLGQTLLLVDALVLTASLTYVDLKHMLYT
HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVASFVFSQMISVVQNGGYTIRGMIIITKHSEAAAQAILTEINRGVTYLKGQGAYSGNDY
HHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCCCE
NIMYVTLNPTEVREVKRILAGLDPDAFISIIDVDEVISSDFKIRRRNYDK
EEEEEEECHHHHHHHHHHHHCCCHHHEEEEEEHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]