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The map label for this gene is amrA

Identifier: 71910425

GI number: 71910425

Start: 616388

End: 617674

Strand: Direct

Name: amrA

Synonym: M5005_Spy_0612

Alternate gene names: NA

Gene position: 616388-617674 (Clockwise)

Preceding gene: 71910424

Following gene: 71910426

Centisome position: 33.53

GC content: 29.91

Gene sequence:

>1287_bases
ATGATTAATCCTTCAAAACAAAACCAAACGATTTTTTTATGGAATATGTTAGGAAGTTTATCAACAGCTGTAATATCAGT
TATATTACTTATGGTGGTTACTAGGTTACTAACTTCGGCTGATTCAGATATTTACGCCTTTGCCTATTCTTTTGCTAATA
TGATGGTAGTTGTTGGACTTTTTCAGGTTCGTAATTATCAAGCAACAGATATTAATGAAAAATATTCCTTTAGTCAGTAC
TTAGTGGCAAGACTGATGACTTGTTTATTAATGTTAGCCATAACAGTAATTTATTTAACGTTAACTAAGACAGATAGCTA
CAAGAGTACAATTGTCTTTCTAGTCTGTTTCTATAGATCGACAGATGCTTTTTCGGATTTATATCAGGGAATGTTCCAAC
AACATGAACGGCTGGATATTGCAGGTAAATCGCTAGCCTACAGAAATACTCTTATTTTTATGGTGTACACAGCAATAATA
TTATATTCCAAAAATCTTACTTTAGCATTAGTAGCTGTCTGTATAGTTTCATTAGTTTTTATAATGTATTATGACATTGG
TCATTCGAAAAAATTTCAAAAGTTGATGTTTAGTGAATTATTAAGTAATATTTCATTTCAAAACAGTTTAAAGTTATTAA
AAGAAAGTTTTCCACTTTTTCTAAACGGTTTTTTGATTATCTATATTTATACTCAACCAAAATACGCTATTGAACTAATG
ACGACTTTAGGTGAAGTTGCTTTGGGCTCTCAAACAATTTTTAATATTTTATTTATGCCAGCCTTTGTTATGAATTTGCT
AATTTTATTTTTTAGACCTCATATTACACAGATGGCTATTGCTTTAATCAGAGGTCAAATAAAAGAGTTTAATAAGATAC
AAGTTCAATTGTTTGCTTATTTAGGAGTTTTTTCACTGATAGCGTTAGTTGGAAGTGGTTTGTTTGGTATTCCCTTTTTA
TCAATACTATATGGTACTAACCTTACGGATTATTGGGTAGATTTTATGTTGATTATGCTAGGAGGCTCGATTGGTAGTTT
TGCGACAGTTATCGATAATATCTTAACCGCTATGAGAAAACAGCAACTTCTTCTTATTCCATATACAGGAGGATTTTTGA
TTTCGTTATTAATTACCAATCTTTTTGTTATGAAATATCATATTTTAGGAGCTGCTTTGAGCTTTTTAATAACAATGTTG
GTTTGGTTGGGATTATCCATTATGATTTATCTATTTATTATGAATAGATTTAAGAAGGGAAGAGTTAATGCAACAATCTA
TGACTAA

Upstream 100 bases:

>100_bases
TTAGCTATTATTTTTTCACTGACTAATAATATTTCACTTCAAAATGATAAAGTAAAACGTCTGACCCAAGAAGTGGCCCT
TATGAAAAAAGAGAAAACCA

Downstream 100 bases:

>100_bases
AGTTAAATATCTTTGGAAAGAAAATAATAACTATATTTATTCGACTTTTTTGACATTACTTCTGACAGTTATTTTATATG
CCAATAGTTTAAATCTACCT

Product: transcriptional activator

Products: NA

Alternate protein names: Exopolysaccharide Biosynthesis Protein; Transcriptional Activator; Polysaccharide Biosynthesis Protein Transporter; Polysaccharides Export Protein; Polysaccharide/Teichoic Acid Transporter

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MINPSKQNQTIFLWNMLGSLSTAVISVILLMVVTRLLTSADSDIYAFAYSFANMMVVVGLFQVRNYQATDINEKYSFSQY
LVARLMTCLLMLAITVIYLTLTKTDSYKSTIVFLVCFYRSTDAFSDLYQGMFQQHERLDIAGKSLAYRNTLIFMVYTAII
LYSKNLTLALVAVCIVSLVFIMYYDIGHSKKFQKLMFSELLSNISFQNSLKLLKESFPLFLNGFLIIYIYTQPKYAIELM
TTLGEVALGSQTIFNILFMPAFVMNLLILFFRPHITQMAIALIRGQIKEFNKIQVQLFAYLGVFSLIALVGSGLFGIPFL
SILYGTNLTDYWVDFMLIMLGGSIGSFATVIDNILTAMRKQQLLLIPYTGGFLISLLITNLFVMKYHILGAALSFLITML
VWLGLSIMIYLFIMNRFKKGRVNATIYD

Sequences:

>Translated_428_residues
MINPSKQNQTIFLWNMLGSLSTAVISVILLMVVTRLLTSADSDIYAFAYSFANMMVVVGLFQVRNYQATDINEKYSFSQY
LVARLMTCLLMLAITVIYLTLTKTDSYKSTIVFLVCFYRSTDAFSDLYQGMFQQHERLDIAGKSLAYRNTLIFMVYTAII
LYSKNLTLALVAVCIVSLVFIMYYDIGHSKKFQKLMFSELLSNISFQNSLKLLKESFPLFLNGFLIIYIYTQPKYAIELM
TTLGEVALGSQTIFNILFMPAFVMNLLILFFRPHITQMAIALIRGQIKEFNKIQVQLFAYLGVFSLIALVGSGLFGIPFL
SILYGTNLTDYWVDFMLIMLGGSIGSFATVIDNILTAMRKQQLLLIPYTGGFLISLLITNLFVMKYHILGAALSFLITML
VWLGLSIMIYLFIMNRFKKGRVNATIYD
>Mature_428_residues
MINPSKQNQTIFLWNMLGSLSTAVISVILLMVVTRLLTSADSDIYAFAYSFANMMVVVGLFQVRNYQATDINEKYSFSQY
LVARLMTCLLMLAITVIYLTLTKTDSYKSTIVFLVCFYRSTDAFSDLYQGMFQQHERLDIAGKSLAYRNTLIFMVYTAII
LYSKNLTLALVAVCIVSLVFIMYYDIGHSKKFQKLMFSELLSNISFQNSLKLLKESFPLFLNGFLIIYIYTQPKYAIELM
TTLGEVALGSQTIFNILFMPAFVMNLLILFFRPHITQMAIALIRGQIKEFNKIQVQLFAYLGVFSLIALVGSGLFGIPFL
SILYGTNLTDYWVDFMLIMLGGSIGSFATVIDNILTAMRKQQLLLIPYTGGFLISLLITNLFVMKYHILGAALSFLITML
VWLGLSIMIYLFIMNRFKKGRVNATIYD

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48690; Mature: 48690

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPSKQNQTIFLWNMLGSLSTAVISVILLMVVTRLLTSADSDIYAFAYSFANMMVVVGL
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FQVRNYQATDINEKYSFSQYLVARLMTCLLMLAITVIYLTLTKTDSYKSTIVFLVCFYRS
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
TDAFSDLYQGMFQQHERLDIAGKSLAYRNTLIFMVYTAIILYSKNLTLALVAVCIVSLVF
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IMYYDIGHSKKFQKLMFSELLSNISFQNSLKLLKESFPLFLNGFLIIYIYTQPKYAIELM
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCEEEEEEEECCHHHHHHH
TTLGEVALGSQTIFNILFMPAFVMNLLILFFRPHITQMAIALIRGQIKEFNKIQVQLFAY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVFSLIALVGSGLFGIPFLSILYGTNLTDYWVDFMLIMLGGSIGSFATVIDNILTAMRK
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QQLLLIPYTGGFLISLLITNLFVMKYHILGAALSFLITMLVWLGLSIMIYLFIMNRFKKG
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RVNATIYD
CCCEEECC
>Mature Secondary Structure
MINPSKQNQTIFLWNMLGSLSTAVISVILLMVVTRLLTSADSDIYAFAYSFANMMVVVGL
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FQVRNYQATDINEKYSFSQYLVARLMTCLLMLAITVIYLTLTKTDSYKSTIVFLVCFYRS
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
TDAFSDLYQGMFQQHERLDIAGKSLAYRNTLIFMVYTAIILYSKNLTLALVAVCIVSLVF
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IMYYDIGHSKKFQKLMFSELLSNISFQNSLKLLKESFPLFLNGFLIIYIYTQPKYAIELM
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCEEEEEEEECCHHHHHHH
TTLGEVALGSQTIFNILFMPAFVMNLLILFFRPHITQMAIALIRGQIKEFNKIQVQLFAY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVFSLIALVGSGLFGIPFLSILYGTNLTDYWVDFMLIMLGGSIGSFATVIDNILTAMRK
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QQLLLIPYTGGFLISLLITNLFVMKYHILGAALSFLITMLVWLGLSIMIYLFIMNRFKKG
CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RVNATIYD
CCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA