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The map label for this gene is yubA [H]

Identifier: 71910551

GI number: 71910551

Start: 740322

End: 741503

Strand: Direct

Name: yubA [H]

Synonym: M5005_Spy_0738

Alternate gene names: 71910551

Gene position: 740322-741503 (Clockwise)

Preceding gene: 71910550

Following gene: 71910552

Centisome position: 40.27

GC content: 38.41

Gene sequence:

>1182_bases
ATGCCCTTAATACCTGAAAAGTCTAGAACAGATAGCTTATTTTACAAATGGTTTTTAAATAATCAAGCTACCATGGCTTT
AGTAATAACACTTTTAGCCTTTTTAACGATTTTTGTTTTTACTAAAATCTCTTTTTTATTTATGCCAGTGATTTCTTTTT
TTGCGGTCATCATGTTGCCCTTGGTTATTTCGACCATTCTGTATTATCTGACCAAACCCTTAGTTGACCTTATTAATCAC
TTGGGCCCGAATCGTACCACCTCTATTTTTATTGTTTTTGGTTTGATTACCTTACTTTTTGTCTGGGCGATTTCAGGCTT
TGTTCCCATGGTACAGACCCAACTTACCAGTTTTATTGAGGATCTGCCCAAATACGTGGGCAAGGTCAATGAAGAAGCCA
ATAAACTTCTTGAAAATGAATGGTTAGTCAGCTATAAGCCCCAACTCCAAGACATGCTTACCCATACAAGTCAAAAGGCT
TTGGATTACGCGCAAAGTTTTTCAAAAAATGCTATTGACTGGGCTGGTAATTTTGCTGGTGCCATTGCTCGGATTACCGT
GGCTATTATTATTTCGCCCTTTATTCTCTTTTATTTTTTACGAGACAGTAGCCACATGAAAAATGGCCTTGTGAATGTCT
TACCTCTCAAATTACGGGTGCCTATGGTTCGAGTCTTGGGAGATATTAACAAGCAATTATCAGGCTATGTGCAAGGGCAG
GTTACGGTTGCAATTGTTGTCGGCTTTATGTTTTCTATCATGTTTAGCCTTGTGGGACTGAAATATGCCATCACTTTTGG
GATTATTGCTGGCTTTCTTAACATGATACCTTACTTAGGAAGTTTCCTTGCCATGATACCTGTTGTGATTATGGCTATGG
TACAAGGCCCATTTATGTTGGTTAAGGTGCTTGTTATCTTTATGATTGAGCAAACCATCGAAGGGCGTTTTGTAGCACCG
CTTGTTTTGGGAAATAAGCTGAGCATTCATCCTATTACCATTATGTTCTTGTTATTGACTGCAGGCTCTATGTTTGGTGT
CTGGGGTGTTTTCCTTGTCATCCCAATCTACGCTTCTGTCAAAGTTGTGATTAAAGAATTATTTGACTGGTACAAAAAAG
TTAGCGGTTTGTATGACGAAGAAGTATTGGTGATTGAGGAGGTTAAGGACCATGTTAAATAG

Upstream 100 bases:

>100_bases
CCAAAACAACCAACTCATGGATAAATCTGTGACCTTTTATTGATTTACCCAGGTTACCAGTAAAACCTATCATTTTCCCA
AAGAAAGGAACCCTATCTTA

Downstream 100 bases:

>100_bases
TGAAAAAATGATTGCTTCCTTGGATCAGCAAGACCTAGCGCACGCTGAAAAATATTTCCAAAAAGCTTTAAAAGAAGATG
ATGCAGATAGTTTAATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MPLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLPLVISTILYYLTKPLVDLINH
LGPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKA
LDYAQSFSKNAIDWAGNFAGAIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQ
VTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAP
LVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK

Sequences:

>Translated_393_residues
MPLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLPLVISTILYYLTKPLVDLINH
LGPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKA
LDYAQSFSKNAIDWAGNFAGAIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQ
VTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAP
LVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK
>Mature_392_residues
PLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLPLVISTILYYLTKPLVDLINHL
GPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL
DYAQSFSKNAIDWAGNFAGAIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQV
TVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAPL
VLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=334, Percent_Identity=28.1437125748503, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI87082271, Length=313, Percent_Identity=20.7667731629393, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 44258; Mature: 44127

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLP
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVISTILYYLTKPLVDLINHLGPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKALDYAQSFSKNAIDWAGNFAG
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQ
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASV
HHHHHHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]