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The map label for this gene is yheO [C]

Identifier: 71909936

GI number: 71909936

Start: 132119

End: 132799

Strand: Reverse

Name: yheO [C]

Synonym: M5005_Spy_0122

Alternate gene names: 71909936

Gene position: 132799-132119 (Counterclockwise)

Preceding gene: 71909948

Following gene: 71909932

Centisome position: 7.22

GC content: 35.68

Gene sequence:

>681_bases
ATGGATAAAGAAACGCTAAACTACTGGAAAACGGTTATCACATTTCTTCACGATGTCTTAGGTGATAACTATGAAATTAT
TTTACATGTGATTGATAAAAATGATATCTATATTGGAGAACTCGTTAATAGTCATATCAGTGGACGGTCTAAACAGTCTC
CTCTCACCACCTTTGCTCTTGATTTGATTACTAATAAAGTCTATAAGGAAAAAGATTTTGTGACCAATTACAAAGCAATC
GTTAGTCCTCAGCACAAAGAAGTTCGGGGATCTACTTTTTTTATTAAAGATAAAAAGGGTAATCTCGAGGGAATGCTATG
TATTAACTTAGATATTTCAGCCTATCAAGGAGTAGCTAGGGACCTCTTAAAACTTGTCAATCTCAATTTAGAACATTTCA
TCCCAACTGCTAAAGAGCCTAAAACAGTCACACCCCAGCCAGAAGAAGCTGTTGAAATTTTAACCTCTAACATCCAAGAT
ATTATCGGTCAAATTATTGATCCCTCGTTACTGAGACACAATGTACATCTTAGCCAAGATGTCAAAATAGACATTGTTGC
CAAGCTTTATGAAAAAGGGGTCTTTCAGCTAAAAGGAGCCGTCTCAAAAGTCGCTGATATTCTATGTATTTCCGAACCAA
GTGTTTACCGCTACCTTAAAAAAATTGAAGCCGATCAATAA

Upstream 100 bases:

>100_bases
TTTTGATAAAAAATTATTATTAAGGTGATTGGCAATTGTTTTTTAGTCTAAAATGTATTACTATATTTGTAAATAAGAAG
ATAGATATAGGAAGTTTGAC

Downstream 100 bases:

>100_bases
CCAAATCACCATAAAACGCCAGTTAAAAGTATTTCAGATAAGCATCACAATCTCTGATATACCGATGACTGACGTTTTTT
TTACTCAATATGCCTTTATG

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MDKETLNYWKTVITFLHDVLGDNYEIILHVIDKNDIYIGELVNSHISGRSKQSPLTTFALDLITNKVYKEKDFVTNYKAI
VSPQHKEVRGSTFFIKDKKGNLEGMLCINLDISAYQGVARDLLKLVNLNLEHFIPTAKEPKTVTPQPEEAVEILTSNIQD
IIGQIIDPSLLRHNVHLSQDVKIDIVAKLYEKGVFQLKGAVSKVADILCISEPSVYRYLKKIEADQ

Sequences:

>Translated_226_residues
MDKETLNYWKTVITFLHDVLGDNYEIILHVIDKNDIYIGELVNSHISGRSKQSPLTTFALDLITNKVYKEKDFVTNYKAI
VSPQHKEVRGSTFFIKDKKGNLEGMLCINLDISAYQGVARDLLKLVNLNLEHFIPTAKEPKTVTPQPEEAVEILTSNIQD
IIGQIIDPSLLRHNVHLSQDVKIDIVAKLYEKGVFQLKGAVSKVADILCISEPSVYRYLKKIEADQ
>Mature_226_residues
MDKETLNYWKTVITFLHDVLGDNYEIILHVIDKNDIYIGELVNSHISGRSKQSPLTTFALDLITNKVYKEKDFVTNYKAI
VSPQHKEVRGSTFFIKDKKGNLEGMLCINLDISAYQGVARDLLKLVNLNLEHFIPTAKEPKTVTPQPEEAVEILTSNIQD
IIGQIIDPSLLRHNVHLSQDVKIDIVAKLYEKGVFQLKGAVSKVADILCISEPSVYRYLKKIEADQ

Specific function: Unknown

COG id: COG2964

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yheO [H]

Homologues:

Organism=Escherichia coli, GI87082246, Length=230, Percent_Identity=25.2173913043478, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013559
- ProDom:   PD037769 [H]

Pfam domain/function: PF08348 PAS_6 [H]

EC number: NA

Molecular weight: Translated: 25623; Mature: 25623

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKETLNYWKTVITFLHDVLGDNYEIILHVIDKNDIYIGELVNSHISGRSKQSPLTTFAL
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEHHHHHHHHHCCCCCCCCHHHHHH
DLITNKVYKEKDFVTNYKAIVSPQHKEVRGSTFFIKDKKGNLEGMLCINLDISAYQGVAR
HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCCCCEEEEEECCHHHHHHHHH
DLLKLVNLNLEHFIPTAKEPKTVTPQPEEAVEILTSNIQDIIGQIIDPSLLRHNVHLSQD
HHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC
VKIDIVAKLYEKGVFQLKGAVSKVADILCISEPSVYRYLKKIEADQ
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDKETLNYWKTVITFLHDVLGDNYEIILHVIDKNDIYIGELVNSHISGRSKQSPLTTFAL
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEHHHHHHHHHCCCCCCCCHHHHHH
DLITNKVYKEKDFVTNYKAIVSPQHKEVRGSTFFIKDKKGNLEGMLCINLDISAYQGVAR
HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCCCCEEEEEECCHHHHHHHHH
DLLKLVNLNLEHFIPTAKEPKTVTPQPEEAVEILTSNIQDIIGQIIDPSLLRHNVHLSQD
HHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC
VKIDIVAKLYEKGVFQLKGAVSKVADILCISEPSVYRYLKKIEADQ
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]