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The map label for this gene is ydeP [H]

Identifier: 71911599

GI number: 71911599

Start: 1755205

End: 1755372

Strand: Reverse

Name: ydeP [H]

Synonym: M5005_Spy_1786

Alternate gene names: 71911599

Gene position: 1755372-1755205 (Counterclockwise)

Preceding gene: 71911602

Following gene: 71911597

Centisome position: 95.48

GC content: 46.43

Gene sequence:

>168_bases
ATGGAAGCAGACGGATTGGTTCATCGGGAAGTGTATGCAGAAGTGCCACCTCGGGTGGAGTATTCCTTAACAGAAACTGG
GTTGAGCTTAGCTCCTGTTATTGAAGCGATGTCGGATTGGGGCCAAACTTACCAAGAAAAACATGCCGATTTATTTGAAG
AAGGCTAG

Upstream 100 bases:

>100_bases
AATATTAAGAGACTTGCTAAAGGGGACCTTGCGTTTTGGGCAGTTGAAGTCCTCAATAGGTTCGGTCAGTCAAAAGGTAC
TTACTGCCCAATTAAGGGCT

Downstream 100 bases:

>100_bases
AGGAAAGAGTTGTCCGAGCAGACTGAGACTTAGAGAAGCTGAGAGTTTTTAAAAAATGATATTATCACATTCTTTACAGT
TTGATAAAATTACTTTTTTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MEADGLVHREVYAEVPPRVEYSLTETGLSLAPVIEAMSDWGQTYQEKHADLFEEG

Sequences:

>Translated_55_residues
MEADGLVHREVYAEVPPRVEYSLTETGLSLAPVIEAMSDWGQTYQEKHADLFEEG
>Mature_55_residues
MEADGLVHREVYAEVPPRVEYSLTETGLSLAPVIEAMSDWGQTYQEKHADLFEEG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 6196; Mature: 6196

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEADGLVHREVYAEVPPRVEYSLTETGLSLAPVIEAMSDWGQTYQEKHADLFEEG
CCCCCHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEADGLVHREVYAEVPPRVEYSLTETGLSLAPVIEAMSDWGQTYQEKHADLFEEG
CCCCCHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]