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The map label for this gene is oxaA1 [H]

Identifier: 71910022

GI number: 71910022

Start: 215141

End: 215950

Strand: Direct

Name: oxaA1 [H]

Synonym: M5005_Spy_0208

Alternate gene names: 71910022

Gene position: 215141-215950 (Clockwise)

Preceding gene: 71910021

Following gene: 71910023

Centisome position: 11.7

GC content: 40.37

Gene sequence:

>810_bases
GTGAAGAAAAACATTAAAATTGCAAGAATAGTCCCCTTAGTTCTATTATTAGTGGCCTGTGGTCGTGGTGAGGTAACGGC
ACAATCATCTAGTGGTTGGGACCAGTTGGTTTACTTATTTGCCAGAGCAATTCAATGGCTTTCCTTTGATGGTTCAATTG
GTGTTGGCATTATTCTTTTTACCCTTACTATCCGTCTCATGCTCATGCCTTTGTTTAACATGCAAATCAAATCAAGCCAG
AAGATGCAAGACATCCAACCTGAGCTTAGAGAATTGCAAAGGAAATACGCTGGTAAAGACACACAAACGCGGATGAAGTT
GGCTGAAGAAAGTCAAGCCCTTTACAAAAAATATGGGGTTAACCCTTATGCTAGTCTCTTACCCCTCTTAATTCAGATGC
CAGTTATGATTGCCTTATTCCAAGCCTTGACACGGGTATCTTTCTTAAAAACAGGGACTTTCTTGTGGGTGGAATTGGCA
CAACATGATCATTTGTACCTTTTACCAGTTTTGGCAGCTGTCTTCACTTTCTTGTCCACTTGGTTGACCAATCTAGCGGC
TAAAGAAAAAAATGTCATGATGACTGTTATGATTTATGTGATGCCGCTAATGATCTTTTTCATGGGCTTTAACTTGGCTA
GTGGAGTAGTGCTCTATTGGACGGTCTCCAATGCCTTTCAAGTGGTACAACTACTGTTATTAAACAATCCTTTTAAGATT
ATTGCGGAAAGACAACGTCTTGCCAATGAAGAAAAAGAACGCCGTCTTCGTGAACGTCGTGCTCGTAAAAAAGCAATGAA
GAGAAAATAG

Upstream 100 bases:

>100_bases
ATTGCCCGTAAGGGTGTCGAGTCTTTGGAGTATCAAGAGCTTCAACAAAATTTACATCATGTTTTAAAGTTAGCACAATT
GCTTGAGAAAGGTTTTGAGA

Downstream 100 bases:

>100_bases
GAGTTTAGGTTATGGTATTATTTACAGGAAAAACAGTCGAAGAAGCTATCGAAACAGGACTTCAAGAGTTAGGGTTATCA
CGCCTTAAAGCGCATATCAA

Product: 60 kDa inner membrane protein YIDC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKKNIKIARIVPLVLLLVACGRGEVTAQSSSGWDQLVYLFARAIQWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQ
KMQDIQPELRELQRKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFLWVELA
QHDHLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLNNPFKI
IAERQRLANEEKERRLRERRARKKAMKRK

Sequences:

>Translated_269_residues
MKKNIKIARIVPLVLLLVACGRGEVTAQSSSGWDQLVYLFARAIQWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQ
KMQDIQPELRELQRKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFLWVELA
QHDHLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLNNPFKI
IAERQRLANEEKERRLRERRARKKAMKRK
>Mature_269_residues
MKKNIKIARIVPLVLLLVACGRGEVTAQSSSGWDQLVYLFARAIQWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQ
KMQDIQPELRELQRKYAGKDTQTRMKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFLWVELA
QHDHLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLNNPFKI
IAERQRLANEEKERRLRERRARKKAMKRK

Specific function: Required for the insertion of integral membrane proteins into the membrane. May also be involved in protein secretion processes [H]

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=229, Percent_Identity=31.8777292576419, Blast_Score=96, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6321002, Length=194, Percent_Identity=27.319587628866, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24662345, Length=201, Percent_Identity=26.865671641791, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356443, Length=201, Percent_Identity=26.865671641791, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708
- InterPro:   IPR023060 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 31012; Mature: 31012

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIKIARIVPLVLLLVACGRGEVTAQSSSGWDQLVYLFARAIQWLSFDGSIGVGIILF
CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQRKYAGKDTQTRMKLAEESQALYKKYGV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
NPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFLWVELAQHDHLYLLPVLAAVFTFLST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHH
WLTNLAAKEKNVMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLNNPFKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCCHHH
IAERQRLANEEKERRLRERRARKKAMKRK
HHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKNIKIARIVPLVLLLVACGRGEVTAQSSSGWDQLVYLFARAIQWLSFDGSIGVGIILF
CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQRKYAGKDTQTRMKLAEESQALYKKYGV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
NPYASLLPLLIQMPVMIALFQALTRVSFLKTGTFLWVELAQHDHLYLLPVLAAVFTFLST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHH
WLTNLAAKEKNVMMTVMIYVMPLMIFFMGFNLASGVVLYWTVSNAFQVVQLLLLNNPFKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCCHHH
IAERQRLANEEKERRLRERRARKKAMKRK
HHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]