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The map label for this gene is licR [H]

Identifier: 71909969

GI number: 71909969

Start: 165586

End: 167232

Strand: Direct

Name: licR [H]

Synonym: M5005_Spy_0155

Alternate gene names: 71909969

Gene position: 165586-167232 (Clockwise)

Preceding gene: 71909968

Following gene: 71909970

Centisome position: 9.01

GC content: 36.85

Gene sequence:

>1647_bases
ATGATGATTTTAGATAAAAAGAGTTATGACTTGCTGTCTTATTTACTTAAACTAGAAACACCTGAGACAGTTATGGCCAT
TTCTCATGCTTTAAATCAGTCACGTCGTAAAGTTTATTACCAGCTTGACAAAATTAATCAGGCTTTGCCAAAGGGAGTAG
ATCAGATTATCTCTTATCCTAGACTTGGCATTCTTTTAACAGCTGATCAAAAAGCTGCTTGTCGCTTATTATTAGAAGAA
GTGACTGATTATAATTATGTCATGAAAAGTGATGAGCGCAGACGCCTATCCTCGATTTATATTGCGGTTTCCACTGAGCG
CGTGACCATTGATAAACTGATGCAGATCAATGATGTGTCTCGTAACACGATTTTAAATGACCTGACTGAGTTAAGGGAAG
AACTGGAAGACAAACAATACAAGATTCAGCTTCATGCGACAAAGGCTAGGGGATATTATTTTGGTTGTCATCCAATGGCT
CTTATTCAATACCTGTACAAATTGTTAGTGGACGTTTACCAAGGTGGCAATACTAGCTTTATTGATATATTCAACCGTAA
ACTCTCAGAGATACAAGGCTTATCGGTTTATTTTTCTAAAGATATTTTGACCTATTTTCATGAGTATCTCTTTTTATCTC
AAGCTAGTTTAGGAAAGACAATTAATACCCAAGATAGCCAATTCATGTTGCAGATTTTACCTTTCATGCTTTTAAGTTAT
CGTAATATGCGTCTTGATTCAGAAACAAAGTCTGCTCTTAAACAAGAATTTCATTTGATTTGGAAACGTAAAGAATATCA
CATTGCTCAGGATTTAGCTAGAGAGCTTTACCATAATTTTAAGCTTCATTTGGATGATATCGAAGTTAGTATGGTAGCGA
TGTTGATGTTGTCTTTTCGAAAAGATCAAGATCATCACGTGGAAAGTCAAGATTATGACGACATGCGAGCAACCATTAGT
CACTTTATTGACCAGTTGGAGAGCCGTTATCAGTTACATTTCACGCATAAACAGGATTTGCTGAAGCAGTTGACGACCCA
CTGTAAGGCGCTCGTTTACCGTAAAGCTTATGGGATTTTTTTAGTTAATCCCTTAACAGACCATATTAAAGAAAAATACG
AAGAATTGTTTGCTATGACTCAATCTTGTGCCACTATTTTGGAACAAGATTGGACGATTAGCTTGACAGACGATGATATT
GCCTACTTGACTATCCATCTTGGGGGAGAGCTGCGTCACAATAATACAGAGCAAGAAAAGACCAAACTCGTTATTGTTTC
AGATGATGGGATAGGCATTCAAAAGTTATTGTTCAAACAGTGTCAAAGGTATCTAGCAAATGGTCAGATTGAAGCTGTTT
TTACGACAGAACAGTATCAGAGTGTTTACGACCTTTTAGCAGTCGATATGATTGTTGCTACTACAGATACGCTAAAGACT
AAAATCCCGATGCTTATTGTTAACCCTATTTTAAGTGACGATGATATCATCAAATTGATACGCTTTTCAAAGCAAGGACG
CTTGAGTGAGCACTCCCGCTTTTCTACAGAGCTCACAAAAGCTATTGAAGCTGTTGTAAAAGATGAATCAGATCGTTATG
CCTTGGTTTCTAAAATTGAAAAACTCATTCATCGCGAGCTGCTATGA

Upstream 100 bases:

>100_bases
CGAATCTTATTATGGTGAGTTTTTCAAAACTTGGCTGCGCAGTCACTGAAATCATGATAAAATAAGCAAGGATGGATTTT
CAGAGAGGAGGTTTGTAAAC

Downstream 100 bases:

>100_bases
GTAAGTGTTAAGTCGTCAAAGTACCTCAGTTTTCTATGACATAGAAAAATATAACTGAGGTTTTTAATATAGCTTTGAAT
ACAGTATTGATGCAAGATAC

Product: BigG family transcription antiterminator

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MMILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYPRLGILLTADQKAACRLLLEE
VTDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVSRNTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMA
LIQYLYKLLVDVYQGGNTSFIDIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSY
RNMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRKDQDHHVESQDYDDMRATIS
HFIDQLESRYQLHFTHKQDLLKQLTTHCKALVYRKAYGIFLVNPLTDHIKEKYEELFAMTQSCATILEQDWTISLTDDDI
AYLTIHLGGELRHNNTEQEKTKLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKT
KIPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEKLIHRELL

Sequences:

>Translated_548_residues
MMILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYPRLGILLTADQKAACRLLLEE
VTDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVSRNTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMA
LIQYLYKLLVDVYQGGNTSFIDIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSY
RNMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRKDQDHHVESQDYDDMRATIS
HFIDQLESRYQLHFTHKQDLLKQLTTHCKALVYRKAYGIFLVNPLTDHIKEKYEELFAMTQSCATILEQDWTISLTDDDI
AYLTIHLGGELRHNNTEQEKTKLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKT
KIPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEKLIHRELL
>Mature_548_residues
MMILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYPRLGILLTADQKAACRLLLEE
VTDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVSRNTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMA
LIQYLYKLLVDVYQGGNTSFIDIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSY
RNMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRKDQDHHVESQDYDDMRATIS
HFIDQLESRYQLHFTHKQDLLKQLTTHCKALVYRKAYGIFLVNPLTDHIKEKYEELFAMTQSCATILEQDWTISLTDDDI
AYLTIHLGGELRHNNTEQEKTKLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKT
KIPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEKLIHRELL

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 64049; Mature: 64049

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYP
CEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLGILLTADQKAACRLLLEEVTDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVS
CCEEEEECCCHHHHHHHHHHHCCCHHHCCCCHHHHHEEEEEEEECCEEEHHHHHHHHCCH
RNTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMALIQYLYKLLVDVYQGGNTSF
HHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCH
IDIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RNMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHC
KDQDHHVESQDYDDMRATISHFIDQLESRYQLHFTHKQDLLKQLTTHCKALVYRKAYGIF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCEE
LVNPLTDHIKEKYEELFAMTQSCATILEQDWTISLTDDDIAYLTIHLGGELRHNNTEQEK
EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCEECCCCCCCHH
TKLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKT
EEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHH
KIPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIE
CCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KLIHRELL
HHHHHHCC
>Mature Secondary Structure
MMILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYP
CEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLGILLTADQKAACRLLLEEVTDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVS
CCEEEEECCCHHHHHHHHHHHCCCHHHCCCCHHHHHEEEEEEEECCEEEHHHHHHHHCCH
RNTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMALIQYLYKLLVDVYQGGNTSF
HHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCH
IDIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RNMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHC
KDQDHHVESQDYDDMRATISHFIDQLESRYQLHFTHKQDLLKQLTTHCKALVYRKAYGIF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCEE
LVNPLTDHIKEKYEELFAMTQSCATILEQDWTISLTDDDIAYLTIHLGGELRHNNTEQEK
EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCEECCCCCCCHH
TKLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKT
EEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHH
KIPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIE
CCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KLIHRELL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]